DY304940
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADS3_ARATH (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana GN=ADS3 PE=2 SV=2) HSP 1 Score: 307.375 bits (786), Expect = 9.371e-89 Identity = 136/196 (69.39%), Postives = 162/196 (82.65%), Query Frame = 1 Query: 232 YGRILLSDVLVKRRRSL-FSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 Y RI+LSDVLVK++ + + R W ++D VVL+MHLL+L APF F W ++ VAFGLY+VTGLLGITLSFHRNLSH++FKLPKWLEYLFAYCG Q+LQGNPIDWVSTHRYHHQFCDS+RDPHSP++GFWFSHM+W+FD +++ +RCG PNNVGDLEKQPFYRFLR+TYILHP+ FPFIVWG G Sbjct: 75 YRRIMLSDVLVKKKEKVVWWEREWKAMDFGAVAVVLSMHLLSLLAPFQFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTNTITQRCGEPNNVGDLEKQPFYRFLRTTYILHPLALAVALYAMGGFPFIVWGMG 270 HSP 2 Score: 42.743 bits (99), Expect = 9.371e-89 Identity = 24/56 (42.86%), Postives = 27/56 (48.21%), Query Frame = 3 Query: 897 TWLVNSAWHVGGKQAWNTGRFAPEQMGGWHYLHFRKKVGTTTNQAFPKIPRKHGLE 1064 TWLVNSA HV GKQAWNTG + W G N + +HGLE Sbjct: 280 TWLVNSACHVWGKQAWNTGDLS---KNNWWVAALAFGEGWHNNHHAFEFSARHGLE 332
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADS32_ARATH (Probable lipid desaturase ADS3.2, chloroplastic OS=Arabidopsis thaliana GN=ADS3.2 PE=2 SV=3) HSP 1 Score: 228.024 bits (580), Expect = 4.150e-62 Identity = 105/193 (54.40%), Postives = 134/193 (69.43%), Query Frame = 1 Query: 238 RILLSDVLVKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 R LLS+V+V R + F R+W S D+S + + HLL+L APF F+W + V L + G+ ITLS+HRNLSHRSF LPKWLEYLFAY GV + QG+PI+WVS HRYHH+ C+++RDPHSP +GFWFSHM+W+FD S+LE CGG NV DL +QPFYRFL+ T +LH + P +VWG G Sbjct: 71 RRLLSEVVVVRTKRSFWERSWTSWDVSKLVIFVGTHLLSLLAPFYFSWEAFWVFPWLVFINGIC-ITLSYHRNLSHRSFDLPKWLEYLFAYGGVLAFQGDPIEWVSNHRYHHKHCETQRDPHSPTQGFWFSHMAWIFDTSSILENCGGEENVDDLVRQPFYRFLQRTVLLHMMAYSFLFYFCGGMPLLVWGIG 262 HSP 2 Score: 33.113 bits (74), Expect = 4.150e-62 Identity = 19/56 (33.93%), Postives = 25/56 (44.64%), Query Frame = 3 Query: 897 TWLVNSAWHVGGKQAWNTGRFAPEQMGGWHYLHFRKKVGTTTNQAFPKIPRKHGLE 1064 T+LVNS H+ G +AWNT F+ W G N + +HGLE Sbjct: 272 TFLVNSVCHIWGTRAWNTSDFS---KNNWWVAILTLGEGWHNNHHAFEFSARHGLE 324
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADSL1_ARATH (Delta-9 desaturase-like 1 protein OS=Arabidopsis thaliana GN=At1g06090 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 5.845e-58 Identity = 100/185 (54.05%), Postives = 127/185 (68.65%), Query Frame = 1 Query: 262 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 V+ + F R W +DI+ A V A+HLL L APF + W +LR L +VT L IT S+HRNL+H+SFKLPKWLEY FAY + +LQG+PIDWVSTHR+HHQF DS+RDPHSPIEGFWFSH+ W+FD + E+CGG +NV DL++Q FYRFLR+T LH + P++ G G Sbjct: 16 VRGEKRAFFFRKWTRIDIARASAVGAVHLLCLLAPFNYKWEALRFGVILAIVTSL-SITFSYHRNLTHKSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRDNVMDLKQQWFYRFLRNTIGLHILTFWTLVYLWGGLPYLTCGVG 199 HSP 2 Score: 35.4242 bits (80), Expect = 5.845e-58 Identity = 20/46 (43.48%), Postives = 23/46 (50.00%), Query Frame = 3 Query: 882 GYITSTWLVNSAWHVGGKQAWNTGR-------FAPEQMG-GWHYLH 995 GY TWL+NSA H+ G +AWNT P MG WH H Sbjct: 205 GY-NGTWLINSACHIWGSRAWNTKDTSRNIWWLGPFTMGESWHNNH 249
