DY305317

Overview
NameDY305317
Unique NameDY305317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1276
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9281 contig Ccv1_Contig9281:1..1276. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.801e-15
Identity = 49/129 (37.98%), Postives = 79/129 (61.24%), Query Frame = 3
Query:  405 FSLYELQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLYG-----MKRKIEMRYRVNIGFRVSESLLY 773
            F + ++++AT++F+  N IG+GG+ EVYKG L NG  VA+KRL+R TSD+   +F +++ ++A + H N  +LLG+ ++G   I V E  PN  L   L+G      K +++   R NI   ++  LLY
Sbjct:  334 FDIKDIEAATSNFLASNKIGQGGFGEVYKGTLSNGTEVAVKRLSR-TSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKGQLDWTRRYNIIGGITRGLLY 461          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.149e-15
Identity = 49/128 (38.28%), Postives = 77/128 (60.16%), Query Frame = 3
Query:  405 FSLYELQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLYGMKRKI----EMRYRVNIGFRVSESLLY 773
            F L  + +AT++F  +N +G+GG+  VYKG L+NGQ VA+KRLT+G+    I +F +++ ++  + H N  KLLG+  EG   I V E  PN  L   ++  +++     EMRYR+  G  ++  LLY
Sbjct:  341 FDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTKGSGQGDI-EFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIFDDEKRSLLTWEMRYRIIEG--IARGLLY 465          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: CRK6_ARATH (Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana GN=CRK6 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.064e-14
Identity = 47/121 (38.84%), Postives = 76/121 (62.81%), Query Frame = 3
Query:  420 LQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLYGMKRKIEMRY--RVNIGFRVSESLLY 773
            +Q+ATNDF   N IG+GG+ EVYKG   NG+ VA+KRL++  S +  A+F +++ ++A + H N  +LLG+ ++G   I V E  PN  L  LL+   ++I++ +  R NI   ++  +LY
Sbjct:  344 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSK-NSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQIQLDWMQRYNIIGGIARGILY 463          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.390e-14
Identity = 46/127 (36.22%), Postives = 78/127 (61.42%), Query Frame = 3
Query:  405 FSLYELQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGG-MHIVLELSPNGRLTSLLYGMKR---KIEMRYRVNIGFRVSESLLY 773
            FSL +++ ATN+F   N IG+GG+  VYKG+L +G ++A+K+L+ G S +   +FL+++G+++ ++HPN  KL G  +EGG + +V E   N  L   L+G +    +++   R  I   V+  L Y
Sbjct:  612 FSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLSTG-SKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAY 737          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: CRK38_ARATH (Cysteine-rich receptor-like protein kinase 38 OS=Arabidopsis thaliana GN=CRK38 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.371e-14
Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 3
Query:  372 YSYDSQSPHNIFSLYELQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLYGMKRKI----EMRYRVNIGFRVSESLLY 773
            Y Y  QS    F    + +AT+DF F+N IG+GG+  VYKG+L  G+ +A+KRLTRG+    I +F +++ ++  + H N  KLLG+  EG   I V E  PN  L   ++  ++++    +MR R+  G  V+  L+Y
Sbjct:  317 YDYGGQSKLR-FDFRMILTATDDFSFENKIGQGGFGSVYKGKLPGGEEIAVKRLTRGSGQGEI-EFRNEVLLLTRLQHRNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEEKRLLLTWDMRARIIEG--VARGLVY 451          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.371e-14
Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = 3
Query:  405 FSLYELQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLY-GMKRKI---EMRYRVNIGFRVSESLLY 773
            F    +++ATN F   N +G GG+ EVYKG+LI G+ VAIKRL++G S +   +F +++ ++A + H N AKLLGY ++G   I V E  PN  L   L+   KR++   + RY++  G  ++  +LY
Sbjct:  335 FQFSAIEAATNKFSESNKLGHGGFGEVYKGQLITGETVAIKRLSQG-STQGAEEFKNEVDVVAKLQHRNLAKLLGYCLDGEEKILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEG--IARGILY 459          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 4.044e-14
Identity = 46/121 (38.02%), Postives = 75/121 (61.98%), Query Frame = 3
Query:  420 LQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLYGMKRKIEMRY--RVNIGFRVSESLLY 773
            +Q+ATNDF   N IG+GG+ EVYKG   NG+ VA+KRL++  S +  A+F +++ ++A + H N  +LLG+ ++G   I V E  PN  L  LL+   ++ ++ +  R NI   ++  +LY
