DY305306

Overview
NameDY305306
Unique NameDY305306
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length772
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY305306_ssr755 microsatellite DY305306_ssr755:755..766. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL4_ARATH (IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 7.977e-69
Identity = 140/210 (66.67%), Postives = 162/210 (77.14%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIEGGFHLASPP*KKAVQLVDFLVKKKTLFSSPPKKKNKFAQNIFQTV 633
            TMLLGAAK+L+EH EEL+GTVVLVFQPAEEGGGGA K++EAGVLE V+AIFGLHV   L +G+V+SR GP+LAGSGFF+A I GKGGHAA+PQH+IDPILAASNVIVSLQHLVSREADPLDSQVVTVAK +GGGAFN IP SV IGGTF A S +SF  LK+RIE      +         VDF+ ++K  F  PP   +K     F+ V
Sbjct:  141 TMLLGAAKLLKEHEEELQGTVVLVFQPAEEGGGGAKKIVEAGVLENVSAIFGLHVTNQLALGQVSSREGPMLAGSGFFKAKISGKGGHAALPQHTIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKFEGGGAFNVIPDSVTIGGTFRAFSTKSFMQLKKRIEQVITRQASV-NMCNATVDFIEEEKPFF--PPTVNDKALHQFFKNV 347          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSJ (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. japonica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.977e-69
Identity = 142/223 (63.68%), Postives = 166/223 (74.44%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIEGGFHLASPP*KKAVQLVDFLVKKKTLFSSPPKKKNKFAQNIFQTVFLENLFEKLTKD 669
            V MLLG+A+ILQEHR+ELKGTVVLVFQPAEEGGGGA K+++ G +E + AIFG+HV   +PIG VASRPGP++AGSGFFEAVI GKGGHAA+P H+IDPILAASNVIVSLQ LVSREADPLDSQVVTV K QGGGAFN IP SV IGGTF A  KESF  LKQRIE    ++    ++   +VDFL K +  F  PP   +    + F  V  E +  K  +D
Sbjct:  141 VAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGAVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDSVTIGGTFRAFLKESFNQLKQRIEEVI-VSQASVQRCNAVVDFLDKDRPFF--PPTINSAGLHDFFVKVASEMVGPKNVRD 360          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL1_ORYSI (IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sativa subsp. indica GN=ILL1 PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.977e-69
Identity = 142/223 (63.68%), Postives = 166/223 (74.44%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIEGGFHLASPP*KKAVQLVDFLVKKKTLFSSPPKKKNKFAQNIFQTVFLENLFEKLTKD 669
            V MLLG+A+ILQEHR+ELKGTVVLVFQPAEEGGGGA K+++ G +E + AIFG+HV   +PIG VASRPGP++AGSGFFEAVI GKGGHAA+P H+IDPILAASNVIVSLQ LVSREADPLDSQVVTV K QGGGAFN IP SV IGGTF A  KESF  LKQRIE    ++    ++   +VDFL K +  F  PP   +    + F  V  E +  K  +D
Sbjct:  141 VAMLLGSARILQEHRDELKGTVVLVFQPAEEGGGGAKKMIDDGTVENIEAIFGVHVADVVPIGVVASRPGPVMAGSGFFEAVISGKGGHAALPHHTIDPILAASNVIVSLQQLVSREADPLDSQVVTVGKFQGGGAFNVIPDSVTIGGTFRAFLKESFNQLKQRIEEVI-VSQASVQRCNAVVDFLDKDRPFF--PPTINSAGLHDFFVKVASEMVGPKNVRD 360          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.326e-60
Identity = 130/215 (60.47%), Postives = 155/215 (72.09%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIEGGFHLASPP*KKAVQLVDFLVKKKTLFSSPPKKKNKFAQNIFQTVFLENL 648
            TMLLGAAK+L+EH+EEL+GTV+LVFQPAEEGG GA K++EAGVLE V AIFGLHV   L +G+++SR G L+AGSG F+A I GKGGHAA+PQ +IDP+LAASNVI+SLQHLVSREADPLDSQVVTVA  +G  AFN IP SV IGGTF AL  +SF  LKQRI       +         VDFL  +   F  PP   NK     ++ V ++ L