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADSL3_ARATH (Delta-9 desaturase-like 3 protein OS=Arabidopsis thaliana GN=At1g06120 PE=2 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 9.936e-58 Identity = 97/185 (52.43%), Postives = 126/185 (68.11%), Query Frame = 1 Query: 262 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 V++ + F R W +D+ V A+HLL L APF +TW + R A + + T L IT S+HRNL+HRSFKLPKWLEY FAY + +LQG+PIDWVSTHR+HHQF DS+RDPHSPIEGFWFSH+ W+FD + E+CGG +NV DL++Q FYRFL++T LH + P++ W G Sbjct: 16 VRKEKRAFLFRKWTRVDVMRVSAVGAVHLLCLLAPFNYTWEAFRFAAMVGISTNL-SITFSYHRNLTHRSFKLPKWLEYPFAYSALFALQGHPIDWVSTHRFHHQFTDSDRDPHSPIEGFWFSHVFWIFDTSYIREKCGGRDNVMDLKQQWFYRFLQNTIGLHILTFWILVYLWGGLPYLTWSVG 199 HSP 2 Score: 35.4242 bits (80), Expect = 9.936e-58 Identity = 18/42 (42.86%), Postives = 22/42 (52.38%), Query Frame = 3 Query: 894 STWLVNSAWHVGGKQAWNTGR-------FAPEQMG-GWHYLH 995 +TWL+NSA H+ G +AWNT P MG WH H Sbjct: 208 ATWLINSACHIWGSRAWNTKDTSRNIWWLGPFTMGESWHNNH 249
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADS1_ARATH (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana GN=ADS1 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 4.878e-57 Identity = 101/184 (54.89%), Postives = 131/184 (71.20%), Query Frame = 1 Query: 265 KRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 +++R+++ R W LDI A L +H L L APF FTW +LRVA +Y V GL GIT+S+HRNL+HRSFK+PKWLEY FAYCG+ ++QG+PIDWVSTHRYHHQF DS+RDPHSP EGFWFSH+ WLFD ++E+CG NV DL++Q +Y+FL+ T + H + F+ WG G Sbjct: 24 RKKRAMWE-RKWKRLDIVKAFASLFVHFLCLLAPFNFTWPALRVALIVYTVGGL-GITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSPNEGFWFSHLLWLFDTGYLVEKCGRRTNVEDLKRQWYYKFLQRTVLYHILTFGFLLYYFGGLSFLTWGMG 205 HSP 2 Score: 23.8682 bits (50), Expect = 4.878e-57 Identity = 9/18 (50.00%), Postives = 11/18 (61.11%), Query Frame = 3 Query: 897 TWLVNSAWHVGGKQAWNT 950 T L+NS HV G + W T Sbjct: 215 TCLINSLCHVWGSRTWKT 232
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADSL2_ARATH (Delta-9 desaturase-like 2 protein OS=Arabidopsis thaliana GN=At1g06100 PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.410e-56 Identity = 94/185 (50.81%), Postives = 123/185 (66.49%), Query Frame = 1 Query: 262 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 V++ + + R W D+ A V +HLL L APF + W + R L ++T L IT S+HRNL+HRSFKLPKWLEY FAY + +LQG+P+DWVS HR+HHQF DS+RDPHSPIEGFWFSH+ W+FD D + E+CG NNV DL++Q FYRFL+ T +LH + P++ W G Sbjct: 16 VRKEKRAYVLRKWTQFDVGRASTVGTVHLLCLLAPFNYKWEAFRFGIILAILTNLC-ITFSYHRNLTHRSFKLPKWLEYPFAYSALLALQGDPLDWVSIHRFHHQFTDSDRDPHSPIEGFWFSHVLWIFDTDYIREKCGRRNNVMDLKQQWFYRFLKKTLVLHILAFWTLIYLWGGLPYLTWTVG 199 HSP 2 Score: 33.4982 bits (75), Expect = 1.410e-56 Identity = 13/18 (72.22%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 897 TWLVNSAWHVGGKQAWNT 950 TWLVNSA H+ G QAW T Sbjct: 209 TWLVNSACHICGSQAWQT 226
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADS2_ARATH (Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana GN=ADS2 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.395e-56 Identity = 100/184 (54.35%), Postives = 125/184 (67.93%), Query Frame = 1 Query: 265 KRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 K+RR +F R W LD +H LAL APF FTWS+L V F Y + GL GIT+S+HRNL+HRSFK+PKWLEYL AYC + ++QG+PIDWVSTHRYHHQF DSERDPHSP EGFWFSH+ W++D ++ +CG NV DL++Q FYRFL+ T + H + F+ WG G Sbjct: 25 KKRRWVFWDRRWRRLDYVKFSASFTVHSLALLAPFYFTWSALWVTFLFYTIGGL-GITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFTDSERDPHSPKEGFWFSHLLWIYDSAYLVSKCGRRANVEDLKRQWFYRFLQKTVLFHILGLGFFLFYLGGMSFVTWGMG 207 HSP 2 Score: 23.0978 bits (48), Expect = 2.395e-56 Identity = 8/18 (44.44%), Postives = 11/18 (61.11%), Query Frame = 3 Query: 897 TWLVNSAWHVGGKQAWNT 950 T L+NS H+ G + W T Sbjct: 217 TCLINSLCHIWGTRTWKT 234
