DY305239
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_BRAOL (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial OS=Brassica oleracea PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 9.521e-77 Identity = 147/222 (66.22%), Postives = 165/222 (74.32%), Query Frame = 3 Query: 120 MAVLTKNTATRLPLLL-SQRAAC---LHTTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGISKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 MA++T+NTATRLPL+L S RAA LHT++P G+SKTAEFVISK+DD++N+ RRGSIWPM+FGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSD M+VAGTLTNKMAPALRKVYDQMP+PRWVISMGSCAN CDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+N R+D +WW K Sbjct: 1 MAMITRNTATRLPLVLQSHRAAAVSHLHTSLPALSPATTPTSYTRPGPPSTSAPPP-------GLSKTAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWNK 215
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_ARATH (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial OS=Arabidopsis thaliana GN=At5g11770 PE=1 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 1.375e-75 Identity = 146/225 (64.89%), Postives = 163/225 (72.44%), Query Frame = 3 Query: 120 MAVLTKNTATRLPLLL-SQRAAC------LHTTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGISKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 MA++T+NTATRLPLLL SQRA LHT++P G+SK AEFVISK+DD++N+ R GSIWPM+FGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSD M+VAGTLTNKMAPALRKVYDQMP+PRWVISMGSCAN CDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+N R+D +WW K Sbjct: 1 MAMITRNTATRLPLLLQSQRAVAAASVSHLHTSLPALSPSTSPTSYTRPGPPSTSPPPP-------GLSKAAEFVISKVDDLMNWARTGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWNK 218
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_SOLTU (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 7.061e-72 Identity = 135/201 (67.16%), Postives = 148/201 (73.63%), Query Frame = 3 Query: 171 QRAACLHTTVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGISKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 QRAA +HTT+P GISK AE+VISK+DD++N+ RRGSIWPM+FGLACCAVEMMH GAARYD DRFGIIFRPSPRQSDVM+VAGTLTNKMAPALRKVYDQMP+PRWVISMGSCAN CDRIVPVDIYVPGCPPTAEALLYGILQLQKK+N R+DL WWT+ Sbjct: 19 QRAATIHTTLPSLSQQPASSPATSGGAQPPSMNTP------AGISKPAEYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHAGAARYDFDRFGIIFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDLLMWWTQ 213
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_RECAM (NADH-ubiquinone oxidoreductase 20 kDa subunit OS=Reclinomonas americana GN=NAD10 PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 2.059e-63 Identity = 112/153 (73.20%), Postives = 128/153 (83.66%), Query Frame = 3 Query: 315 EFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 EF++SK+D++VN+ R+GS+WPM+FGLACCAVEMMH+ A+RYDLDRFGIIFRPSPRQSDVM+VAGTLTNKMAPALRKVYDQM +PRWV+SMGSCAN CDRIVPVDIYVPGCPPTAEALLYG+LQLQKK+ R YW K Sbjct: 30 EFIVSKMDELVNWARKGSLWPMTFGLACCAVEMMHSAASRYDLDRFGIIFRPSPRQSDVMIVAGTLTNKMAPALRKVYDQMSEPRWVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKIKRSRKTLYWLQK 182
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_PONPY (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Pongo pygmaeus GN=NDUFS7 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 4.294e-61 Identity = 108/157 (68.79%), Postives = 127/157 (80.89%), Query Frame = 3 Query: 303 SKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 S E+V++KLDD+VN+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQSDVM+VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN CDRIVPVDIY+PGCPPTAEALLYGILQLQ+K+ R L W+ + Sbjct: 57 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYRR 213
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_PANTR (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Pan troglodytes GN=NDUFS7 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 4.294e-61 Identity = 108/157 (68.79%), Postives = 127/157 (80.89%), Query Frame = 3 Query: 303 SKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 S E+V++KLDD+VN+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQSDVM+VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN CDRIVPVDIY+PGCPPTAEALLYGILQLQ+K+ R L W+ + Sbjct: 57 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYRR 213
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_HUMAN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Homo sapiens GN=NDUFS7 PE=1 SV=3) HSP 1 Score: 235.728 bits (600), Expect = 4.294e-61 Identity = 108/157 (68.79%), Postives = 127/157 (80.89%), Query Frame = 3 Query: 303 SKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 S E+V++KLDD+VN+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQSDVM+VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN CDRIVPVDIY+PGCPPTAEALLYGILQLQ+K+ R L W+ + Sbjct: 57 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYRR 213
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_GORGO (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFS7 PE=2 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 4.294e-61 Identity = 108/157 (68.79%), Postives = 127/157 (80.89%), Query Frame = 3 Query: 303 SKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 S E+V++KLDD+VN+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQSDVM+VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN CDRIVPVDIY+PGCPPTAEALLYGILQLQ+K+ R L W+ + Sbjct: 57 SSRGEYVVAKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYRR 213
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_PONAB (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Pongo abelii GN=NDUFS7 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 5.608e-61 Identity = 107/157 (68.15%), Postives = 127/157 (80.89%), Query Frame = 3 Query: 303 SKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 S E+V++KLDD++N+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQSDVM+VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN CDRIVPVDIY+PGCPPTAEALLYGILQLQ+K+ R L W+ + Sbjct: 57 SSRGEYVVAKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYIPGCPPTAEALLYGILQLQRKIKRERRLQIWYRR 213
BLAST of DY305239 vs. ExPASy Swiss-Prot
Match: NDUS7_BOVIN (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Bos taurus GN=NDUFS7 PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 5.608e-61 Identity = 108/157 (68.79%), Postives = 127/157 (80.89%), Query Frame = 3 Query: 303 SKTAEFVISKLDDVVNYIRRGSIWPMSFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDVMVVAGTLTNKMAPALRKVYDQMPDPRWVISMGSCANXXXXXXXXXXXXXXCDRIVPVDIYVPGCPPTAEALLYGILQLQKKMNGRRDLYYWWTK 773 S E+V++KLDD++N+ RR S+WPM+FGLACCAVEMMH A RYD+DRFG++FR SPRQSDVM+VAGTLTNKMAPALRKVYDQMP+PR+V+SMGSCAN CDRIVPVDIYVPGCPPTAEALLYGILQLQKK+ + L W+ + Sbjct: 60 SSRGEYVVAKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKIKREKRLRIWYRR 216 The following BLAST results are available for this feature:
BLAST of DY305239 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305239 ID=DY305239; Name=DY305239; organism=Citrus clementina; type=EST; length=1251bpback to top |