DY305084

Overview
NameDY305084
Unique NameDY305084
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1240
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305084 vs. ExPASy Swiss-Prot
Match: RBOHC_ARATH (Respiratory burst oxidase homolog protein C OS=Arabidopsis thaliana GN=RBOHC PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.290e-17
Identity = 38/48 (79.17%), Postives = 47/48 (97.92%), Query Frame = 3
Query:    3 KRVSLNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 146
            KR++++HP+++VGVFYCGAPALTKELRHLALDF+HKTST+F FHKENF
Sbjct:  858 KRIAMDHPNTKVGVFYCGAPALTKELRHLALDFTHKTSTRFSFHKENF 905          
BLAST of DY305084 vs. ExPASy Swiss-Prot
Match: RBOHD_SOLTU (Respiratory burst oxidase homolog protein D OS=Solanum tuberosum GN=RBOHD PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.874e-17
Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 3
Query:    3 KRVSLNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 146
            KR++LNH D+RVGVFYCGAPALTK L  LALDFSHKTSTKFDFHKENF
Sbjct:  811 KRIALNHTDARVGVFYCGAPALTKVLGQLALDFSHKTSTKFDFHKENF 858          
BLAST of DY305084 vs. ExPASy Swiss-Prot
Match: RBOHC_SOLTU (Respiratory burst oxidase homolog protein C OS=Solanum tuberosum GN=RBOHC PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 2.874e-17
Identity = 39/48 (81.25%), Postives = 46/48 (95.83%), Query Frame = 3
Query:    3 KRVSLNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 146
            KR++LNHP+++VGVFYCGAPALTKEL+  AL+FSHKTSTKFDFHKENF
Sbjct:  891 KRIALNHPEAKVGVFYCGAPALTKELKQHALNFSHKTSTKFDFHKENF 938          
BLAST of DY305084 vs. ExPASy Swiss-Prot
Match: RBOHA_ARATH (Respiratory burst oxidase homolog protein A OS=Arabidopsis thaliana GN=RBOHA PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 3.178e-16
Identity = 38/48 (79.17%), Postives = 43/48 (89.58%), Query Frame = 3
Query:    3 KRVSLNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 146
            KR+++NHP +RVGVFYCGA  L KELRHL+LDFSHKTSTKF FHKENF
Sbjct:  855 KRIAVNHPKTRVGVFYCGAAGLVKELRHLSLDFSHKTSTKFIFHKENF 902          
BLAST of DY305084 vs. ExPASy Swiss-Prot
Match: RBOHB_SOLTU (Respiratory burst oxidase homolog protein B OS=Solanum tuberosum GN=RBOHB PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.589e-15
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 3
Query:    3 KRVSLNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 146
            KRV++NHPD R+GVFYCG   L  ELRHL+ DFSHKT TKF+FHKENF
Sbjct:  820 KRVTINHPDQRIGVFYCGPQGLVGELRHLSQDFSHKTGTKFEFHKENF 867          
BLAST of DY305084 vs. ExPASy Swiss-Prot
Match: RBOHG_ARATH (Putative respiratory burst oxidase homolog protein G OS=Arabidopsis thaliana GN=RBOHG PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.827e-15
Identity = 34/48 (70.83%), Postives = 43/48 (89.58%), Query Frame = 3
Query:    3 KRVSLNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 146
