DY305101

Overview
NameDY305101
Unique NameDY305101
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1225
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305101 vs. ExPASy Swiss-Prot
Match: P2R3C_RAT (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Rattus norvegicus GN=Ppp2r3c PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.278e-17
Identity = 81/262 (30.92%), Postives = 124/262 (47.33%), Query Frame = 3
Query:  267 MLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFPSPHEMEAYIPGLIPSLAQLRDMPTGLYSNVMSEKLPPKFFFFWGSPQT-KVK----GALSFLFTIKKLK 1004
            M W   LRR + S          E E K   +D+F +        ++  +    TIP FY + P E  +   +++  ++  FL+++S           +W  L ++  I    G E M NYE+F  +     E+ GPKC++FF+   F K    D  GR++I+ F+ YVMR V L Q RI +S  D    G+    ++E YI  LIP+L QL  +    YS  +   +  KFFFF    +T K+K     A SFL  + +L+
Sbjct:    1 MDWKDVLRRRLASPNSDPKRKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QIPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRVSIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAV-RKFFFFLDPLRTGKIKIQDILACSFLDDLLELR 256          
BLAST of DY305101 vs. ExPASy Swiss-Prot
Match: P2R3C_MOUSE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Mus musculus GN=Ppp2r3c PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 1.669e-17
Identity = 82/262 (31.30%), Postives = 124/262 (47.33%), Query Frame = 3
Query:  267 MLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFPSPHEMEAYIPGLIPSLAQLRDMPTGLYSNVMSEKLPPKFFFFWGSPQT-KVK----GALSFLFTIKKLK 1004
            M W   LRR + S          E E K   +D+F +        ++  +    TIP FY + P E  +   +++  ++  FL+++S           +W  L ++  I    G E M NYE+F  +     E+ GPKC++FF+   F K    D  GRI+I+ F+ YVMR V L Q RI +S  D    G+    ++E YI  LIP+L QL  +    YS  +   +  KFFFF    +T K+K     A SFL  + +L+
Sbjct:    1 MDWKDVLRRRLASPNTDPKRKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QIPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAV-RKFFFFLDPLRTGKIKIQDILACSFLDDLLELR 256          
BLAST of DY305101 vs. ExPASy Swiss-Prot
Match: P2R3C_BOVIN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Bos taurus GN=PPP2R3C PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 3.718e-17
Identity = 77/261 (29.50%), Postives = 123/261 (47.13%), Query Frame = 3
Query:  267 MLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFPSPHEMEAYIPGLIPSLAQLRDMPTGLYSNVMSEKLPPKFFFFWGSPQT-KVK----GALSFLFTIKKLK 1004
            M W   LRR + + +    +   E E K   +D+F +        ++  +    TIP FY + P E  +   +++  ++  FL+++S           +W  L ++           +NYE+F  +     E+ GPKC++FF+   F K    D  GRI+I+ F+ YVMR V L Q RI +S  D    G+    ++E YI  LIP+L QL  +    YS  +   +  KFFFF    +T K+K     A SFL  + +L+
Sbjct:    1 MDWKEILRRRLATPSTSPHKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVG----EKAGPKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAV-RKFFFFLDPLRTGKIKIQDILACSFLDDLLELR 256          
BLAST of DY305101 vs. ExPASy Swiss-Prot
Match: P2R3C_HUMAN (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Homo sapiens GN=PPP2R3C PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.845e-16
Identity = 76/261 (29.12%), Postives = 122/261 (46.74%), Query Frame = 3
Query:  267 MLWVRNLRRFIGSGTGLGSEALMELETKRILLDIFRE--------KQQKSAEAGTIPSFYKKKPEEGSIS-HRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFPSPHEMEAYIPGLIPSLAQLRDMPTGLYSNVMSEKLPPKFFFFWGSPQT-KVK----GALSFLFTIKKLK 1004
            M W   LRR + +     ++   E E K   +D+F +        ++  +    TIP FY + P E  +   +++  ++  FL+++S           +W  L ++           +NYE+F  +     E+ G KC++FF+   F K    D  GRI+I+ F+ YVMR V L Q RI +S  D    G+    ++E YI  LIP+L QL  +    YS  +   +  KFFFF    +T K+K     A SFL  + +L+
Sbjct:    1 MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVG----EKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAV-RKFFFFLDPLRTGKIKIQDILACSFLDDLLELR 256          
BLAST of DY305101 vs. ExPASy Swiss-Prot
