DY305206

Overview
NameDY305206
Unique NameDY305206
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1215
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305206 vs. ExPASy Swiss-Prot
Match: ESCA_ARATH (Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.916e-14
Identity = 57/150 (38.00%), Postives = 78/150 (52.00%), Query Frame = 2 
Query:  476 RPKRSPASDSQAL-KRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPAT---------SVPTVTYEGRFEILCLSGSFLLAENGSPRDRTGGVSASLSSPDGHVFGG 895
            RP   P + S A  KR RGRPPG+  K +   +   +   +  A   HV+ +  G DIV  + +++++R R V +L G GTVS+VTLRQP T             VT  GRFEIL L+G+ +L     P    GG+S  L+   G V GG
Sbjct:   72 RPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPII---VTRDSPNALRSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGRFEILSLTGT-VLPPPAPP--GAGGLSIFLAGGQGQVVGG 215
The following BLAST results are available for this feature:
BLAST of DY305206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ESCA_ARATH2.916e-1438.00Putative DNA-binding protein ESCAROLA OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH2DF03RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305206 ID=DY305206; Name=DY305206; organism=Citrus clementina; type=EST; length=1215bp
TGCCTTTTTCGGCACGAGGGTGTTAGGGAGATCAGGATCTTGTGTGTATT
TAGTTTAAGATTTTAGCTTAAGTGGCTTAATAGACTCATTTTCTAGCTAC
CCAAAAAGAAAAAAAATTCATTTTCTACTTAGTAAATGCATGGACGGAAG
AGAAGCTATGGTTGCATCAGGGGGTGTCTCTGGTCCCTATTACATTCAAC
AACATAGAGGAGCATTCAGTGGTTCTCATTCAGCAACACAATCTGGTTTA
ATGCAAACCCCACCTGGGTTTAGATCCTCGTCAAATCTTAACATTCCAAC
TCAACCAAATGTGGGATCGACATTTGCAGTTGAGCCCAAACATGTCAATT
TTGGCCATAACATGAGTGTGCCATCCGGGGTGCCACTAAGTGATCCAGTG
AAGAAGAAGAGAGGTAGACCCCGCAAATATGCCCCTGATGGGCAGGTTTC
CTTGGGGCTTTCGCCATTGCCAGCCAGGCCAAAGCGTTCTCCGGCATCTG
ATTCGCAGGCCTTGAAACGGAGTAGAGGGCGGCCTCCTGGGACAGGCAGG
AAGCAGCAGTTGGCTACTCTTGGTGAATGGATGAATAGTTCAGCTGGAAT
TGCTTTTGCACCGCATGTGATCTCCATTGGAGTTGGAGAGGACATTGTGG
CTAAAATGTTGTCATTTTCACAACAGAGGCCAAGGGTTGTGTGCATCTTG
TCAGGCCGTGGTACAGTTTCTTCAGTAACACTCCGTCAGCCTGCAACTTC
AGTGCCCACCGTCACCTATGAGGGCCGTTTCGAGATATTATGCCTGTCTG
GTTCATTCTTACTTGCTGAAAATGGCAGTCCTCGTGATCGAACTGGTGGT
GTAAGTGCCTCCCTTTCAAGTCCTGATGGGCACGTATTCGGGGGGTGGAG
TTGGCTGGCTTAATCCCACCAGCCCCAGTTCAGGGGGTGGGGATGGAGTT
TTTGTTTTGGGGGGTTTCTAGAATTAAAAGCAAGCAATTTGCCGCCCCCT
GAAAAAGAACAAAAAATCTACCCCCCCCCCCCAATAAAAAAACCAAACCC
CCCCCAAATTTTTCCCCCCCGGCCCCCCCAAAAATTTTTCCCCCCCCTCC
CCCAAGGAAAATGGGCCGGGGGCCCGGGTTTTTTTGAAAAAACCCGTTAA
ATTTTTAAAAAAAACCCCCCCCCCCCCCCAAAAAATATTGTACCCCCGTA
AACCCCCCCGGGGGG
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