DY304846
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: SK2L2_MOUSE (Superkiller viralicidic activity 2-like 2 OS=Mus musculus GN=Skiv2l2 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 3.664e-75 Identity = 126/167 (75.45%), Postives = 143/167 (85.63%), Query Frame = 1 Query: 307 RIVVHTLETHEGCTHEVAIPPCHEYAPLVQSSQEPAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 R+ V ++ET EGCTHEVA+P +Y PL + AK+Y FILD FQ+EAI C+DN QSVLVSAHTSAGKTV AEYAIAL+L+ KQRVI+T+PIKALSNQKYRE EEF DVGL+TGDVTINPTASCL+MTTEILR+MLYRGSEVMREV WVIFDEIHY+RD ERGV Sbjct: 96 RVKVQSVETVEGCTHEVALPADEDYIPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGV 262 HSP 2 Score: 48.521 bits (114), Expect = 3.664e-75 Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 2 Query: 794 KRGVFVWEKTAIPPPEHLHYVFLSATIPNAPQFPE 898 +RGV VWE+T I P+++HYVFLSATIPNA QF E Sbjct: 259 ERGV-VWEETIILLPDNVHYVFLSATIPNARQFAE 292
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: SK2L2_HUMAN (Superkiller viralicidic activity 2-like 2 OS=Homo sapiens GN=SKIV2L2 PE=1 SV=3) HSP 1 Score: 254.988 bits (650), Expect = 4.779e-75 Identity = 126/167 (75.45%), Postives = 143/167 (85.63%), Query Frame = 1 Query: 307 RIVVHTLETHEGCTHEVAIPPCHEYAPLVQSSQEPAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 R+ V ++ET EGCTHEVA+P +Y PL + AK+Y FILD FQ+EAI C+DN QSVLVSAHTSAGKTV AEYAIAL+L+ KQRVI+T+PIKALSNQKYRE EEF DVGL+TGDVTINPTASCL+MTTEILR+MLYRGSEVMREV WVIFDEIHY+RD ERGV Sbjct: 98 RVKVQSVETVEGCTHEVALPAEEDYLPLKPRVGKAAKEYPFILDAFQREAIQCVDNNQSVLVSAHTSAGKTVCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQDVGLMTGDVTINPTASCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDSERGV 264 HSP 2 Score: 48.521 bits (114), Expect = 4.779e-75 Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 2 Query: 794 KRGVFVWEKTAIPPPEHLHYVFLSATIPNAPQFPE 898 +RGV VWE+T I P+++HYVFLSATIPNA QF E Sbjct: 261 ERGV-VWEETIILLPDNVHYVFLSATIPNARQFAE 294
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: MTR4_CAEEL (mRNA transport homolog 4 OS=Caenorhabditis elegans GN=mtr-4 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 1.379e-71 Identity = 136/212 (64.15%), Postives = 160/212 (75.47%), Query Frame = 1 Query: 184 DESSKKRSH--EEDDTEHAKKPKXXXXXXXXXXXXXXXXXXXXRIVVHTLET-HEGCTHEVAIPPCHEYAPLVQSS-QEPAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 DE++ KR+ EE++ E A+ I+VHT+ T +E CTHEVAIPP E+A L ++S EPAK Y F LD FQK+AILCIDN QSVLVSAHTSAGKTVVA YAIA L+ KQRVIYT+PIKALSNQKYRE EEF DVGL+TGDVT+NP ASCL+MTTEILR+MLYRGSE+M+EVGWV++DEIHY+RDKERGV Sbjct: 60 DEATSKRARVEEEEEVEEARMEN---------------------IIVHTIRTDNENCTHEVAIPPNAEFAELRENSGTEPAKYYPFQLDAFQKQAILCIDNNQSVLVSAHTSAGKTVVATYAIAKCLREKQRVIYTSPIKALSNQKYRELEEEFKDVGLMTGDVTLNPDASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGV 250 HSP 2 Score: 36.5798 bits (83), Expect = 1.379e-71 Identity = 19/35 (54.29%), Postives = 25/35 (71.43%), Query Frame = 2 Query: 794 KRGVFVWEKTAIPPPEHLHYVFLSATIPNAPQFPE 898 +RGV VWE+T I +++ FLSATIPNA QF + Sbjct: 247 ERGV-VWEETIILMSKNIKQAFLSATIPNARQFAQ 280