Match: P2R3C_XENTR (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Xenopus tropicalis GN=ppp2r3c PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.936e-15
Identity = 79/257 (30.74%), Postives = 122/257 (47.47%), Query Frame = 3
Query:  267 MLWVRNLRRFIG-SGTGLGSEALMELETKRILLDIFREKQQ--KSAEAGTIPSFYKKKPEEGSI-SHRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFPSPHEMEAYIPGLIPSLAQLRDMPTGLYSNVMSEKLPPKFFFFWGSPQT-KVK----GALSFLFTIKKLK 1004
            M W R+L+  +   G    SE  M+ E   +  + + E +   K + A  IP FY + P E  +   +++  ++  FL+++S           +W  L ++       G E M NY +F  +     E+ G KC+ FF+   F K    D  GRI+I+ F+ YVMR V L Q RI +S  D    G+    ++E YI  LIP+L QL  +    YS  +   +  KFFFF    +T K+K     A SFL  + +L+
Sbjct:    1 MDWKRSLKEKLRRDGYVRKSEQEMKEEEMSLFTNYYTEWKGGGKVSSAQNIPRFYYRLPAEDEVLQQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKH-QSPPLIGEEAMINYTNFQTVG----EKAGEKCKTFFTSKVFSKLIPNDPYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAV-RKFFFFLDPLRTGKIKIQDILACSFLDDLLELR 251          
BLAST of DY305101 vs. ExPASy Swiss-Prot
Match: P2R3C_DANRE (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma OS=Danio rerio GN=ppp2r3c PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.323e-14
Identity = 60/180 (33.33%), Postives = 90/180 (50.00%), Query Frame = 3
Query:  408 IPSFYKKKPEEGSI-SHRVQRLAKYRFLKKQSXXXXXXXXXXXMWVCLRENCVIDDATGAEKM-NYEDFCHIASVCTEQIGPKCRRFFSPSNFMKF-EKDESGRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFPSPHEMEAYIPGLIPSLAQLRDMPTGLYSNVMSEKLPPKFFFF 938
            IP FY + P E  +   +++  ++  FL+++S           +W  L ++ V    TG E M +YE F  +     E+ G KC+ FF+   + K    D  GRI+I+ F+ YVMR V L Q RI +S  D    G+    ++E YI  LIP+L QL  +    YS  +   +  KFFFF
Sbjct:   59 IPRFYYRLPAEDEVLMQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQV-PPTTGDEAMISYESFLKVG----EKAGTKCKLFFTARVYAKLLHNDPYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAV-RKFFFF 232          
The following BLAST results are available for this feature:
BLAST of DY305101 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
P2R3C_RAT1.278e-1730.92Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_MOUSE1.669e-1731.30Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_BOVIN3.718e-1729.50Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_HUMAN1.845e-1629.12Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_XENTR5.936e-1530.74Serine/threonine-protein phosphatase 2A regulatory... [more]
P2R3C_DANRE1.323e-1433.33Serine/threonine-protein phosphatase 2A regulatory... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH2BF02RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305101 ID=DY305101; Name=DY305101; organism=Citrus clementina; type=EST; length=1225bp
GGGGGAAAATAAGACGTGATAGATTATGAGTTTCTAATTTCTTGAATTGG
TTTTTTCGCTAAGCCCGTCCTGAAATTCTAGGGTTTAATTCATTTCTACA
AATTCTGTAAATTTTATTTAACAAATTACAGGGTGAAAAAGTTGAACTTG
TTCGAGTTTACTGAAGAGTCGAATTAGTTACTTGGATTCGGCCGGCCATG
TACAGTGGGTCCAGTGATGGCGAGAGTCACGAGGCCGCGCAGCGAAAGAT
CCCGCCGGCTTCGTCAATGCTTTGGGTCCGAAACTTGCGTCGCTTCATTG
GATCCGGTACCGGCCTTGGATCCGAAGCCTTGATGGAGCTTGAGACAAAG
AGAATTTTGCTTGATATATTTAGAGAGAAGCAACAGAAAAGTGCTGAAGC
TGGCACAATTCCCAGCTTCTACAAGAAGAAACCTGAAGAAGGGTCCATTA
GTCACAGGGTCCAGAGACTTGCAAAATATCGGTTTTTAAAGAAGCAATCA
GATCTTTTACTAAATGCTGATGATCTGGATGCAATGTGGGTTTGCTTGAG
AGAAAACTGTGTTATTGATGATGCCACTGGTGCAGAAAAGATGAATTATG
AAGATTTTTGCCACATTGCATCAGTATGTACTGAGCAAATAGGCCCTAAG
TGTAGACGTTTCTTCAGCCCGTCAAATTTTATGAAGTTTGAGAAAGATGA
GTCGGGGAGAATCGCCATTTTGCCGTTCTATCTATATGTGATGCGTACGG
TTTCACTTACACAAGCCAGAATTGATATGAGTGAGCTTGATGAAGATTCT
GATGGTTTCCCTTCACCTCATGAAATGGAGGCTTATATACCTGGTCTGAT
TCCTAGTCTGGCACAACTACGTGATATGCCAACCGGGCTTTATTCAAATG
TAATGTCCGAAAAGCTGCCCCCAAAATTCTTCTTCTTTTGGGGATCCCCA
CAGACCAAAGTTAAGGGGGCCCTTAGTTTCCTGTTTACAATAAAAAAGTT
AAAAATTTGGACTTGGAATAATCCTAAAAAAAGCCGGAGGGTCAAGGGGG
AAAATTTTTCCCCTTTTGGGGAAAAGGTAATATTGGAATTTTTTTGGGGA
AAATTCCCCCTTTTTTTGGGGCTTTTTTTTAAAAGGGGGGCTTTGGGGTT
TGTCCCCCAAAAAAATTGGTTTTTAAAACGGGGTGTTTAATCCCCTTTTT
TCAATATTATACAAACAGGGAAAAA
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