Sbjct:  141 TMLLGAAKLLKEHQEELQGTVILVFQPAEEGGAGAKKIVEAGVLENVGAIFGLHVSNLLGLGQLSSREGLLMAGSGRFKATISGKGGHAALPQFAIDPVLAASNVILSLQHLVSREADPLDSQVVTVATFEGSDAFNVIPDSVTIGGTFRALLPKSFEQLKQRIVQVITTQASV-NMCNATVDFLEDETPPF--PPTVNNKTLHLFYKNVSVDML 352          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.563e-55
Identity = 121/215 (56.28%), Postives = 143/215 (66.51%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIEGGFHLASPP*KKAVQLVDFLVKKKTLFSSPPKKKNKFAQNIFQTVFLENL 648
            TMLLGAA+ILQE R EL+GTVVL+FQP EE G GA +++EAG ++ V AIFG HV   LP G V SRPGPLLAG GFFEAVI GKGGHAA P  S+DPILAAS V+++LQ LVSREADPL++QVVTV +   G A N IP+S+ IGGTF   S E F  LK+RIE    +A     +    VDF    + L   PP   +      FQ V  E L
Sbjct:  156 TMLLGAARILQERRHELQGTVVLLFQPGEEVGTGARRMVEAGAVDNVEAIFGFHVSVELPTGVVGSRPGPLLAGCGFFEAVITGKGGHAAHPHASVDPILAASTVVLALQGLVSREADPLEAQVVTVTRFLAGDALNVIPESITIGGTFRVFSNEGFLRLKRRIEEVI-VAQSAVYRCAAAVDFHAGGRPLL--PPTINSAALHAHFQAVAAETL 367          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 8.563e-55
Identity = 107/166 (64.46%), Postives = 131/166 (78.92%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            VTMLLGAAKIL EHR  L+GTVVL+FQPAEEG  GA K+ E G L+ V AIFG+H+   +P G+ ASR G  LAG+G FEAVI GKGGHAAIPQH+IDP++AAS++++SLQ LVSRE DPLDS+VVTV+K+ GG AFN IP S+ IGGT  A +   FT L+QR++
Sbjct:  143 VTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVK 306          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.755e-53
Identity = 104/166 (62.65%), Postives = 129/166 (77.71%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            V MLLGAAKILQ+HR+ L+GTVVL+FQPAEEG  GA  + E G L+ V AIFG+H+ P  P G+ AS  G  +AG+G FEAVI GKGGHAAIPQH+IDP++AAS++++SLQHLVSRE DP DS+VVTV K+ GG AFN IP S+ IGGT  A +   FT L++RI+
Sbjct:  142 VAMLLGAAKILQQHRQHLQGTVVLIFQPAEEGLSGAKMMREEGALKNVEAIFGIHLSPRTPFGKAASLAGSFMAGAGAFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQHLVSRETDPSDSKVVTVTKVNGGNAFNVIPDSITIGGTLRAFT--GFTQLQERIK 305          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL7_ORYSJ (IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sativa subsp. japonica GN=ILL7 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.183e-50
Identity = 100/165 (60.61%), Postives = 128/165 (77.58%), Query Frame = 1
Query:    4 TMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            TMLLGAAK+LQ  +++LKGTV LVFQPAEEG  GA  VL+ GVL+ V+AIFGLHVDP + +G V SRPGP LA SG F A I GKGGHAA P +++DPIL AS+ IVSLQ +V+RE DPL++ V++V  ++GG A+N IP+SV  GGTF +L+ E  + LK+RI+
Sbjct:  163 TMLLGAAKLLQSQKDDLKGTVKLVFQPAEEGYAGARYVLQEGVLDDVSAIFGLHVDPRIQVGTVTSRPGPFLAASGRFLATITGKGGHAAGPHNAVDPILTASSAIVSLQQIVARETDPLEAAVISVTFMKGGDAYNVIPESVSFGGTFRSLTSEGLSYLKKRIK 327          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL8_ORYSJ (IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sativa subsp. japonica GN=ILL8 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.376e-49
Identity = 92/165 (55.76%), Postives = 126/165 (76.36%), Query Frame = 1
Query:    1 VTMLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRI 495
