DY304819

Overview
NameDY304819
Unique NameDY304819
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length907
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY304819 vs. ExPASy Swiss-Prot
Match: FLA7_ARATH (Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana GN=FLA7 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.723e-59
Identity = 103/147 (70.07%), Postives = 117/147 (79.59%), Query Frame = 3
Query:  297 EHVNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVRTYAGGDYKLNFTDVSGAVHIDSGWXXXXXXXXXXXXDPVALYQVEKVLPPK 737
            E+VNLT+LLSVAGPFHTFL+YL ST V+ETFQNQANNT+EGITIFVPKDDAFK+ K P L+NLT+DQLKQL LFHALPHYYS ++FKNLSQ  PV T+AGG Y L FTDVSG V IDS W            DPVA+YQV +VL P+
Sbjct:   43 ENVNLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNRVLLPE 189          

HSP 2 Score: 41.9726 bits (97), Expect = 2.723e-59
Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 2
Query:  731 PKAIFGTDLPPMPCPGTRLPMSHRPADAPI*SN*TGAPLSPKSFPRN 871
            P+AIFGTD+PPMP P    P+   P+D+P  ++  GA  SPKS  +N
Sbjct:  188 PEAIFGTDVPPMPAPAP-APIVSAPSDSPSVADSEGAS-SPKSSHKN 232          
BLAST of DY304819 vs. ExPASy Swiss-Prot
Match: FLA12_ARATH (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana GN=FLA12 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 8.035e-21
Identity = 59/149 (39.60%), Postives = 82/149 (55.03%), Query Frame = 3
Query:  306 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVRTYAG----GDYKLNFTDVSGAVHIDSGWXXXXXXXXXXXXDPVALYQVEKVLPPKQ 740
            N+T +L  AG F  F+  L+ST V      Q NN+D GITIF P D +F  LK  +L +LT +Q  +L  FH +P Y S ++F+ +S  +P+RT AG    G + LN T     V+I SG               +A+YQV+KVL P+Q
Sbjct:   39 NVTKILEKAGQFTVFIRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLLPQQ 185          
BLAST of DY304819 vs. ExPASy Swiss-Prot
Match: FLA9_ARATH (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana GN=FLA9 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.758e-19
Identity = 55/148 (37.16%), Postives = 81/148 (54.73%), Query Frame = 3
Query:  303 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVRTYAGGD----YKLNFTDVSGAVHIDSGWXXXXXXXXXXXXDPVALYQVEKVLPP 734
            +NLT +L   G F TF++ L  T+V      Q N++ EG+T+F P D+AF++LK  +L  L+ D   +L L+H  P YYS  D   LS  +PVRT A G     Y LNFT  +  +++ +G+             P+A+Y V+ VL P
Sbjct:   38 INLTAILEKGGQFTTFIHLLNITQVGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDL--LSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDMVLLP 183          
BLAST of DY304819 vs. ExPASy Swiss-Prot
Match: FLA6_ARATH (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana GN=FLA6 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.652e-18
Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 3
Query:  303 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVRTYA----GGDYKLNFTD--VSGAVHIDSGWXXXXXXXXXXXXDPVALYQVEKVLPPKQ 740
            +NLT +L     F T +  L +T+V      Q N++D+G+TIF P D+AF  LK  +L +LT  Q  QL L+H +P YYS +D   L   +PVRT A    GG + LNFT    S  V++ +G              P+A+Y V+ VL P++
Sbjct:   37 INLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTIFAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEE 186          

HSP 2 Score: 23.8682 bits (50), Expect = 2.652e-18
Identity = 10/29 (34.48%), Postives = 14/29 (48.28%), Query Frame = 2
Query:  731 PKAIFGTDLPPMPCPGTRLPMSHRPADAP 817
            P+ +FGT   P   P  +   S   AD+P
Sbjct:  184 PEELFGTKTTPTGAPAPKSSTSSSDADSP 212          
BLAST of DY304819 vs. ExPASy Swiss-Prot
Match: FLA13_ARATH (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana GN=FLA13 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.039e-17
Identity = 51/151 (33.77%), Postives = 80/151 (52.98%), Query Frame = 3
Query:  303 VNLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVRTYA-----GGDYKLNFTDVSGAVHIDSGWXXXXXXXXXXXXDPVALYQVEKVLPPKQ 740
            +N+T +L   G F T +  L +T++      Q N++ EG+T+  P D+AF++LK  +L  L+ D   +L L+H  P +Y+  D   LS  +PVRT A     GG Y LNFT     V++ +G              P+A+Y V+ VL P++
Sbjct:   35 INITAILEKGGQFVTLIRLLNTTQIGNQINIQINSSSEGMTVLAPTDNAFQNLKPGTLNKLSPDDQVKLILYHVSPKFYTLEDL--LSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRLSTSLRQERPLAVYVVDMVLLPEE 183          
BLAST of DY304819 vs. ExPASy Swiss-Prot
Match: FLA11_ARATH (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana GN=FLA11 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.560e-16
Identity = 52/148 (35.14%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  306 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDE-GITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFKNLSQMSPVRTYAG----GDYKLNFTDVSGAVHIDSGWXXXXXXXXXXXXDPVALYQVEKVLPP 734
            N+T +L  AG F  F+  L+ST+  +    Q N++   G+T+F P D+AF SLK  +L +L+  Q  QL  FH LP   +   F+ +S  +P+RT AG    G + LN T     V+I +G               +A+YQV++VL P
Sbjct:   36 NITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLP 181          

