DY306208

Overview
NameDY306208
Unique NameDY306208
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1023
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5944 contig Ccv1_Contig5944:86..1108. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 OS=Arabidopsis thaliana GN=RPN11 PE=2 SV=1)

HSP 1 Score: 531.946 bits (1369), Expect = 2.203e-150
Identity = 271/307 (88.27%), Postives = 276/307 (89.90%), Query Frame = 1
Query:    1 RLQRMFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTVIF 921
            RLQR+F      LGH  PDSPTLD+SEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFR INPQT+MLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYR                WTDGLTL RFD HSKTNEQTVQEML+LA KYNKAVQEEDEL PEKLAI NVGRQDAKKHLEEHVS LMSSNIVQTLGTMLDTV+F
Sbjct:    3 RLQRIFGAGGG-LGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTLGTMLDTVVF 308          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2)

HSP 1 Score: 454.907 bits (1169), Expect = 3.422e-127
Identity = 226/292 (77.40%), Postives = 246/292 (84.25%), Query Frame = 1
Query:   46 PPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTVIF 921
            PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRV+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLIN   M+LG EPRQTTSNLGHLNKPSIQALIHGLNRHYYSI INYR                W +GLTL  +  H K NE  V+EML LA  YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV  LM+SNIVQ L  MLDTV+F
Sbjct:   18 PPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1)

HSP 1 Score: 454.907 bits (1169), Expect = 3.422e-127
Identity = 226/292 (77.40%), Postives = 246/292 (84.25%), Query Frame = 1
Query:   46 PPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTVIF 921
            PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTVRV+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLIN   M+LG EPRQTTSNLGHLNKPSIQALIHGLNRHYYSI INYR                W +GLTL  +  H K NE  V+EML LA  YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV  LM+SNIVQ L  MLDTV+F
Sbjct:   18 PPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVF 309          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1)

HSP 1 Score: 446.047 bits (1146), Expect = 1.589e-124
Identity = 217/292 (74.32%), Postives = 248/292 (84.93%), Query Frame = 1
Query:   46 PPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTVIF 921
            PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV+V+DVFAMPQ+GTGVSVEAVD VFQ  MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLINP  ++LGQEPRQTTSNLGHL KPS+QALIHGLNRHYYSI+INYR                W DGLTL  ++ H   NE TV EML+LA  YNK++++E+++ PE+LAI NVG+QD K+HLEE V  +M +NIVQ LG MLDT++F
Sbjct:   16 PPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSNLGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSINEDTVAEMLDLAKNYNKSLEDEEKMTPEQLAIKNVGKQDPKRHLEEKVDKVMQNNIVQCLGAMLDTIVF 307          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: PSDE_CAEEL (26S proteasome non-ATPase regulatory subunit 14 OS=Caenorhabditis elegans GN=rpn-11 PE=1 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 4.964e-110
Identity = 199/291 (68.38%), Postives = 229/291 (78.69%), Query Frame = 1
Query:   40 GHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDT 912
            G  P DS  +D+SE VYISSLALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV V+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEAL+ RAVAVVVDPIQSVKGKVVIDAFR INPQ+M L QEPRQTTSNLGHL KPSIQALIHGLNRHYYSI I YR                W D +++  +    + N++ ++ ML LA  Y KA+++E  +  ++LAI NVG+ D K+H+ + VS +++ NIVQ+L  M+ T
Sbjct:   18 GANPQDSNQVDTSETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSDRAVAVVVDPIQSVKGKVVIDAFRTINPQSMALNQEPRQTTSNLGHLQKPSIQALIHGLNRHYYSIPIAYRTHDLEQKMLLNLNKLSWMDAVSVENYSKCGEQNKEHLKAMLKLAKNYKKALEDEKNMTDQELAIKNVGKMDPKRHIADEVSKMLNDNIVQSLAGMMAT 308          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe GN=rpn11 PE=1 SV=2)