            VTMLLGAAK+LQ  ++ELKGT+ LVFQPAEEG  GA+ VLE+G+L+ V+ IFGLHV PNLP+G VASRPGP ++ +  F A   GKGGHA +P  ++DP++A S+ ++SLQ LVSRE DPL++ VV++  ++GG A+N IP+S  +GGTF +++ E    L +RI
Sbjct:  151 VTMLLGAAKLLQSRKDELKGTIKLVFQPAEEGHAGAYHVLESGLLDDVSVIFGLHVIPNLPVGVVASRPGPFMSAAARFAATFTGKGGHAGVPHDAVDPVVAVSSAVLSLQQLVSRETDPLEAAVVSITILKGGDAYNVIPESASLGGTFRSMTDEGLAYLMKRI 315          
BLAST of DY305306 vs. ExPASy Swiss-Prot
Match: ILL9_ORYSJ (IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sativa subsp. japonica GN=ILL9 PE=2 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.043e-48
Identity = 96/164 (58.54%), Postives = 124/164 (75.61%), Query Frame = 1
Query:    7 MLLGAAKILQEHREELKGTVVLVFQPAEEGGGGAHKVLEAGVLEKVNAIFGLHVDPNLPIGEVASRPGPLLAGSGFFEAVIGGKGGHAAIPQHSIDPILAASNVIVSLQHLVSREADPLDSQVVTVAKIQGGGAFNGIPKSVLIGGTFPALSKESFTPLKQRIE 498
            MLLGAAK+LQ+ + ELKGTV LVFQPAEEG  GA+ VL+ GVL+ V+A+FG+HVDP LP+G VA+RPGP  A SG F A I GKGGHAA P  +IDP++AASN I+SLQ +V+RE DPL   VV++  ++GG A+N IP+SV  GGT  +++ E    L +RI+
Sbjct:  149 MLLGAAKLLQKRKNELKGTVKLVFQPAEEGSAGAYYVLQEGVLDDVSAMFGMHVDPALPVGVVAARPGPFAATSGRFLATITGKGGHAAFPHDAIDPVVAASNAILSLQQIVAREIDPLQGAVVSITFVKGGEAYNVIPQSVEFGGTMRSMTDEGLAYLMKRIK 312          
The following BLAST results are available for this feature:
BLAST of DY305306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
ILL4_ARATH7.977e-6966.67IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsi... [more]
ILL1_ORYSJ7.977e-6963.68IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL1_ORYSI7.977e-6963.68IAA-amino acid hydrolase ILR1-like 1 OS=Oryza sati... [more]
ILL5_ARATH2.326e-6060.47IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
ILL2_ORYSJ8.563e-5556.28IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL2_ARATH8.563e-5564.46IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL1_ARATH2.755e-5362.65IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILL7_ORYSJ2.183e-5060.61IAA-amino acid hydrolase ILR1-like 7 OS=Oryza sati... [more]
ILL8_ORYSJ5.376e-4955.76IAA-amino acid hydrolase ILR1-like 8 OS=Oryza sati... [more]
ILL9_ORYSJ2.043e-4858.54IAA-amino acid hydrolase ILR1-like 9 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BC04RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305306 ID=DY305306; Name=DY305306; organism=Citrus clementina; type=EST; length=772bp
GTCACCATGCTTCTAGGTGCAGCAAAAATTCTTCAAGAGCACCGTGAGGA
GTTAAAGGGTACAGTTGTTCTGGTTTTCCAACCAGCCGAAGAAGGAGGTG
GAGGAGCCCACAAAGTGCTCGAAGCAGGAGTCCTGGAAAAAGTTAATGCC
ATATTTGGGTTACATGTCGACCCTAACTTACCCATAGGTGAAGTAGCTTC
AAGACCTGGTCCTCTGTTAGCTGGGAGTGGCTTCTTTGAAGCAGTAATAG
GTGGAAAAGGAGGTCATGCGGCCATTCCTCAGCATTCAATAGATCCAATA
TTGGCAGCTTCTAATGTGATTGTTAGTTTACAACATCTTGTTTCTCGTGA
AGCTGATCCACTTGATTCACAGGTCGTGACAGTTGCAAAAATTCAAGGAG
GTGGTGCATTCAATGGCATTCCAAAATCAGTATTAATTGGAGGCACTTTC
CCGGCCCTTTCAAAGGAAAGCTTCACCCCACTAAAGCAACGTATTGAAGG
AGGTTTTCATTTGGCAAGCCCGCCATAAAAAAAAGCAGTGCAACTGGTGG
ATTTCCTGGTCAAAAAAAAAACCCTTTTTTCCTCCCCCCCCAAAAAAAAA
AACAAATTTGCCCAAAATATTTTCCAAACTGTTTTTTTGGAAAATTTGTT
TGAAAAACTTACAAAAGATTAAAGGGTTTGGGCCCCCCCGTAAAAGGGAA
ATTTAAAAAAATTTCTCTTTTTTTACCCAAAAAAAAAATGGGCCCGAGAT
AAATTTCTTCTTCTTCTAGAGG
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