DY305124
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305124 vs. ExPASy Swiss-Prot
Match: KCO1_ARATH (Calcium-activated outward-rectifying potassium channel 1 OS=Arabidopsis thaliana GN=KCO1 PE=1 SV=2) HSP 1 Score: 177.563 bits (449), Expect = 1.595e-55 Identity = 100/192 (52.08%), Postives = 130/192 (67.71%), Query Frame = 1 Query: 235 MASNGANQPLL-SGFVDSTSQTNNKDA----PKRRRLRRCRSAPQTDVAALD---INEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKEIEPTK 786 M+S+ A PLL + +D+ +Q N ++ ++RRLRR RSAP+ D D I+E +F PN +RV+++LA YL G+L FY V QI G KT+ ++D++YFCIVTMTTVGYGDLVPNS S+LL+CAFVF+GM LVG LS+AADYLV+KQE LLV+A H Q GPTDILKE+ K Sbjct: 1 MSSDAARTPLLPTEKIDTMAQDFNLNSRTSSSRKRRLRRSRSAPRGDCMYNDDVKIDEPPPHPSKIPMFSDLNPNLRRVIMFLALYLTIGTLCFYLVRDQISGHKTSGVVDALYFCIVTMTTVGYGDLVPNSSASRLLACAFVFSGMVLVGHLLSRAADYLVEKQEALLVRAFHLRQSFGPTDILKELHTNK 192 HSP 2 Score: 54.299 bits (129), Expect = 1.595e-55 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 2 Query: 866 KMSFVDAFYCVCSTITTLSYGDKTFSTTEGRGFGCKFGFQVITRNLYKVFFLNLWPNFKNEKKKKRGLLPIWV 1084 KM + AFYCVCST+TTL YGDK+F++ GR F F ++T ++ F L+ N + K+R L+ WV Sbjct: 220 KMPVISAFYCVCSTVTTLGYGDKSFNSEAGRLFAV---FWILTSSICLAQFF-LYVAELNTENKQRALVK-WV 287 HSP 3 Score: 28.1054 bits (61), Expect = 1.595e-55 Identity = 14/31 (45.16%), Postives = 16/31 (51.61%), Query Frame = 3 Query: 777 TNKVRYKCXXXXXXXXXXXXXGDIFLGVVEK 869 TNK+RYKC G IFL +VEK Sbjct: 190 TNKLRYKCYATCLVLVVLFIVGTIFLVMVEK 220
BLAST of DY305124 vs. ExPASy Swiss-Prot
Match: KCO4_ARATH (Putative outward-rectifying potassium channel 4 OS=Arabidopsis thaliana GN=KCO4 PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 2.542e-16 Identity = 32/108 (29.63%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 448 LVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQKVGPTDILKE 771 ++ L YL G ++ Q G +TN +D+ YF IVT +TVGYGD+VP++ +K+L+ V TG+ + L++ +++ QE ++ +++ + D + E Sbjct: 39 MILLLVYLTFGVCTYSFFRDQFSGTETNLFVDAFYFSIVTFSTVGYGDIVPSTSTTKILTIVLVSTGVVFLDYLLNRVVSHVLSLQENAILDRINKTRNRAIRDHIAE 146 HSP 2 Score: 41.5874 bits (96), Expect = 2.542e-16 Identity = 16/33 (48.48%), Postives = 24/33 (72.73%), Query Frame = 2 Query: 866 KMSFVDAFYCVCSTITTLSYGDKTFSTTEGRGF 964 ++ ++D+ Y ++TT+ YGDKTF T EGRGF Sbjct: 179 RLDWLDSVYLSVISVTTVGYGDKTFKTVEGRGF 211
BLAST of DY305124 vs. ExPASy Swiss-Prot
Match: KCO6_ARATH (Probable calcium-activated outward-rectifying potassium channel 6 OS=Arabidopsis thaliana GN=KCO6 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.167e-15 Identity = 49/139 (35.25%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 328 LRRCRSAPQTDVAA---LDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHR 735 L R ++AP V I +KD T S S+ ++ L YL G L ++ +T+ ++D +YFCIVTM T+GYGD+ PNSVV+KL S FV G G + + LS Y++D QE ++ + R Sbjct: 118 LHRSKTAPAMAVINDLHHPIRQKDPTETSRSVV-------RQAFALLVVYLSLGVLIYWLNRDHYVVNQTHPVVDGLYFCIVTMCTIGYGDITPNSVVTKLFSIMFVLVGFGFIDILLSGMVSYVLDLQESYMLDSAKR 249
BLAST of DY305124 vs. ExPASy Swiss-Prot
Match: KCO5_ARATH (Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic OS=Arabidopsis thaliana GN=KCO5 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.685e-14 Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = 1 Query: 280 DSTSQTNNKDAPKRRRLRRCRSAPQTDVAALDINEKDSTHLSESLFGKPRPNFKRVLVYLAAYLGGGSLSFYAVN-SQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQEILLVKALHRYQ 741 DS S N+ + R L R R+AP V D+ K S K ++ + L YL G +S Y+ N G++T+ ++D++YFCIVTM T+GYGD+ P + +K+ + FV G G + + LS +Y++D QE +++ + Q Sbjct: 68 DSDSDETNRFLSQTRPLHRSRTAPAM-VIIKDLRTKPPETKKPSPVSKSI--IRQAIFLLIVYLTLG-VSIYSFNRDHYSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPWTKIFAVVFVLFGFGFLDILLSGVVNYVLDLQESMILTGIQTRQ 218
BLAST of DY305124 vs. ExPASy Swiss-Prot
Match: KCO2_ARATH (Probable calcium-activated outward-rectifying potassium channel 2 OS=Arabidopsis thaliana GN=KCO2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.434e-13 Identity = 36/89 (40.45%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 442 RVLVYLAAYLGGGSLSFYAVNSQIEGLKTNEILDSIYFCIVTMTTVGYGDLVPNSVVSKLLSCAFVFTGMGLVGLFLSKAADYLVDKQE 708 + + L YL G L ++ +T+ ++D++YFCIVTM T+GYGD+ P+SVV+KL S FV G G + + LS Y++D QE Sbjct: 148 QAVALLVVYLSLGVLIYWLNRDSYNVKQTHPVVDALYFCIVTMCTIGYGDITPDSVVTKLFSIFFVLVGFGFMDILLSGMVTYVLDLQE 236 The following BLAST results are available for this feature:
BLAST of DY305124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305124 ID=DY305124; Name=DY305124; organism=Citrus clementina; type=EST; length=1200bpback to top |