DY304835
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_EHRCJ (50S ribosomal protein L25 OS=Ehrlichia canis (strain Jake) GN=rplY PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 7.402e-14 Identity = 60/208 (28.85%), Postives = 95/208 (45.67%), Query Frame = 3 Query: 96 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSP--SRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 713 I A RE G+ + R G IPAVV+ + N D S S ++ LS R S T +++ G VL V + T RI ++ F + D GTE+K++VP++F + C G+K+GG L + +L C I IE+D+S+L G + +SD+ + P ++ K + IS+T +E Sbjct: 9 INASLRENVGTGPARAVRRNGGIPAVVYGK-----NRDSLSVFLSDREFLSKHRSAALS-------------THLIELEIGDKKEY------VLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGVKRGGVLNILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVSDLNLPPEINVVMKEHNPAIVTISSTSME 192
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_EHRRW (50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Welgevonden) GN=rplY PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.267e-13 Identity = 60/198 (30.30%), Postives = 93/198 (46.97%), Query Frame = 3 Query: 111 RECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISAT 704 R G+ S R G IPAVV+ + RSP I ++R+ + S +S L +T +++ G VL + + T RI ++ F + D GTE+K++VP+VF + C G+KKGG L + +L C I IEVD++NL IG + +SD+ + ++ K L IS T Sbjct: 14 RNSVGTGPSRTLRRNGAIPAVVYGK--------HRSPL--SIYLSDREFL-SKYRSAAL-----STHLIELEIGEKKEY------VLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPTLVTISGT 189
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_EHRRG (50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Gardel) GN=rplY PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 6.267e-13 Identity = 60/198 (30.30%), Postives = 93/198 (46.97%), Query Frame = 3 Query: 111 RECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISAT 704 R G+ S R G IPAVV+ + RSP I ++R+ + S +S L +T +++ G VL + + T RI ++ F + D GTE+K++VP+VF + C G+KKGG L + +L C I IEVD++NL IG + +SD+ + ++ K L IS T Sbjct: 14 RNSVGTGPSRTLRRNGAIPAVVYGK--------HRSPL--SIYLSDREFL-SKYRSAAL-----STHLIELEIGEKKEY------VLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPTLVTISGT 189
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_RHOPT (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain TIE-1) GN=rplY PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.396e-12 Identity = 56/195 (28.72%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 96 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 674 ++A R +G + +R GR+P V++ D +SP +S E K++ + + F +T F V+LD K V+P H D +++ F+ G ++V VP+ KG+E PG+K+GG + +++ PAE+I IE DVS LDIG + +SDI + K +S+++ Sbjct: 7 LKATARPKSGKGAARAERRAGRVPGVIYG--------DNQSPLP---ISVEEKELRLRILAGR---FLTTVF----------DVVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSVSRDD 177
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_RHOPA (50S ribosomal protein L25 OS=Rhodopseudomonas palustris GN=rplY PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 1.396e-12 Identity = 56/195 (28.72%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 96 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 674 ++A R +G + +R GR+P V++ D +SP +S E K++ + + F +T F V+LD K V+P H D +++ F+ G ++V VP+ KG+E PG+K+GG + +++ PAE+I IE DVS LDIG + +SDI + K +S+++ Sbjct: 7 LKATARPKSGKGAARAERRAGRVPGVIYG--------DNQSPLP---ISVEEKELRLRILAGR---FLTTVF----------DVVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGGTFNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSVSRDD 177
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_EHRCR (50S ribosomal protein L25 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rplY PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.381e-12 Identity = 58/208 (27.88%), Postives = 98/208 (47.12%), Query Frame = 3 Query: 96 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 713 I A R+ G+ S R G IPAV++ + R S S +S ++ S +S L +T +++ +D+ K VL V + T RI ++ F + D GTE+K++VP++F + C G+K+GG L + +L C + I IE+D+S L G + +SD+++ P + K + IS+ E Sbjct: 9 INASLRKNVGTGPSRALRLSGEIPAVIYGKG-------RDSLS----ISLSNREFVSKYRSAAL-----STHLIELE--------IDNKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGGVLNILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPAIVTISSASTE 192
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_RHOPS (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain BisB5) GN=rplY PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.049e-12 Identity = 56/195 (28.72%), Postives = 92/195 (47.18%), Query Frame = 3 Query: 96 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 674 ++A R +G + +R GR+P V++ D + P +S E K++ + + F +T F V+LD K V+P H D +++ F+ G ++V VP+ KG+ES PG+K+GG + ++ PAE I IE DVS LDIG + +SDI + K +S+ + Sbjct: 7 LKATARPKSGKGAARAERRAGRVPGVIYG--------DNQPPLP---ISVEDKELRLRILAGR---FLTTVF----------DVVLDGKKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLHLKGLESAPGVKRGGTFNIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDIALPNGVKSVSRED 177
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_ERYLH (50S ribosomal protein L25 OS=Erythrobacter litoralis (strain HTCC2594) GN=rplY PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.049e-12 Identity = 53/181 (29.28%), Postives = 89/181 (49.17%), Query Frame = 3 Query: 93 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 635 T+ A RE G S R +GR+PAV++ + P+ ++ E K + +K + F ++ ++I G +V + LP V + R + F G +++V VPVVF E+ PGLKKGG L +R L+ +C + I +IE+DV+ ++GD + +S+I Sbjct: 6 TLPAEARERAGKGASRALRREGRVPAVIYG--------GKEEPT---MIHVEEKLL---IKQLMTGHFMNSIVEIEI---GGKTV-----RTLPKDVALHPVSDRPEHADFFRLAKGGKIEVSVPVVFMNEEASPGLKKGGVLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISEI 164
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_RHOP2 (50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain HaA2) GN=rplY PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.543e-11 Identity = 54/194 (27.84%), Postives = 92/194 (47.42%), Query Frame = 3 Query: 99 QAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 674 +A R +G + +R GR+P V++ D + P +S E K + +++ F +T F V+LD K V+P H D +++ F+ +G +++ VP+ KG+ES PG+K+GG + ++ PA+ I IE DVS LDIG + +SDI + K +S+ + Sbjct: 8 KATARPKSGKGAARAERRAGRVPGVIYG--------DNKPPLP---ISVEDKDLRLRIQAGR---FLTTIF----------DVVLDGQKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLHLKGLESAPGVKRGGTFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGVKSVSRED 177
BLAST of DY304835 vs. ExPASy Swiss-Prot
Match: RL25_MESSB (50S ribosomal protein L25 OS=Mesorhizobium sp. (strain BNC1) GN=rplY PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.439e-11 Identity = 58/193 (30.05%), Postives = 90/193 (46.63%), Query Frame = 3 Query: 81 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDQNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLL------DSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 641 SY T +A RE G + R G+IPAV++ D++ P S+ LP+ F L+I AG + + + +VLP D G +++ F+ T + V+VPV F E PG+K+GG L +R +++ CPA I IEVD++ LDIGD V +S +++ Sbjct: 4 SYELTAEA--RERVGKGSARAIRRNGKIPAVIYG--------DKQPPL-----------------SITLPY--KEVF-LRIHAGGFRTTVATIDLNGEKIQVLPKDYQLDPVRGFAMHVDFLRVGKNTVVTVNVPVHFINDEKAPGIKRGGVLNIVRHEVEFTCPANAIPDFIEVDLTGLDIGDSVHISAVKL 166 The following BLAST results are available for this feature:
BLAST of DY304835 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304835 ID=DY304835; Name=DY304835; organism=Citrus clementina; type=EST; length=915bpback to top |