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: MTR4_YEAST (ATP-dependent RNA helicase DOB1 OS=Saccharomyces cerevisiae GN=MTR4 PE=1 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 1.631e-66 Identity = 114/154 (74.03%), Postives = 130/154 (84.42%), Query Frame = 1 Query: 349 HEVAIPPCHEYAPLVQSSQ-EPAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 H+VA+PP ++Y P+ + + A+ Y F LDPFQ AI CID +SVLVSAHTSAGKTVVAEYAIA SLKNKQRVIYT+PIKALSNQKYRE EF DVGL+TGD+TINP A CL+MTTEILR+MLYRGSEVMREV WVIFDE+HY+RDKERGV Sbjct: 121 HQVALPPNYDYTPIAEHKRVNEARTYPFTLDPFQDTAISCIDRGESVLVSAHTSAGKTVVAEYAIAQSLKNKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDKERGV 274 HSP 2 Score: 43.5134 bits (101), Expect = 1.631e-66 Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 2 Query: 794 KRGVFVWEKTAIPPPEHLHYVFLSATIPNAPQFPE 898 +RGV VWE+T I P+ + YVFLSATIPNA +F E Sbjct: 271 ERGV-VWEETIILLPDKVRYVFLSATIPNAMEFAE 304
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: YDVG_SCHPO (Uncharacterized helicase C6F12.16c OS=Schizosaccharomyces pombe GN=SPAC6F12.16c PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 4.716e-66 Identity = 114/163 (69.94%), Postives = 134/163 (82.21%), Query Frame = 1 Query: 325 LETHEGCTHEVAIPPCHEYAPLVQ--SSQEPAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 +E H+V+IPP ++Y P+ + S PA+ Y F LDPFQ +I CI+ +SVLVSAHTSAGKTVVAEYA+A SL++KQRVIYT+PIKALSNQKYRE EF DVGL+TGDVTINP A+CL+MTTEILR+MLYRGSEVMREV WVIFDEIHY+RDKERGV Sbjct: 161 VELRHQVRHQVSIPPNYDYVPISKHKSPIPPARTYPFTLDPFQAVSIACIERQESVLVSAHTSAGKTVVAEYAVAQSLRDKQRVIYTSPIKALSNQKYRELLAEFGDVGLMTGDVTINPDATCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDKERGV 323 HSP 2 Score: 45.0542 bits (105), Expect = 4.716e-66 Identity = 23/35 (65.71%), Postives = 27/35 (77.14%), Query Frame = 2 Query: 794 KRGVFVWEKTAIPPPEHLHYVFLSATIPNAPQFPE 898 +RGV VWE+T I P+ H+VFLSATIPNA QF E Sbjct: 320 ERGV-VWEETIILLPDKSHFVFLSATIPNAMQFAE 353
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: YE02_SCHPO (Uncharacterized helicase C17H9.02 OS=Schizosaccharomyces pombe GN=SPAC17H9.02 PE=1 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 6.653e-62 Identity = 106/155 (68.39%), Postives = 129/155 (83.23%), Query Frame = 1 Query: 349 HEVAIPPCHEYAPLVQS--SQEPAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 H+V +P ++Y PL + S PAK Y F LDPFQ AI C++ ++SVLVSAHTSAGKTV+AEYAIA +LKN+QRVIYT+PIK+LSNQKYRE EF DVGL+TGDV+INP+ASCLIMTTEILR MLY+ SE+M E+ WVIFDE+HY+RDK+RGV Sbjct: 96 HKVVVPDDYDYIPLNKHIPSDPPAKTYPFELDPFQSTAIKCVERMESVLVSAHTSAGKTVIAEYAIAQALKNRQRVIYTSPIKSLSNQKYRELLSEFGDVGLMTGDVSINPSASCLIMTTEILRAMLYKNSEIMHEIAWVIFDEVHYMRDKDRGV 250 HSP 2 Score: 39.6614 bits (91), Expect = 6.653e-62 Identity = 19/32 (59.38%), Postives = 25/32 (78.12%), Query Frame = 2 Query: 797 RGVFVWEKTAIPPPEHLHYVFLSATIPNAPQF 892 RGV VWE+T I P+ + ++FLSAT+PNA QF Sbjct: 248 RGV-VWEETLILLPDAIRFIFLSATLPNALQF 278
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: SKIV2_HUMAN (Helicase SKI2W OS=Homo sapiens GN=SKIV2L PE=1 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 3.708e-50 Identity = 89/134 (66.42%), Postives = 110/134 (82.09%), Query Frame = 1 Query: 406 EPAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 +PA Q+ F D FQK+AIL ++ SV V+AHTSAGKTVVAEYAIAL+ K+ R IYT+PIKALSNQK+R+F F DVGL+TGDV ++P ASCLIMTTEILR+MLY GS+V+R++ WVIFDE+HY+ D ERGV Sbjct: 302 QPAFQWAFEPDVFQKQAILHLERHDSVFVAAHTSAGKTVVAEYAIALAQKHMTRTIYTSPIKALSNQKFRDFRNTFGDVGLLTGDVQLHPEASCLIMTTEILRSMLYSGSDVIRDLEWVIFDEVHYINDVERGV 435 HSP 2 Score: 39.2762 bits (90), Expect = 3.708e-50 Identity = 17/37 (45.95%), Postives = 27/37 (72.97%), Query Frame = 2 Query: 788 EIKRGVFVWEKTAIPPPEHLHYVFLSATIPNAPQFPE 898 +++RGV VWE+ I P+H+ + LSAT+PNA +F + Sbjct: 430 DVERGV-VWEEVLIMLPDHVSIILLSATVPNALEFAD 465
