DY304823

Overview
NameDY304823
Unique NameDY304823
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length933
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304823 vs. ExPASy Swiss-Prot
Match: WSC4_YEAST (Cell wall integrity and stress response component 4 OS=Saccharomyces cerevisiae GN=WSC4 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.473e-17
Identity = 45/85 (52.94%), Postives = 55/85 (64.71%), Query Frame = 3 
Query:  135 QTYCSSENTGSDFSVVTNIYQSNGACSTTCSGQYAFAIVQWQSCWCSNYIPSSQDDVSNCSQDCPGFPSESCGNEDSGLFGYIQL 389
            Q+ CSS+NT +   V  N +QSNG CS  C+G + FAIVQ   CWCS+  PS+Q  V +CS  CPG+  E CGN D  LFGYI L
Sbjct:   28 QSVCSSQNTATTDGV-RNQFQSNGWCSNNCAG-HQFAIVQGFMCWCSDSEPSTQTSVGDCSGTCPGYGYEDCGNADKDLFGYIYL 110
The following BLAST results are available for this feature:
BLAST of DY304823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
WSC4_YEAST1.473e-1752.94Cell wall integrity and stress response component ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YN03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304823 ID=DY304823; Name=DY304823; organism=Citrus clementina; type=EST; length=933bp
CGACTACATCCCGTTCTAAACACATCACAATTCCCTCGGCGATGAGCGCG
AGGCTACACAATATGCTCCCCTTTCGACGACTACACCTTGGCCTGGCCCT
ATTGGCCGCGGCGCGAGGATCTAATGCCCTCTCACAAACATACTGTTCGA
GCGAAAACACCGGCTCGGACTTTAGCGTTGTCACCAATATTTACCAATCC
AATGGCGCCTGTTCAACAACATGTTCCGGACAATATGCCTTTGCGATTGT
ACAATGGCAGAGTTGTTGGTGTTCCAACTACATTCCTTCGTCACAGGACG
ACGTGAGCAACTGCAGCCAAGACTGTCCTGGATTTCCCTCGGAGAGCTGC
GGTAATGAAGACTCTGGACTTTTCGGATACATTCAGTTGAGCGAGCCATC
TGGTACTGCAGGCGGCGGCGGCGGCGCGATTGCGAGCAGCTCCTCTTCAC
CCAGCCAACAACAAACATCAACAATTATTATCTCATCGCCCTCCCCATCG
CCCACTACCCAGGAGCAAGAAACGAGCATTCCGCCACGCACATCATCCAC
ATCTCCCAGACCGAGCACCACCAGCACTAGCAGACCGCAGACAACCCCGT
CTGCCACACCAGTGACTAGCATAATGGAGACCACCGTCTCCGGCGAGGTC
ATCACACGCACCGTCACCTCCACGCCTACCGTTGTAGTGGGCAATGCCAG
CAATGACAAGGTTGACATCTCACGAAGCGATGGCCTGTCTGGAGGCGCGG
TCGCGGGCATCGTCATCGGAGTTGTTGCGGGCCTGGCCATCTTGGCGATT
GCAACATTCCCTCTCTGGCGAAAGAAGAGGAACCATGGGACAGATGCCGC
CGCTGGAAGTGCCTCCAGAAAAACATTGAAAAGAATGTCCATGTTCTCAG
CAAACCTGGTCTGCTCTCCCGAGGCCCCCAACC
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