            K+++++HP + VGVFYCGAP LTKELR LAL+F+HKTST+F FHKENF
Sbjct:  816 KQIAMDHPGANVGVFYCGAPVLTKELRQLALEFTHKTSTRFSFHKENF 863          
BLAST of DY305084 vs. ExPASy Swiss-Prot
Match: RBOHD_ARATH (Respiratory burst oxidase homolog protein D OS=Arabidopsis thaliana GN=RBOHD PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.626e-14
Identity = 32/48 (66.67%), Postives = 41/48 (85.42%), Query Frame = 3
Query:    3 KRVSLNHPDSRVGVFYCGAPALTKELRHLALDFSHKTSTKFDFHKENF 146
            K++++ HP  R+GVFYCG P + KEL++LALDFS KT+TKFDFHKENF
Sbjct:  874 KKIAVQHPGKRIGVFYCGMPGMIKELKNLALDFSRKTTTKFDFHKENF 921          
The following BLAST results are available for this feature:
BLAST of DY305084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
RBOHC_ARATH1.290e-1779.17Respiratory burst oxidase homolog protein C OS=Ara... [more]
RBOHD_SOLTU2.874e-1785.42Respiratory burst oxidase homolog protein D OS=Sol... [more]
RBOHC_SOLTU2.874e-1781.25Respiratory burst oxidase homolog protein C OS=Sol... [more]
RBOHA_ARATH3.178e-1679.17Respiratory burst oxidase homolog protein A OS=Ara... [more]
RBOHB_SOLTU4.589e-1572.92Respiratory burst oxidase homolog protein B OS=Sol... [more]
RBOHG_ARATH7.827e-1570.83Putative respiratory burst oxidase homolog protein... [more]
RBOHD_ARATH6.626e-1466.67Respiratory burst oxidase homolog protein D OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH2BB11RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305084 ID=DY305084; Name=DY305084; organism=Citrus clementina; type=EST; length=1240bp
GCAAACGCGTTTCTCTCAATCACCCTGATTCTAGAGTTGGTGTTTTCTAT
TGCGGGGCACCGGCACTGACAAAAGAGCTACGACACCTAGCTTTGGATTT
CTCTCACAAGACAAGCACCAAGTTTGATTTCCATAAAGAAAACTTCTAGA
TCAAGTCCCTCCTGATTTCCACCATTATATATCATCTCTTCCACTCCGTT
TTCTCGTACAAAGCCTGTGGCATGGCCCACTGGCCCTTATGTTTATAGAA
AAATCATATCAATATTTGTTTGGTACCCAGTTGATTTTGCTGCAAAATCA
CTAATAGAGAGCATTAGAAATATCAAGCGGACAAAGGTTGGTGGGTAGTT
GATATCAAGGCCACACCACACTGGACACACAACACATGGCAAGGGAGATA
TAGGCCGAAAAAGGGGTTTAGCAAAAAAGTCATGCTCAGCCATTTCCTTT
TGTTAAAAGTTGTGGTCCAAGCCAATAATTTTGTGAGAAATAGTAATAAT
GGCAGCCTGGCAGCCACCACTAATAGTGGCGGCCTGGCAGCCACCACCAA
CTCAGTCCTGAGCAGGCGAAATGTGAAGGGGTTTTTGTTTTGTTTTGCTT
TTCTTTTTGGTTAGAGGAGTTTGTTGATTTATTTGATTAAGAAAAAGTGG
GATGTCATTTGATTCTTCCCAAAGACCCTTTAAACAAGCAGATCGTCCTC
ACCCACAATTAGGGACAAAAATAAAGCCAGTTCCGATTGTTAAGTATGAG
AGAGGTGAAGGGGGAGACAGATCCGCACCTTAGGGCCTTTTCGATGTTAG
GGTAAAGGGGGGGCGGGGGGGGAGGGAGGATAGAGTTGGGTGGGGGTTTA
GAGGGGGTTCAGATCTTAGAGGAGGGTTATTTTCTCGTCAAAATATTGTG
AAAGGGAAAGCCCCACCATGGGGGGTACCCGACGGATTTTTCCGAGAACG
CCGCTCTTCCACCGACACTGTGGTTCACAAGGGGAGCGCGCGAAATTAGT
AAATGGGGCATGGTGAAAGGTGAGAGGACAAGAAAACGGGTTGTAATGGG
GAAAAGAGGGTTGGCGGAGGGGGAAAGAGAGTTTAGGGGAGTTTGGGAGG
GGGAGAGGAGAAGAATAGCATTCGTTTATATGTTTGTTTAGAAAGTATGA
GCAGGAAAAACAGAGGAAGAAAGAAGTAGGGAAGGACGCTATGTGTAGGG
GGGGGGAGGGTGGGGGGAACGCAGGAGCGAGTAGGCATAG
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