Sbjct:  346 IQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSK-NSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTKQTQLDWMQRYNIIGGIARGILY 465          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: WAKLB_ARATH (Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.471e-13
Identity = 42/127 (33.07%), Postives = 77/127 (60.63%), Query Frame = 3
Query:  402 IFSLYELQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLYGMKRKIEMRY--RVNIGFRVSESLLY 773
            IFS +EL+ AT++F    ++G+GG   VYKG L++G++VA+KR ++   ++ + +F++++ ++A + H N  KLLG  +E  + + V E  PNG L   L+       M +  R++I   ++ +L Y
Sbjct:  403 IFSSHELEKATDNFNKNRVLGQGGQGTVYKGMLVDGRIVAVKR-SKAVDEDRVEEFINEVVVLAQINHRNIVKLLGCCLETEVPVLVYEFVPNGDLCKRLHDESDDYTMTWEVRLHIAIEIAGALSY 528          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 4.471e-13
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 3
Query:  405 FSLYELQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLYG--MKRKIEMRYRVNIGFRVSESLLY 773
            F    +++ATN F+  N +G+GG+ EVYKG L +G  VA+KRL++ TS +   +F +++ ++A + H N  KLLGY +EG   I V E  PN  L   L+   MK K++   R  I   ++  +LY
Sbjct:  314 FDFKAIEAATNCFLPINKLGQGGFGEVYKGTLSSGLQVAVKRLSK-TSGQGEKEFENEVVVVAKLQHRNLVKLLGYCLEGEEKILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILY 438          
BLAST of DY305317 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.627e-13
Identity = 47/128 (36.72%), Postives = 73/128 (57.03%), Query Frame = 3
Query:  405 FSLYELQSATNDFIFKNLIGKGGYAEVYKGRLINGQLVAIKRLTRGTSDEIIADFLSQLGIMAHVYHPNTAKLLGYGIEGGMHI-VLELSPNGRLTSLLYGMKRKI----EMRYRVNIGFRVSESLLY 773
            F L  +  AT+DF  +N +G+GG+  VYKG   NGQ VA+KRLT+G S +   +F +++ ++  + H N  KLLG+  EG   I V E  PN  L   ++   ++     E+R+R+  G  ++  LLY
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTKG-SGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDKRSLLTWEVRFRIIEG--IARGLLY 460          
The following BLAST results are available for this feature:
BLAST of DY305317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CRK30_ARATH2.801e-1537.98Putative cysteine-rich receptor-like protein kinas... [more]
CRK39_ARATH8.149e-1538.28Putative cysteine-rich receptor-like protein kinas... [more]
CRK6_ARATH1.064e-1438.84Cysteine-rich receptor-like protein kinase 6 OS=Ar... [more]
Y1534_ARATH1.390e-1436.22Probable LRR receptor-like serine/threonine-protei... [more]
CRK38_ARATH2.371e-1436.69Cysteine-rich receptor-like protein kinase 38 OS=A... [more]
CRK25_ARATH2.371e-1439.06Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK8_ARATH4.044e-1438.02Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
WAKLB_ARATH4.471e-1333.07Wall-associated receptor kinase-like 2 OS=Arabidop... [more]
CRK19_ARATH4.471e-1338.10Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK40_ARATH7.627e-1336.72Cysteine-rich receptor-like protein kinase 40 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAH3BE03RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305317 ID=DY305317; Name=DY305317; organism=Citrus clementina; type=EST; length=1276bp
GATTCTAGTTTCTTTCTTGACTGAGATTTTATGACTGGACTTATAAACAT
AATTTACAATGCTCTGTTCTCATCCCCTGTTTCTGGTCCAGATTTTATAA
TATCTGGACATGGACAACAAGGAATATTCATGCTCGCCTGTTGGGGTTCT
TGATGACTATTTTCGAAACAAACACTCCTATACATGTTCTTCAAATACCC
TTGCTCTGAAACTTCCCAGAATCCCCATCCCATTCTCGCTGGCATTTATT
CTACCACTTAGTCACAGACAACTCCAATAAAACGTTATTCACATTGTATC
CCCTCAAGCTTTCGGTAGCAACAACCACTACTATGAGACAGGGCATTGAT
ATGCCCAGGAATCTTTTTGTTTATTCCTACGATTCACAGTCTCCCCACAA
CATTTTCTCCCTCTATGAGCTGCAATCCGCCACCAACGATTTCATCTTCA
AAAATTTGATTGGAAAGGGAGGTTATGCTGAAGTTTACAAAGGGCGTTTG
ATAAATGGGCAGCTTGTGGCAATCAAACGGCTAACAAGAGGTACATCAGA
TGAGATTATAGCGGACTTTTTATCGCAGCTTGGGATTATGGCTCATGTCT
ATCATCCTAATACTGCTAAGTTATTAGGATATGGGATTGAAGGAGGCATG
CACATTGTTCTTGAATTGTCCCCTAATGGACGCTTAACTTCTCTCCTTTA
TGGTATGAAACGAAAAATTGAAATGCGTTATCGAGTAAACATTGGGTTTA
GGGTAAGTGAAAGCTTACTTTATCCATTTTAAGGGCTGACCCACGACAAA
TAATCCTAGGGAATTTGACGCCGCCCGAGATTCTGCCCCCTGAGGACTTC
AAGCCCTCAAATTTGAATTTTTGAATTACCGAAAAGGTCACCGGAGCCAA
GGACTCAAACCCAAATATCCCCATTTTGAAAGTCCCTTTTGGGCTTTCTC
CTCCCGGACATCCTTTATGGAGGGAAATTAAAAGGAGAAAAAAATATTCT
CTCGTCCCTATTCNGTTCTAATNCATAGAGTNTCAATGAAGACGACCCCC
ACAGGCTCTCTATTTTCTTTCCCATACTATCCCGTGTTATATTCTGGACG
ATATGCTCCGATTGTTTTTNATTAATCAGGGNGGNTNTTTAATATNTCTT
TCGTCGACTTCCCCTGCCCCNTAGCGTTGAAGACTATGGAGAATATTTGC
TCTACGCACGCAAGTTTATACCTCAGTTGGTTTCTTTCTATCCTGTGTTC
GTCGCTGGGACCACCTTCATCCCCAT
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