DY305047

Overview
NameDY305047
Unique NameDY305047
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length794
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig8818 contig Ccv1_Contig8818:489..1280. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 346.665 bits (888), Expect = 8.881e-95
Identity = 162/188 (86.17%), Postives = 177/188 (94.15%), Query Frame = 1
Query:    7 IRHEAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 570
            +  +AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDT+GAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LVDFFEKCK DP++WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLA E
Sbjct:  618 LEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.160e-94
Identity = 165/189 (87.30%), Postives = 179/189 (94.71%), Query Frame = 1
Query:    7 IRHEAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 573
            +  +AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDTKGAFVQPA+YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKISLGGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE
Sbjct:  618 LEEKAEMKKMYELIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 806          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 346.28 bits (887), Expect = 1.160e-94
Identity = 161/186 (86.56%), Postives = 178/186 (95.70%), Query Frame = 1
Query:   16 EAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 573
            +AEMKKMY LI++YKLNGQFRWISSQM+RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHG+QAA+ L DFF KCK DPS+WD+IS GGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLE+RRYLEMFYALKYR LA++VPLA ++
Sbjct:  623 KAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQDD 808          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 7.518e-94
Identity = 163/188 (86.70%), Postives = 177/188 (94.15%), Query Frame = 1
Query:    7 IRHEAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 570
            +  +AEMKKMYSLI+ YKLNGQFRWISSQMNRVRNGELYR I DTKGAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK K DPS+WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  618 LEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVIADTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 8.313e-93
Identity = 163/184 (88.59%), Postives = 174/184 (94.57%), Query Frame = 1
Query:   19 AEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 570
            AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDTKGAFVQPA+YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKIS GGL+RIEEKYTW IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  622 AEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 1.086e-92
Identity = 161/189 (85.19%), Postives = 172/189 (91.01%), Query Frame = 1
Query:    7 IRHEAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 573
            +  +A+MKKMY LID YKLNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQ AE+LV+FFEKCK DPS WD IS GGLKRI+EKYTW+IYS+RLLTL GVYGFWKHVS LDRLE RRYLEMFYALKYRKLAESVPLA +E
Sbjct:  620 LEEQAQMKKMYELIDTYKLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLAKDE 808          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 6.586e-90
Identity = 155/188 (82.45%), Postives = 170/188 (90.43%), Query Frame = 1
Query:    7 IRHEAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 570
            +  +AEMKKMY LI+ + LNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK DPS+W+ IS+GGLKRIEEKYTW+IYS+ LLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  618 LEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWETISMGGLKRIEEKYTWQIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 8.602e-90
Identity = 159/186 (85.48%), Postives = 172/186 (92.47%), Query Frame = 1
Query:   16 EAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ-PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 570
            +AEM KM+ LI+ YKLNGQFRWISSQMNRVRNGELYRYI DTKG     PA+YEAFGLTVVE+MTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHGEQAA++LVDFFEK KADPS+W KISLGGL+RI EKYTWKIYS+RLLTLTGV  FWKHVSNLDRLESRRY+EMFYALKYRKLAESVPLAVE
Sbjct:  618 KAEMTKMHGLIETYKLNGQFRWISSQMNRVRNGELYRYIADTKGGLCAGPAIYEAFGLTVVESMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGEQAAQLLVDFFEKTKADPSHWAKISLGGLQRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.916e-89
Identity = 154/188 (81.91%), Postives = 170/188 (90.43%), Query Frame = 1
Query:    7 IRHEAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 570
            +  +AEMKKMY LI+ + LNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK +PS+W+ IS GGLKRI+EKYTW+IYS+RLLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  618 LEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKEPSHWETISTGGLKRIQEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of DY305047 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.060e-87
Identity = 152/188 (80.85%), Postives = 168/188 (89.36%), Query Frame = 1
Query:    7 IRHEAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 570
            +  +AEMKKMY LI  + LNGQFRWISSQMNRVRNGELYRYI DT+GAFVQPA YEAFGLTVVEAM+CGLPTFAT +GGPAEIIV+GKSG+ IDPYHGEQAA++L DFFEKCK DPS+W+ IS GGLKRI+EKYTW+IYS RLLTL  VYGFWKHVS LDRLE RRYLEMFYALK+RKLA+ VPLAVE
Sbjct:  618 LEEQAEMKKMYELIKTHNLNGQFRWISSQMNRVRNGELYRYIADTRGAFVQPAFYEAFGLTVVEAMSCGLPTFATNQGGPAEIIVHGKSGFQIDPYHGEQAADLLADFFEKCKVDPSHWEAISEGGLKRIQEKYTWQIYSDRLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805          
The following BLAST results are available for this feature:
BLAST of DY305047 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUSY_SOYBN8.881e-9586.17Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_VICFA1.160e-9487.30Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUS1_ARATH1.160e-9486.56Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_PHAAU7.518e-9486.70Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_MEDSA8.313e-9388.59Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS1_DAUCA1.086e-9285.19Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUS1_SOLTU6.586e-9082.45Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUSY_ALNGL8.602e-9085.48Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_SOLLC1.916e-8981.91Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS2_SOLTU3.060e-8780.85Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAH2AD03RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305047 ID=DY305047; Name=DY305047; organism=Citrus clementina; type=EST; length=794bp
TGCCGAATTCGGCACGAGGCTGAAATGAAGAAGATGTATTCCCTCATTGA
TCAATACAAATTGAATGGCCAGTTCCGATGGATCTCATCTCAGATGAATC
GGGTCAGGAACGGTGAATTGTACCGGTACATTTGTGATACAAAGGGAGCT
TTTGTGCAACCTGCACTGTATGAGGCCTTTGGCTTGACTGTTGTTGAGGC
CATGACCTGTGGATTGCCAACATTTGCAACTTGCAAGGGTGGCCCCGCTG
AGATTATCGTTAACGGGAAATCTGGCTACCACATTGATCCTTACCATGGT
GAGCAGGCTGCTGAGATCCTTGTTGACTTCTTTGAGAAGTGCAAGGCAGA
TCCCTCATACTGGGACAAGATATCACTGGGTGGCCTGAAGCGTATTGAAG
AGAAGTATACATGGAAAATTTACTCTCAGAGGCTTCTGACCCTGACTGGA
GTCTATGGGTTCTGGAAACATGTATCTAACCTTGATCGTCTTGAGAGCCG
TCGATACCTTGAAATGTTTTATGCTCTCAAGTACCGTAAGCTGGCTGAAT
CTGTTCCTCTGGCTGTGGAGGAGTAAATGGACATTGAGGGAAGCTCTCAG
GGTGGTTGGTCCGAGTGGAGGTTTCTTGAGTTGTGGAGAATAATGTCGCT
TCCGGGATTGCGATTGGACAAAGACTTTTTTCCCCCCGTTAAATTTTCTT
TTTTCCAATTTTTTTTTTGCCTTTTTGCATTTCTCAGCATTGTTTGTACT
TTTGGGTGTTCCACCCTCATCAATTCCATTATAGTTTGCGACTA
back to top