DY305241

Overview
NameDY305241
Unique NameDY305241
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1206
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 4.113e-69
Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 1
Query:   58 LPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAK--ALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTAINEWVICRVLQ 507
            LPPGFRFHPTDEELITHYL  KV DGCFS+RAI EVDLNKCEPW LP RAKMGEKEWYFF +RDRKYPTGLRTNRATEAGYWKATGKD+EI+ +K  ALVGMKKTLVFY+GRAPKG+K+NWVMHEYRLEGK+S +   R++ +EWVI RV Q
Sbjct:   17 LPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQ 168          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 5.753e-63
Identity = 113/167 (67.66%), Postives = 137/167 (82.04%), Query Frame = 1
Query:   22 GMEKYDDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEI--YKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTAINEWVICRVLQTSG 516
            G  +++D+    +PPGFRFHPTDEELIT+YL  KV D  FS  AI +VDLNK EPW+LP +AKMGEKEWYFF +RDRKYPTGLRTNRATEAGYWKATGKD+EI   K K+L+GMKKTLVFY+GRAPKG+K+ WVMHEYRL+GK+S ++   +A +EWV+C+V   SG
Sbjct:   10 GRPRFEDESL--MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG 174          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=2 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 2.262e-59
Identity = 108/162 (66.67%), Postives = 124/162 (76.54%), Query Frame = 1
Query:   37 DDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKA--LVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTAINEWVICRVLQTSG 516
            +++ +  LPPGFRFHPTDEELIT YL  K+F G  S   I EVDLN+CEPW+LP  AKMGE+EWYF+ +RDRKYPTGLRTNRAT AGYWKATGKDKE++      LVGMKKTLVFY+GRAP+G KT WVMHEYRLE  +S   H  T   EWVICRV   +G
Sbjct:   15 EERNERGLPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNRCEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLVGMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHS---HRHTCKEEWVICRVFNKTG 173          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.982e-55
Identity = 106/184 (57.61%), Postives = 124/184 (67.39%), Query Frame = 1
Query:   31 KYDDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIY----------------KAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTAIN---EWVICRVLQTSGGGQ 525
            K +    + LPPGFRFHPTD E+I  YL  K+ +  F++  IGEVDLNKCEPWDLP +AKMGEKEWYFF  +D KYPTG+RTNRAT+ GYWKATGKD+EI+                K K LVGMKKTLVFY GRAPKG KTNWVMHE+RL       HHP   +N   EWV+C+V     G +
Sbjct:   10 KLEQDGGLFLPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLH-NHHPNLRLNPKDEWVVCKVFHKKQGDE 192          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.346e-48
Identity = 91/168 (54.17%), Postives = 114/168 (67.86%), Query Frame = 1
Query:   22 GMEKYDDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTAINEWVICRVLQTSGGGQ 525
            G+ + D   Q+ LPPGFRF+PTDEEL+  YL  KV    FS + IG++DL K +PWDLP +A  GEKEWYFF  RDRKYP G R NR   +GYWKATG DK I      VG+KK LVFY G+APKG KTNW+MHEYRL     +  H  + +++WV+CR+ + + G Q
Sbjct:    2 GVREKDPLAQLSLPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRL--IEHSRSHGSSKLDDWVLCRIYKKTSGSQ 167          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 1.986e-47
Identity = 88/160 (55.00%), Postives = 117/160 (73.12%), Query Frame = 1
Query:   49 QIELPPGFRFHPTDEELITHYLTPK-VFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTAINE-WVICRVLQTSGGG 522
            + +LPPGFRFHP D+EL+  YL  + + +       + +VDLNKCEPWD+P+ A +G K+WYF+  RDRKY TGLRTNRAT  GYWKATGKD+ I +   LVGM+KTLVFY+GRAP+G+KT+WVMHE+RL+G +   +H  ++  E WV+CRV   +  G
Sbjct:   16 EAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKDWYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRKGKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPKEDWVLCRVFHKNTEG 175          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.893e-46
Identity = 88/172 (51.16%), Postives = 113/172 (65.70%), Query Frame = 1
Query:   22 GMEKYDDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTAINEWVICRVLQTSGGGQESLF 537
            G+++ D   Q+ LPPGFRF+PTDEEL+  YL  K     FS + I E+DL K +PW LP +A  GEKEWYFF  RDRKYP G R NR   +GYWKATG DK I      VG+KK LVFY G+APKG KTNW+MHEYRL     +  +  T +++WV+CR+ +     Q+ ++
Sbjct:    2 GIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRL--IEPSRRNGSTKLDDWVLCRIYKKQSSAQKQVY 171          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 6.390e-46