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADSL4_ARATH (Delta-9 desaturase-like 4 protein OS=Arabidopsis thaliana GN=At1g06350 PE=2 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 1.971e-52 Identity = 94/187 (50.27%), Postives = 122/187 (65.24%), Query Frame = 1 Query: 256 VLVKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 V ++R+ F R W +D+ A VV+ +H L L APF F W +LR L+ +T L IT SFHRNLSHRSFK+PKWLEY +AY V +LQG+P+DWVS HR+HHQF DS+RDPHSP EG FSH+ W+FD + +CGG +NV DL+KQ FY+FLR T +H + P++ G G Sbjct: 16 VSTMQKRAYFQ-RQWPLVDVVRASVVVIVHFLCLLAPFNFKWEALRFGLVLFALT-TLSITFSFHRNLSHRSFKIPKWLEYPWAYSAVFALQGDPMDWVSIHRFHHQFTDSDRDPHSPKEGLLFSHILWIFDTQYIKYKCGGRDNVLDLKKQWFYKFLRRTIAVHILMFWTILYLYGGLPYLTCGGG 200 HSP 2 Score: 33.4982 bits (75), Expect = 1.971e-52 Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 3 Query: 897 TWLVNSAWHVGGKQAWNT 950 TWLVNSA H+ G ++WNT Sbjct: 210 TWLVNSACHIWGSRSWNT 227
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ADSL5_ARATH (Delta-9 desaturase-like 5 protein OS=Arabidopsis thaliana GN=At1g06360 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 2.570e-52 Identity = 94/185 (50.81%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 262 VKRRRSLFSGRNWNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGLYVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNG 816 V + + + R W+ DI A V+ +H L L APF + W +LR F LY +T L IT S+HRNL+HRSFKLPKWLEY AY V +LQG+P+DWVS HR+HHQF DS+RDPHSPIEGFWFSH+ W+ D + +CGG NNV DL++Q FY FLR T H + P++ G G Sbjct: 16 VSKEKRPYIHREWSWADIIRALTVINVHFLCLLAPFNYKWEALRFGFVLYALTSL-SITFSYHRNLAHRSFKLPKWLEYPLAYFAVFALQGDPLDWVSIHRFHHQFTDSDRDPHSPIEGFWFSHVWWICDTRYIKYKCGGRNNVMDLKQQWFYWFLRMTIGFHVLMFWTVLYLYGGLPYLTCGGG 199 HSP 2 Score: 31.187 bits (69), Expect = 2.570e-52 Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 3 Query: 897 TWLVNSAWHVGGKQAWNT 950 TWLVNSA H+ G ++W T Sbjct: 209 TWLVNSACHIWGSRSWKT 226
BLAST of DY304940 vs. ExPASy Swiss-Prot
Match: ACO1_SCHPO (Probable acyl-CoA desaturase OS=Schizosaccharomyces pombe GN=SPCC1281.06c PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.062e-17 Identity = 52/185 (28.11%), Postives = 91/185 (49.19%), Query Frame = 1 Query: 298 WNSLDISTAGVVLAMHLLALFAPFCFTWSSLRVAFGL--YVVTGLLGITLSFHRNLSHRSFKLPKWLEYLFAYCGVQSLQGNPIDWVSTHRYHHQFCDSERDPHSPIEGFWFSHMSWLFDKDSVLERCGGPNNVGDLEKQPFYRFLRSTYILHPIXXXXXXXXXXXFPFIVWGNGKEALSXXAVC 846 W L+ ++ + ++A++ F + + F + Y +GL GIT +HR SHR++K K LEY A G + +G+ W HR HH++ D+++DP++ +GFW++H+ W+ + R G ++V DL PF F ++ PI F ++WG+ + VC Sbjct: 59 WRHLNWLHCMLIFGLPMIAIYGVFTTPLQTKTLIFAIIYYAYSGL-GITAGYHRLWSHRAYKAKKPLEYFLAAGGAAAFEGSIRWWSRDHRAHHRYTDTDKDPYNVKKGFWYAHVGWMIILQN--PRRIGRSDVSDLNSDPFVMFNHRHFL--PIASFMAFIFPSLFCGLLWGDYRGGYFYAGVC 238 The following BLAST results are available for this feature:
BLAST of DY304940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY304940 ID=DY304940; Name=DY304940; organism=Citrus clementina; type=EST; length=1302bpback to top |