DY304848

Overview
NameDY304848
Unique NameDY304848
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length951
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY304848 vs. ExPASy Swiss-Prot
Match: FUCO2_ARATH (Alpha-L-fucosidase 2 OS=Arabidopsis thaliana GN=At4g34260 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 6.265e-80
Identity = 159/312 (50.96%), Postives = 207/312 (66.35%), Query Frame = 2 
Query:    5 DSTSTTNPLKITFNGPS*LFTDAIPIGNGRLGAMVWGGVPS*TLKLNKDTLWTGVPGDYTNPHAPKALSDVRSLVDSGQYAESTAASVKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKIXXXXXXXXXXXXXXXXXXXNHSYVNGN-NQIIMEGRCPGKRIPPKANAN--------DDPKGIQFSAILEIKISDDRGTNSALEDKKLKVEGSDWAVLLLLASSSFDGTFINPSNSKKEPNSESMNCLPSIRNPI*FQSLTPPLLNEYQKLFS 913
            D    + PLK+TF GPS  +TDAIPIGNGRLGA +WGGV S  L +N+DT+WTGVP DYTN  AP+AL++VR LVD   YAE+T+ +VKL G P+DVYQ++GD+ LEFD SH KY + +YRRELDL TA A+V YSVG V+F+RE F+SNPDQVI+ KI                   +HS  N   NQI+M G C  KR+P     +        DD KG+QF++ILE+++S+  G+ S+L  KKL VE +DWAVLLL ASS+FDG F  P +SK +P  E +N + S++    +  L    L +YQKLF+
Sbjct:   44 DGQDLSRPLKLTFGGPSRNWTDAIPIGNGRLGATIWGGVSSEILNINEDTIWTGVPADYTNQKAPEALAEVRRLVDERNYAEATSEAVKLSGQPSDVYQIVGDLNLEFDSSHRKYTQASYRRELDLETAVAKVSYSVGAVDFSREFFASNPDQVIIAKIYASKPGSLSFKVSFDSELHHHSETNPKANQILMRGSCRPKRLPVNLKKSINATNIPYDDHKGLQFASILEVRVSNG-GSVSSLGGKKLSVEKADWAVLLLAASSNFDGPFTMPVDSKIDPAKECVNRISSVQK-YSYSDLYARHLGDYQKLFN 353
The following BLAST results are available for this feature:
BLAST of DY304848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FUCO2_ARATH6.265e-8050.96Alpha-L-fucosidase 2 OS=Arabidopsis thaliana GN=At... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAQ9YO07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY304848 ID=DY304848; Name=DY304848; organism=Citrus clementina; type=EST; length=951bp
CGCTGACAGTACTTCTACTACTAACCCGTTAAAGATCACGTTCAACGGGC
CATCCTAGCTCTTCACCGATGCAATTCCGATCGGCAATGGCCGGCTTGGA
GCCATGGTGTGGGGCGGCGTTCCCTCTTAAACTCTAAAGCTCAACAAAGA
CACACTATGGACGGGAGTTCCAGGGGACTATACCAACCCACATGCTCCAA
AGGCTTTATCAGATGTGAGAAGTCTCGTGGATAGTGGCCAATATGCTGAA
TCTACTGCTGCATCAGTCAAGTTGTTTGGACATCCTGCAGATGTTTACCA
ACTTCTTGGGGATATCGAACTAGAATTTGATGATTCGCATCTTAAGTATG
CTGAAGAAACATATCGAAGAGAGCTGGACTTAAATACTGCAACAGCCCGA
GTGAAATATTCTGTGGGAAATGTTGAATTCACCAGAGAACATTTTTCTTC
TAATCCTGACCAAGTCATTGTGACAAAGATTTCTGGAAGTGAATCTGGGT
CTTTATCCTTTAGTGTATCACTGGACAGTCTGTTAGATAATCATTCTTAT
GTAAATGGAAACAATCAGATTATAATGGAAGGACGTTGCCCTGGAAAAAG
AATACCACCAAAAGCAAATGCAAATGATGATCCAAAGGGAATTCAATTTT
CTGCAATTCTTGAGATAAAGATTAGTGATGATAGAGGCACGAATTCTGCC
CTAGAGGACAAGAAGTTGAAAGTTGAAGGTTCGGATTGGGCTGTTTTACT
TCTATTGGCTTCATCTTCATTTGATGGAACATTCATCAATCCTTCAAATT
CTAAAAAGGAACCCAACTCTGAGTCTATGAATTGCTTGCCATCAATCAGA
AACCCTATCTAATTCCAATCTTTAACCCCCCCCCTTTTGAATGAATATCA
AAAGCTTTTTTCCCCGTGGCCCAATTCACCTTTTCAAGAAACCTTCAAGG
A
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