Identity = 88/172 (51.16%), Postives = 112/172 (65.12%), Query Frame = 1
Query:   22 GMEKYDDQEQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTAINEWVICRVLQTSGGGQESLF 537
            G+++ D   Q+ LPPGFRF+PTDEEL+  YL  K     FS + I E+DL K +PW LP +A  GEKEWYFF  RDRKYP G R NR   +GYWKATG DK I      VG+KK LVFY G+APKG KTNW+MHEYRL     +  +  T +++WV+CR+ +     Q+  +
Sbjct:    2 GLQELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRL--IEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAY 171          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.859e-45
Identity = 87/159 (54.72%), Postives = 107/159 (67.30%), Query Frame = 1
Query:   46 EQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRL-EGKYSAYHHPRTAINEWVICRVLQTSGG 519
            + ++LPPGFRFHPTDEEL+ HYL  +      +   I E+DL K +PW LPR A  GEKEWYFF  RDRKYP G R NRA  +GYWKATG DK +   K  V +KK LVFY G+APKG+KTNW+MHEYRL +   SA       +++WV+CR+    GG
Sbjct:    5 QDLQLPPGFRFHPTDEELVMHYLCRRCAGLPIAVPIIAEIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKP-VAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGG 162          
BLAST of DY305241 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 5.409e-45
Identity = 86/159 (54.09%), Postives = 107/159 (67.30%), Query Frame = 1
Query:   46 EQIELPPGFRFHPTDEELITHYLTPKVFDGCFSARAIGEVDLNKCEPWDLPRRAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYKAKALVGMKKTLVFYRGRAPKGQKTNWVMHEYRLEGKYSAYHHPRTA--INEWVICRVLQTSG 516
            E ++LPPGFRFHPTDEEL+ HYL  K      +   I E+DL K +PW+LP  A  GEKEWYFF  RDRKYP G R NR+  +GYWKATG DK I   K  VG+KK LVFY G+APKG+KTNW+MHEYRL     +    + +  +++WV+CR+    G
Sbjct:    3 ELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKP-VGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKG 160          
The following BLAST results are available for this feature:
BLAST of DY305241 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC98_ARATH4.113e-6980.26Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thal... [more]
NAC54_ARATH5.753e-6367.66Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC31_ARATH2.262e-5966.67Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thal... [more]
NAC77_ORYSJ1.982e-5557.61NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC72_ARATH2.346e-4854.17NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC22_ARATH1.986e-4755.00NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC19_ARATH4.893e-4651.16NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC55_ARATH6.390e-4651.16NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC48_ORYSJ1.859e-4554.72NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC2_ARATH5.409e-4554.09NAC domain-containing protein 2 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3AC06RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305241 ID=DY305241; Name=DY305241; organism=Citrus clementina; type=EST; length=1206bp
GGTCATTCTTAGCTTCTTGCAGGAATGGAGAAATATGACGATCAAGAACA
GATTGAATTGCCTCCAGGATTTCGGTTCCATCCCACGGATGAAGAGCTTA
TAACTCATTACTTAACACCAAAGGTTTTTGATGGTTGTTTTTCAGCTAGA
GCTATCGGTGAAGTTGATTTGAACAAGTGTGAGCCCTGGGATTTGCCTCG
GAGAGCTAAAATGGGTGAAAAGGAATGGTATTTTTTTTGTGTTAGGGACA
GAAAGTACCCAACTGGATTGAGAACAAATAGAGCTACTGAAGCAGGTTAC
TGGAAAGCCACAGGCAAAGATAAGGAGATTTACAAAGCAAAAGCACTTGT
GGGGATGAAGAAAACTTTGGTTTTTTACAGAGGAAGAGCCCCGAAAGGTC
AAAAAACCAACTGGGTCATGCATGAATATCGTTTAGAAGGCAAATATTCT
GCCTACCACCACCCCAGAACAGCCATAAATGAGTGGGTGATTTGTAGGGT
GCTTCAAACTAGTGGTGGAGGACAAGAATCCCTATTCAAGGGATGGTGAA
ATTTACTTCTTCTCAAACGGCAGCGCCCCTACGGGGTGGCTCAGTTGATG
GATTCTCTTCCGTCTCCCTTAGAATTGTGAAACCCGCTTGATGAAACCCC
TCCTCTCAGCCTCGCTCATCAGGCCCGCGGGAACCAGTCAGAACCCGCAC
AGAAGNTGGAATACCTAACGGAAGAATGGAATGAACGTGCGGGGAACAGA
AAAAACGAAGGATATTACGGATGCAGTACTANAAAGNNAAAGAAAAAGAT
NATGACGAAGGACAGGAAAAGGATGTAACTAAGATTGGCACATGTGCGAA
CATAACTTTTGTATGTAGCACATAGGACCATAAGGGTGGCGGGGGGGGTA
AACACTGAGGAGTCCGTCCGATCCTTCTGAATTNCAGTTTCACTCAATAA
CCTTTAAGTATTGCGAAAGCGATTCTAAATAAAAAAATTCTTNCCTCTCA
GCCGATAGTCTCGCGCACCTGTAACCACCANACTTATACGTAAAANAATC
ATAAGCCTGAATTTATATAAATGGGACGAACAAAAAAGTTTTAGCTTCCA
AAAATATCTATTTGTGTGANTAAAAATTTAAAAACAATATGAAAAATATA
TTAAAATAAAATAATGGACTGAAAAATAAAGGGAAGATGGAAACAAGAAA
TCAATA
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