DY304920 | Citrus Genome Database

Overview


Name	DY304920
Unique Name	DY304920
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1267

Libraries


Library Name	Type
PhII-III-Vesicles1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
DY304920_ssr138	microsatellite	DY304920_ssr138:138..149.	BLAST: Citrus ESTs to Prunus persica proteins V1

Homology

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 5.961e-79
Identity = 85/102 (83.33%), Postives = 91/102 (89.22%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T+G FL RKVSL+   LY+VAQCLGAICGCGFVK FQ+S Y RYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLP
Sbjct:  106 INPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 207

HSP 2 Score: 121.709 bits (304), Expect = 5.961e-79
Identity = 57/63 (90.48%), Postives = 58/63 (92.06%), Query Frame = -1

Query:  410 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 598
            PITGTGINPARSFGAAVIYN EKAWDDQWIFWVGP IGA  AAFYHQ+ILRAAAIKALGSF S
Sbjct:  221 PITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALGSFGS 283

HSP 3 Score: 34.6538 bits (78), Expect = 5.961e-79
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  207 PIGFAVFMVHLATIP 221

HSP 4 Score: 26.5646 bits (57), Expect = 5.961e-79
Identity = 10/19 (52.63%), Postives = 11/19 (57.89%), Query Frame = -1

Query:  923 VKCTAGFFGGHFKPGWNIG 979
            V CTAG  GGH  P   +G
Sbjct:   95 VYCTAGISGGHINPAVTVG 113

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.487e-74
Identity = 79/102 (77.45%), Postives = 85/102 (83.33%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T G FLGRKVSL+ A LYM+AQC GAICG G  K FQ S YNRYGGG N ++DGYNKGT LGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLP
Sbjct:  108 INPAVTFGLFLGRKVSLVRALLYMIAQCAGAICGAGLAKGFQKSFYNRYGGGVNTVSDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 209

HSP 2 Score: 122.094 bits (305), Expect = 8.487e-74
Identity = 54/65 (83.08%), Postives = 60/65 (92.31%), Query Frame = -1

Query:  404 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 598
            P+TGTGINPARSFG AVI+N +KAWDDQWI+WVGPF+GA VAA YHQYILR +AIKALGSFRSNA
Sbjct:  223 PVTGTGINPARSFGPAVIFNNDKAWDDQWIYWVGPFVGAAVAAIYHQYILRGSAIKALGSFRSNA 287

HSP 3 Score: 34.6538 bits (78), Expect = 8.487e-74
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  209 PIGFAVFMVHLATIP 223

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP27_ARATH (Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 8.492e-74
Identity = 77/102 (75.49%), Postives = 84/102 (82.35%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T G FL RKVSL+ A  YM+AQCLGAICG GFVK F  + YN  GGGAN +ADGY+KGT LGAEIIGTFVLVYTVFSATDPKRSARDSH+PVLAPLP
Sbjct:   99 INPAVTFGLFLARKVSLVRALGYMIAQCLGAICGVGFVKAFMKTPYNTLGGGANTVADGYSKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLP 200

HSP 2 Score: 127.872 bits (320), Expect = 8.492e-74
Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = -1

Query:  404 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 598
            PITGTGINPARSFGAAVIYN EKAWDDQWIFWVGPF+GA  AA YHQYILRA+AIKALGSFRSNA
Sbjct:  214 PITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPFLGALAAAAYHQYILRASAIKALGSFRSNA 278

HSP 3 Score: 34.6538 bits (78), Expect = 8.492e-74
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  200 PIGFAVFMVHLATIP 214

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.014e-73
Identity = 80/102 (78.43%), Postives = 88/102 (86.27%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T G FL RKVSL+ A LY++AQCLGAICG G VK FQ++ Y RYGGGANEL+DGY+KGTGL AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP
Sbjct:  110 INPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 211

HSP 2 Score: 115.546 bits (288), Expect = 1.014e-73
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = -1

Query:  404 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 598
            PITGTGINPARS GAAVIYNK+KAWDDQWIFWVGP IGA +AA YHQY+LRA+A K LGS+RSNA
Sbjct:  225 PITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSNA 288