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: SKI2_YEAST (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae GN=SKI2 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 4.368e-48 Identity = 87/135 (64.44%), Postives = 112/135 (82.96%), Query Frame = 1 Query: 409 PAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDV--GLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 PA+ + F LD FQKEA+ ++ SV V+AHTSAGKTVVAEYAIA++ +N + IYT+PIKALSNQK+R+F E F DV GLITGDV INP A+CLIMTTEILR+MLYRG++++R+V +VIFDE+HY+ D++RGV Sbjct: 322 PARSWPFELDTFQKEAVYHLEQGDSVFVAAHTSAGKTVVAEYAIAMAHRNMTKTIYTSPIKALSNQKFRDFKETFDDVNIGLITGDVQINPDANCLIMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDQDRGV 456 HSP 2 Score: 36.5798 bits (83), Expect = 4.368e-48 Identity = 16/32 (50.00%), Postives = 23/32 (71.88%), Query Frame = 2 Query: 797 RGVFVWEKTAIPPPEHLHYVFLSATIPNAPQF 892 RGV VWE+ I P+H+ ++ LSAT+PN +F Sbjct: 454 RGV-VWEEVIIMLPQHVKFILLSATVPNTYEF 484
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: YJV3_SCHPO (Uncharacterized helicase C550.03c OS=Schizosaccharomyces pombe GN=SPCC550.03c PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 1.261e-47 Identity = 90/154 (58.44%), Postives = 116/154 (75.32%), Query Frame = 1 Query: 376 EYAPLVQSSQ----------EPAKQYTFILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEFHDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERGV 807 +YA +V SS E A + F LD FQKEAI ++ SV V+AHTSAGKTVVAEYAIAL+ K+ + IYT+PIKALSNQK+R+F +F DVG++TGDV +NP SCL+MTTEILR+MLYRG++++R+V +VIFDE+HY+ D ERGV Sbjct: 252 DYAHVVDSSAPIENFQQLVPEMALDFPFELDNFQKEAIYHLEMGDSVFVAAHTSAGKTVVAEYAIALAQKHMTKAIYTSPIKALSNQKFRDFKHKFEDVGILTGDVQVNPEGSCLLMTTEILRSMLYRGADLIRDVEFVIFDEVHYVNDLERGV 405 HSP 2 Score: 36.1946 bits (82), Expect = 1.261e-47 Identity = 16/35 (45.71%), Postives = 24/35 (68.57%), Query Frame = 2 Query: 788 EIKRGVFVWEKTAIPPPEHLHYVFLSATIPNAPQF 892 +++RGV VWE+ I P H+ + LSAT+PN +F Sbjct: 400 DLERGV-VWEEVIIMLPPHVTLILLSATVPNTKEF 433
BLAST of DY304846 vs. ExPASy Swiss-Prot
Match: HELY_MYCTU (Probable helicase helY OS=Mycobacterium tuberculosis GN=helY PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 6.631e-29 Identity = 58/128 (45.31%), Postives = 86/128 (67.19%), Query Frame = 1 Query: 427 FILDPFQKEAILCIDNLQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVIYTTPIKALSNQKYREFSEEF--HDVGLITGDVTINPTASCLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYLRDKERG 804 F LD FQ+ A ++ VLV A T AGKTVV E+A+ L+L + YTTP+KALSNQK+ + + + +GL+TGD+++N A ++MTTE+LRNMLY S ++ + +V+ DE+H+L D+ RG Sbjct: 16 FSLDDFQQRACSALERGHGVLVCAPTGAGKTVVGEFAVHLALAAGSKCFYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVVVMTTEVLRNMLYADSPALQGLSYVVMDEVHFLADRMRG 143 HSP 2 Score: 29.261 bits (64), Expect = 6.631e-29 Identity = 12/28 (42.86%), Postives = 18/28 (64.29%), Query Frame = 2 Query: 809 VWEKTAIPPPEHLHYVFLSATIPNAPQF 892 VWE+ + P+ + V LSAT+ NA +F Sbjct: 145 VWEEVILQLPDDVRVVSLSATVSNAEEF 172 The following BLAST results are available for this feature:
BLAST of DY304846 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >DY304846 ID=DY304846; Name=DY304846; organism=Citrus clementina; type=EST; length=933bpback to top |