HSP 2 Score: 21.1718 bits (43), Expect = 6.560e-16
Identity = 7/15 (46.67%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  731 PKAIFGTDLPPMPCP 775
            P A+FG+ + P P P
Sbjct:  181 PLAMFGSSVAPAPAP 195          
BLAST of DY304819 vs. ExPASy Swiss-Prot
Match: FLA10_ARATH (Fasciclin-like arabinogalactan protein 10 OS=Arabidopsis thaliana GN=FLA10 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.343e-12
Identity = 48/146 (32.88%), Postives = 72/146 (49.32%), Query Frame = 3
Query:  306 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVRTYAGGDYKLNFTDVSGAVHIDSGWXXXXXXXXXXXXDPVALYQVEKVLPPKQ 740
            N+T LL  AG   TF N L S+ V++TF++     ++G+T+F P D+AFK+   P L NLTQ ++  L  +HAL  Y      K N   +S + T   G Y L  +     V + +G              PV ++ V+ VL P +
Sbjct:  190 NITGLLEKAG-CKTFANLLVSSGVIKTFES---TVEKGLTVFAPSDEAFKARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSGDEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAE 331          
BLAST of DY304819 vs. ExPASy Swiss-Prot
Match: FLA8_ARATH (Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana GN=FLA8 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.260e-11
Identity = 46/146 (31.51%), Postives = 72/146 (49.32%), Query Frame = 3
Query:  306 NLTDLLSVAGPFHTFLNYLESTKVLETFQNQANNTDEGITIFVPKDDAFKSLKKPSLANLTQDQLKQLCLFHALPHYYSFADFK-NLSQMSPVRTYAGGDYKLNFTDVSGAVHIDSGWXXXXXXXXXXXXDPVALYQVEKVLPPKQ 740
            N+T LL  AG   TF N L S+ VL+T+++     ++G+T+F P D+AFK+   P L  LTQ ++  L  +HAL  Y      K N + +S + T   G + L  +     V + +G              PV ++ V+ VL P +
Sbjct:  189 NITGLLEKAG-CKTFANLLVSSGVLKTYESAV---EKGLTVFAPSDEAFKAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSGDEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAE 330          

HSP 2 Score: 21.1718 bits (43), Expect = 2.260e-11
Identity = 11/31 (35.48%), Postives = 13/31 (41.94%), Query Frame = 2
Query:  731 PKAIFGTDLPPMPCPGTR--LPMSHRPADAP 817
            P  +FG    P P P        +  PADAP
Sbjct:  328 PAELFGKSKSPSPAPAPEPVTAPTPSPADAP 358          
The following BLAST results are available for this feature:
BLAST of DY304819 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
FLA7_ARATH2.723e-5970.07Fasciclin-like arabinogalactan protein 7 OS=Arabid... [more]
FLA12_ARATH8.035e-2139.60Fasciclin-like arabinogalactan protein 12 OS=Arabi... [more]
FLA9_ARATH5.758e-1937.16Fasciclin-like arabinogalactan protein 9 OS=Arabid... [more]
FLA6_ARATH2.652e-1837.50Fasciclin-like arabinogalactan protein 6 OS=Arabid... [more]
FLA13_ARATH7.039e-1733.77Fasciclin-like arabinogalactan protein 13 OS=Arabi... [more]
FLA11_ARATH6.560e-1635.14Fasciclin-like arabinogalactan protein 11 OS=Arabi... [more]
FLA10_ARATH2.343e-1232.88Fasciclin-like arabinogalactan protein 10 OS=Arabi... [more]
FLA8_ARATH2.260e-1131.51Fasciclin-like arabinogalactan protein 8 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YM21RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304819 ID=DY304819; Name=DY304819; organism=Citrus clementina; type=EST; length=907bp
CACCATTTCTCACTCTCTCTCTCTCCCTGCCTCTGTCTCTGAATTCCACT
TAGTCAGACGTTTGGTGAGCTGGGTTTTTCAGAAACTTGTTTGTGGGTTA
CGGTGTGTGGATTTTGTAAAACAGAATTTGGAGAGTTTGGTCAACTTAGA
AAGCAACATAAAACTTCATGGAAAAAATGGAAGTTTCCATGGCTTTGATG
ATTAGTGCACTATTGCTTTTGTTCTCTTCAGCTAATGCTCAGAAAGCTGC
TAGCCCTCCCACATTCAGTCCAACTCCGGCCCCAGCACCGGCGCCTGAAC
ATGTGAACCTCACTGATTTACTCTCTGTAGCTGGCCCATTCCACACGTTC
CTCAATTACCTTGAGTCCACTAAAGTGCTTGAGACCTTCCAAAACCAAGC
CAACAATACTGACGAAGGCATTACCATCTTTGTGCCAAAAGATGATGCCT
TCAAGTCTCTCAAGAAACCTTCTTTAGCCAATCTCACACAGGATCAGCTT
AAGCAGCTTTGTCTATTCCATGCCTTGCCACATTACTACTCATTTGCTGA
TTTCAAGAACCTTAGCCAAATGAGCCCTGTTCGCACATATGCTGGTGGAG
ATTACAAATTGAACTTCACTGATGTTTCGGGGGCTGTCCATATCGATTCA
GGATGGTCTAGAACCTAAGTTAGCAGCCGCGTGCATTCAACTGACCCTGT
TGCCTTGTACCAAGTTGAAAAAGTCCTTCCCCCAAAGCAATCTTTGGTAC
CGACCTTCCCCCCATGCCCTGCCCCGGCACCCGGCTCCCGATGTCCCACC
GCCCGGCTGACGCCCCCATCTGAAGTAATTGAACGGGGGCTCCGCTTTCC
CCAAAATCCTTCCCCCGGAACAAATTTTTTCCTCCCAGGGAACTACCACC
TGGGGGT
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