HSP 1 Score: 394.045 bits (1011), Expect = 7.168e-109
Identity = 197/289 (68.17%), Postives = 224/289 (77.51%), Query Frame = 1
Query:   55 DSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTVIF 921
            D P +D+SE VYISSLALLKML+HGR G PMEVMGLMLGEFVD++TVRVVDVFAMPQSGTGVSVEAVD VFQ NM+DMLKQTGRPEMVVGWYHSHPGFGCWLS VDINTQQSFE L  RAVAVVVDPIQSVKGKVVIDAFRLINP T+M+GQEPRQTTSNLGH+NKPSIQALIHGL RHYYS+ INY+                W  GL L  F+  ++ N  ++ +M +L+ +Y + VQ E  L PE+L I  VG+QD KKHL+  V   + +NI   L  MLD+V F
Sbjct:   20 DQPLVDNSECVYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAFRLINPSTLMMGQEPRQTTSNLGHINKPSIQALIHGLGRHYYSLRINYKKTELEEIMLLNLHKQPWAHGLLLENFNSAAEKNHASIDKMKSLSEQYTERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQKCIDNNISSMLACMLDSVAF 308          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: PSDE_DICDI (26S proteasome non-ATPase regulatory subunit 14 OS=Dictyostelium discoideum GN=psmD14 PE=3 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 1.448e-101
Identity = 181/288 (62.85%), Postives = 220/288 (76.39%), Query Frame = 1
Query:   58 SPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTVIF 921
            +P  D++E ++ISSLALLKML+H RAGVP+EVMGLMLGE +DEYT+RV+DVFAMPQSGT VSVEA+D VFQT MLDMLKQTGR E+V+GWYHSHPGFGCWLS VD+NTQQSFE L  RAVAVVVDP+QSV+GKVVIDAFR I         EPRQ TSNLGHL  PSIQALIHGLNR+YYSIAINYR                WT+GL + +FD H ++NE+ +  +L L  +Y K++Q+ED++ PEK  ++ VG+ D K+HL   V  LM++N+V+ L  MLDTV F
Sbjct:   22 TPLPDTAETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIRVIDVFAMPQSGTSVSVEAIDPVFQTKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSVDVNTQQSFEQLQSRAVAVVVDPLQSVRGKVVIDAFRTIKTSPT---AEPRQITSNLGHLQDPSIQALIHGLNRNYYSIAINYRKNELEQKMLLNLHKKKWTEGLIVDKFDTHEQSNEKQINNLLELTKQYQKSIQDEDKIEPEKKEVSAVGKLDPKRHLISDVHTLMANNVVRVLTVMLDTVTF 306          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: RPN11_ASHGO (26S proteasome regulatory subunit RPN11 OS=Ashbya gossypii GN=RPN11 PE=3 SV=1)

