DY305318

Overview
NameDY305318
Unique NameDY305318
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1227
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305318 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 2.764e-28
Identity = 65/121 (53.72%), Postives = 79/121 (65.29%), Query Frame = 1 
Query:   37 MLEKLWDDVVAGPQPDRGLGRLRKITTTPLAVKEGGEAESSSGKFQRSLSMXXXXXXXXXXXXXXXXXXXRKDNVWRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 399
            +L+KLWDD+VAGPQP+RGLG LRK+   PL +K+ GE+           S                    RKDNVWRSVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:    3 LLDKLWDDIVAGPQPERGLGMLRKVPQ-PLNLKDEGES-----------SKITMPTTPTTPVTPTTPISARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of DY305318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN2.764e-2853.72Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH3BE07RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305318 ID=DY305318; Name=DY305318; organism=Citrus clementina; type=EST; length=1227bp
GATTTAGAAACTAGCAGCTAAATTGTAAATTTAAAGATGCTAGAGAAGCT
TTGGGACGATGTTGTGGCAGGGCCTCAGCCTGATCGTGGCCTTGGCAGGC
TGAGGAAAATCACCACAACACCCTTAGCAGTCAAAGAGGGTGGTGAGGCG
GAGTCGTCGTCGGGCAAGTTCCAGAGGTCTCTGTCAATGCCAGCGAGTCC
AGGGGCACCGTCGACGCCAGTGACGCCGACGACGCCGCTGTCGGCGCGTA
AGGACAACGTGTGGAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCTACT
AGGGGTATCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTCTCC
CACTGTTTATGACTGGCTTTACAGTGGGGAGACTAGGAGCAAGCATCATC
ACTGAGTGGATGATACGCTCCAGCGATGTAAATGAATGTGATGGGTCACC
AACTCACCGGATGAGTTGCCTGTAGTCTGTAGATAGTGTCGTTTCGTTTT
GGATTTCGCAACGTGTCCTTGTCGTTTTGTTAATGCTATTTGTATTACGT
GTCCTTCCTATCTAAAGTTTGGTTTTAAAATGCTGCTGACTAAAAGTAAA
CTAAAGACTGTGATGTTTTTATATCATATAATTTAATAATTGGATGTGAT
GTGAGGAATGCTAAGCTGTGGGCGGAGATGAAAGGTTGCTGGGTTTTGGG
TTAAGGACATGTTTTTGATTGTCATTTTGGAAAAGCCAAAATCATCCCTT
TCGTGGACGGTCCGGGATAACCATAAAGGGTTTTATTAATAAAAATAAGT
TGCCTTCTCTAAAAAAAAAAAAAAAAAAAATTCGGGGGGGGAGCGCCCGG
AACCGAGTCCACGAAAAGAAGAAACGAATAAAGAGTCCGAGGGCCCCCGT
TTTAAAAAAGTCTAGGAGGGGGAAGAACGGCGAGAGTTACACCACTTAGA
TGCCACTGGGAAAAAAATCGCACCTTGCAGCGCGATGGGTGAAAAATAAG
AAAAAAAGGGATCAGAACCAAGTATCCCGTTATGGCAAAAATAGTTAGCC
GAAGTGCGGAAAGGGGTGCAAAAAAGGAAACAAAGATGAGGAACCCTCGC
TAATTTGATAAGTAATGTTAAAAAATTCTCAAGAGGTGACTAGATATTGC
TATGTATGTAAGCAGCAGTCAACCGCACCATCAACTGTTGTTTAAAATAA
TGCTGTCGGGTTTATTAGTATGAAGAC
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