HSP 3 Score: 34.6538 bits (78), Expect = 1.014e-73
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  211 PIGFAVFMVHLATIP 225

HSP 4 Score: 25.409 bits (54), Expect = 1.014e-73
Identity = 10/19 (52.63%), Postives = 10/19 (52.63%), Query Frame = -1

Query:  923 VKCTAGFFGGHFKPGWNIG 979
            V CTAG  GGH  P    G
Sbjct:   99 VYCTAGISGGHINPAVTFG 117

HSP 5 Score: 22.7126 bits (47), Expect = 1.014e-73
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = -3

Query:  984 GGVGLFGLRLALWGPIFL 1037
            GGVG+ G+  A  G IF+
Sbjct:   80 GGVGILGIAWAFGGMIFI 97

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.014e-73
Identity = 80/102 (78.43%), Postives = 88/102 (86.27%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T G FL RKVSL+ A LY++AQCLGAICG G VK FQ++ Y RYGGGANEL+DGY+KGTGL AEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP
Sbjct:  111 INPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 212

HSP 2 Score: 115.546 bits (288), Expect = 1.014e-73
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = -1

Query:  404 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 598
            PITGTGINPARS GAAVIYNK+KAWDDQWIFWVGP IGA +AA YHQY+LRA+A K LGS+RSNA
Sbjct:  226 PITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSNA 289

HSP 3 Score: 34.6538 bits (78), Expect = 1.014e-73
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  212 PIGFAVFMVHLATIP 226

HSP 4 Score: 25.409 bits (54), Expect = 1.014e-73
Identity = 10/19 (52.63%), Postives = 10/19 (52.63%), Query Frame = -1

Query:  923 VKCTAGFFGGHFKPGWNIG 979
            V CTAG  GGH  P    G
Sbjct:  100 VYCTAGISGGHINPAVTFG 118

HSP 5 Score: 22.7126 bits (47), Expect = 1.014e-73
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = -3

Query:  984 GGVGLFGLRLALWGPIFL 1037
            GGVG+ G+  A  G IF+
Sbjct:   81 GGVGILGIAWAFGGMIFI 98

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 1.875e-73
Identity = 78/102 (76.47%), Postives = 88/102 (86.27%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T G FL RKVSL+ A LY+VAQCLGAICG G VK FQ++ ++RYGGGAN LA GY++GTGLGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLP
Sbjct:  111 INPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 212

HSP 2 Score: 123.25 bits (308), Expect = 1.875e-73
Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = -1

Query:  404 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 598
            P+TGTGINPARS GAAVIYNK+K WDD WIFWVGP +GA +AAFYHQYILRA AIKALGSFRSNA
Sbjct:  226 PVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALGSFRSNA 290

HSP 3 Score: 34.6538 bits (78), Expect = 1.875e-73
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  212 PIGFAVFMVHLATIP 226

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.886e-73
Identity = 81/102 (79.41%), Postives = 89/102 (87.25%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T G FL RKVSLI A LY++AQCLGAICG G VK FQ+S Y RYGGGANEL+DGY+KGTGLGAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLP
Sbjct:  110 INPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLP 211

HSP 2 Score: 114.005 bits (284), Expect = 2.886e-73
Identity = 53/65 (81.54%), Postives = 58/65 (89.23%), Query Frame = -1

Query:  404 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 598
            PITGTGINPARS G AVIYNK+KAWDDQWIFWVGP IGA +AA YHQY+LRA+A K LGS+RSNA
Sbjct:  225 PITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSYRSNA 288

HSP 3 Score: 34.6538 bits (78), Expect = 2.886e-73
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  211 PIGFAVFMVHLATIP 225

HSP 4 Score: 25.409 bits (54), Expect = 2.886e-73
Identity = 10/19 (52.63%), Postives = 10/19 (52.63%), Query Frame = -1

Query:  923 VKCTAGFFGGHFKPGWNIG 979
            V CTAG  GGH  P    G
Sbjct:   99 VYCTAGISGGHINPAVTFG 117

HSP 5 Score: 20.4014 bits (41), Expect = 2.886e-73
Identity = 8/17 (47.06%), Postives = 11/17 (64.71%), Query Frame = -3