HSP 1 Score: 362.073 bits (928), Expect = 3.019e-99
Identity = 185/306 (60.46%), Postives = 221/306 (72.22%), Query Frame = 1
Query:    1 RLQR-MFXXXXXXLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTV 915
            RLQR M       +G    + P  D+ E VYISSLALLKMLKH RAGVPMEVMGLMLG+FVDEYTV VVDVFAMPQSGTGVSVEAVD VFQ  M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD++TQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+P T++  QEPRQTTSN+G LNKP+IQ+LIHGLNRHYYS+ I+Y                 W  GL +H +    + N +  ++ + +A +Y K ++EE EL  ++L    VG+QD KKHL E    ++  NIV  L   +++V
Sbjct:    3 RLQRLMMSQRSNMIGAAATEMPLDDTKETVYISSLALLKMLKHSRAGVPMEVMGLMLGDFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVDTQRSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLISPATVVRNQEPRQTTSNVGLLNKPNIQSLIHGLNRHYYSLNIDYHKTSAELNMLMNLHKEQWQSGLKMHDYKEKERINLEATKKSVRIAEQYTKRIEEEKELTEDELKTRYVGKQDPKKHLSETAERVLEENIVSVLTAGVNSV 308          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: RPN11_YEAST (26S proteasome regulatory subunit RPN11 OS=Saccharomyces cerevisiae GN=RPN11 PE=1 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 2.392e-96
Identity = 178/282 (63.12%), Postives = 210/282 (74.47%), Query Frame = 1
Query:   70 DSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTV 915
            D+ E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFVD+YTV VVDVFAMPQSGTGVSVEAVD VFQ  M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+   ++   EPRQTTSN G LNK +IQALIHGLNRHYYS+ I+Y                 W  GL ++ ++   ++N    + M+ +A +Y+K ++EE EL  E+L    VGRQD KKHL E     + +NIV  L   +++V
Sbjct:   22 DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQSGTGVSVEAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNSRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNLEPRQTTSNTGLLNKANIQALIHGLNRHYYSLNIDYHKTAKETKMLMNLHKEQWQSGLKMYDYEEKEESNLAATKSMVKIAEQYSKRIEEEKELTEEELKTRYVGRQDPKKHLSETADETLENNIVSVLTAGVNSV 303          
BLAST of DY306208 vs. ExPASy Swiss-Prot
Match: RPN11_CANGA (26S proteasome regulatory subunit RPN11 OS=Candida glabrata GN=RPN11 PE=3 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.714e-94
Identity = 175/282 (62.06%), Postives = 206/282 (73.05%), Query Frame = 1
Query:   70 DSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRXXXXXXXXXXXXXXXXWTDGLTLHRFDCHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSXLMSSNIVQTLGTMLDTV 915
            D+ E VYISS+ALLKMLKHGRAGVPMEVMGLMLGEFVDEYTV VVDVFAMPQSGTGVSVEAVD VFQ  M+DMLKQTGR +MVVGWYHSHPGFGCWLS VD+NTQ+SFE LN RAVAVVVDPIQSVKGKVVIDAFRLI+   ++  QEPRQTTSN G +NK +IQALIHGLNRHYYS+ I+Y                 W  GL +  +      N +  + M+ +A +Y+K ++EE EL  E+L    VG+QD KKHL +     +  N V  L   ++++
Sbjct:   22 DTKETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVNVVDVFAMPQSGTGVSVEAVDDVFQARMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFEQLNNRAVAVVVDPIQSVKGKVVIDAFRLIDTGALINNQEPRQTTSNSGLMNKANIQALIHGLNRHYYSLNIDYHKTPAETKMLLNLHKEQWQSGLKMQDYQEKETENLEATKRMVAVAQQYSKRIEEEKELSEEELKTRYVGKQDPKKHLAKTAENTLEENTVSVLTAGVNSI 303          
The following BLAST results are available for this feature:
BLAST of DY306208 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PSDE_ARATH2.203e-15088.2726S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_MOUSE3.422e-12777.4026S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_HUMAN3.422e-12777.4026S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_DROME1.589e-12474.3226S proteasome non-ATPase regulatory subunit 14 OS... [more]
PSDE_CAEEL4.964e-11068.3826S proteasome non-ATPase regulatory subunit 14 OS... [more]
RPN11_SCHPO7.168e-10968.1726S proteasome regulatory subunit rpn11 OS=Schizos... [more]
PSDE_DICDI1.448e-10162.8526S proteasome non-ATPase regulatory subunit 14 OS... [more]
RPN11_ASHGO3.019e-9960.4626S proteasome regulatory subunit RPN11 OS=Ashbya ... [more]
RPN11_YEAST2.392e-9663.1226S proteasome regulatory subunit RPN11 OS=Sacchar... [more]
RPN11_CANGA1.714e-9462.0626S proteasome regulatory subunit RPN11 OS=Candida... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA96CG07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306208 ID=DY306208; Name=DY306208; organism=Citrus clementina; type=EST; length=1023bp
CGATTGCAAAGAATGTTCGCTGGTGCCGGTGGCGCCTTGGGTCACCCGCC
ACCAGACTCCCCGACTCTTGATTCATCGGAGCAGGTCTACATCTCCTCAC
TCGCGCTCCTCAAGATGCTCAAACACGGTAGAGCTGGTGTGCCCATGGAG
GTCATGGGTCTGATGCTGGGAGAGTTTGTGGACGAGTACACAGTTCGGGT
TGTTGATGTGTTTGCTATGCCACAAAGTGGAACTGGTGTTAGTGTTGAAG
CTGTTGATCATGTGTTCCAGACTAACATGCTTGACATGCTCAAGCAGACT
GGAAGACCAGAAATGGTTGTTGGATGGTATCACTCACATCCTGGATTTGG
TTGCTGGCTCTCTGGTGTTGACATAAACACACAGCAGAGTTTTGAAGCTT
TGAATCAAAGGGCTGTTGCTGTGGTTGTGGATCCAATCCAGAGCGTGAAA
GGGAAGGTAGTGATTGATGCCTTCCGCTTGATTAATCCCCAAACCATGAT
GCTTGGCCAAGAACCACGGCAGACAACTTCCAATCTTGGTCATCTTAATA
AGCCATCCATCCAAGCATTGATCCATGGCTTGAATAGACATTATTATTCT
ATTGCCATCAATTACAGGAAGAATGAACTTGAAGAAAAGATGCTACTAAA
TCTGCACAAGAAGAAATGGACTGATGGATTAACACTTCATCGCTTTGATT
GCCATTCCAAAACCAATGAACAGACTGTCCAGGAGATGTTAAATTTGGCT
GTCAAATATAACAAGGCAGTTCAAGAAGAAGACGAGCTGCCGCCAGAGAA
GCTGGCCATTGCTAATGTGGGAAGGCAAGATGCAAAGAAGCACCTTGAGG
AACATGTCTCCNACTTGATGTCCTCAAACATAGTTCAAACTTTGGGAACC
ATGCTTGATACAGTCATATTCTAGATGGTGGTTTGTTTTCTGTAGTTTCA
CTAGCTTCACTCTTGTTTGACTATTTGTATGGCATTTACCGTTTTGAATT
TGGGCTTTATAAATTTACATTTT
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