Query:  984 GVGLFGLRLALWGPIFL 1034
            GVG+ G+  A  G IF+
Sbjct:   81 GVGILGIAWAFGGMIFI 97

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.008e-73
Identity = 79/102 (77.45%), Postives = 87/102 (85.29%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T G FL RKVSL+ A LY+VAQCLGAICG G VK FQ++ +NRYGGGAN LA GY+KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLP
Sbjct:  111 INPAVTFGLFLARKVSLVRAILYIVAQCLGAICGVGLVKAFQSAYFNRYGGGANTLAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 212

HSP 2 Score: 120.939 bits (302), Expect = 4.008e-73
Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = -1

Query:  404 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 598
            PITGTGINPARS GAAVI+N EKAW + WIFWVGPF+GA +AAFYHQYILRA AIKALGSFRSNA
Sbjct:  226 PITGTGINPARSIGAAVIFNNEKAWHNHWIFWVGPFVGAAIAAFYHQYILRAGAIKALGSFRSNA 290

HSP 3 Score: 34.6538 bits (78), Expect = 4.008e-73
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  212 PIGFAVFMVHLATIP 226

HSP 4 Score: 22.3274 bits (46), Expect = 4.008e-73
Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = -3

Query:  984 GGVGLFGLRLALWGPIFL 1037
            GGVG+ G+  A  G IF+
Sbjct:   81 GGVGVLGIAWAFGGMIFI 98

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.028e-73
Identity = 76/102 (74.51%), Postives = 87/102 (85.29%), Query Frame = -2

Query:  640 LNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 945
            +N   T G FL RKVSL+ A LYMVAQCLGA+CG G VK FQ++ ++RYGGGAN LA GY++G GLGAEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLP
Sbjct:  113 INPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 214

HSP 2 Score: 122.479 bits (306), Expect = 7.028e-73
Identity = 54/65 (83.08%), Postives = 59/65 (90.77%), Query Frame = -1

Query:  404 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRSNA 598
            P+TGTGINPARS GAAV+YNK+K WDD WIFWVGP +GA +AAFYHQYILRA AIKALGSFRSNA
Sbjct:  228 PVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALGSFRSNA 292

HSP 3 Score: 34.6538 bits (78), Expect = 7.028e-73
Identity = 15/15 (100.00%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGFAVFMVHLATIP
Sbjct:  214 PIGFAVFMVHLATIP 228

[Close]

BLAST of DY304920 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.840e-71
Identity = 86/137 (62.77%), Postives = 97/137 (70.80%), Query Frame = -2

Query:  640 GGPFWASVGPLGAYFPF------LLNAQPVFLVDILNRVGTLGTFLGRKVSLIEAFLYMVAQCLGAICGCGFVKLFQNS*YNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLP 1032
            GG   ASVG LG  + F      L+          +N   T G FL  KVSL+ A  YMVAQCLGA CG G VK+FQ++ YNRYGGGAN L+DGYN G G+GAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLP
Sbjct:   70 GGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLP 206

HSP 2 Score: 118.627 bits (296), Expect = 2.840e-71
Identity = 52/63 (82.54%), Postives = 58/63 (92.06%), Query Frame = -1

Query:  410 PITGTGINPARSFGAAVIYNKEKAWDDQWIFWVGPFIGAFVAAFYHQYILRAAAIKALGSFRS 598
            PITGTGINPARSFGAAVIYN +KAWDDQWIFWVGPF+GA +AAFYHQ++LRA A+KA GS RS
Sbjct:  220 PITGTGINPARSFGAAVIYNNQKAWDDQWIFWVGPFVGAAIAAFYHQFVLRAGAMKAYGSVRS 282

HSP 3 Score: 33.4982 bits (75), Expect = 2.840e-71
Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = -3

Query:  597 PIGFAVFMVHLATIP 641
            PIGF+VFMVHLATIP
Sbjct:  206 PIGFSVFMVHLATIP 220

The following BLAST results are available for this feature:

BLAST of DY304920 vs. ExPASy Swiss-Prot

BLAST of DY304920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89


Match Name	E-value	Identity	Description
PIP24_ARATH	5.961e-79	83.33	Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ...	[more]
PIP27_MAIZE	8.487e-74	77.45	Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1	[more]
PIP27_ARATH	8.492e-74	75.49	Aquaporin PIP2-7 OS=Arabidopsis thaliana GN=PIP2-7...	[more]
PIP24_MAIZE	1.014e-73	78.43	Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1	[more]
PIP23_MAIZE	1.014e-73	78.43	Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1	[more]
PIP21_MAIZE	1.875e-73	76.47	Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2	[more]
PIP22_ORYSJ	2.886e-73	79.41	Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j...	[more]
PIP21_ORYSJ	4.008e-73	77.45	Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j...	[more]
PIP22_MAIZE	7.028e-73	74.51	Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1	[more]
PIP26_ARATH	2.840e-71	62.77	Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ...	[more]

Pages

Properties


Property Name	Value
Genbank description	KN0AAH1BB03RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY304920 ID=DY304920; Name=DY304920; organism=Citrus clementina; type=EST; length=1267bp
GTTTTTTTTTACAAAAAGGTCATAGTTTTATTCACTAGAGTTGGGGATTA
ATTAACATTAACAACATAAATACACCACTTGAAATAAAGAAAAAGGAAAG
GATAAGAAAAATATAGAGAAATAGGATATATAAAAAACACCACCACCACT
TATAAACACACCCAAAGAAAAAAATTAAAATGGGATACCAAAATCCACCC
TTACACATAGATAAAGCATAGGCATAAAATGCATAATGTTCAAATATCTA
CAATTCAATAGCCCTCTAATTCAGCTCAAATTCAATGGCCCTCTAAAGAG
CTTGAAAAGAGATTTCTTAAAGGGCCTTCGTAACAGACTTGCACTCCTGA
TCATGCTGTAAATTTTTCACCTTGGAAGCACCAGACATCATATTTAAAGC
TTAAGCATTGCTCCTGAAGGATCCAAGAGCCTTAATGGCTGCTGCCCTGA
GAATGTATTGGTGGTAGAATGCAGCAACGAAAGCTCCAATGAATGGTCCA
ACCCAGAAGATCCATTGGTCATCCCAGGCTTTCTCCTTGTTGTAGATCAC
AGCAGCTCCAAAACTCCTAGCTGGGTTGATGCCGGTTCCGGTGATGGGGG
ATGGTGGCCAAGTGAACCATGAACACAGCAAACCCAATGGGGGAGTGGTG
CCAAGACCGGAACATGGGAGTCTCTTGCGCTCCTCTTAGGATCAGTGGCA
GAGAAAACAGTGTAGACAAGAACGAAAGTACCGATGATCTCAGCACCCAG
TCCGGTGCCCTTGTTGTATCCATCAGCTAGCTCATTGGCCCCACCTCCAT
ACCTGTTGTATTATGAATTTTGGAAAAGCTTCACAAACCCACAACCACAG
ATTGCACCCAAGCACTGTGCTACCATGTACAAAAAAGCCTCGATGAGCGA
CACCTTGCGCCCCAAGAACGTTCCCAATGTTCCAACCCGGTTTAAAATGT
CCACCAAAAAAACCGGCTGTGCATTTAACAAAAAAGGAAAATAGGCCCCC
AAAGGGCCAACCGAAGCCCAAAAAGGCCCACCCCCCCAAACTGAATCGGA
ATTCAAGGTTGGAAATCTGTTCCGGCCCTTTGGAACCCAATCAAAATAAA
AAAAACGGTAACCATAAAAAAAAAAAAAAACCGTTTAGCGATTAAAACCC
AAAAACATATTACCCCCCTCTTGATAAAAAGAACCCACATTTTTCCCCCC
TACCCCCCTCCCGAAAAAACCTAAATCTCGCCGCGGCGCCCCCCCGGGGG
GGGGAGAGGGGGGGGGG