DY306213
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: RPN1_NEUCR (26S proteasome regulatory subunit rpn-1 OS=Neurospora crassa GN=rpn-1 PE=3 SV=2) HSP 1 Score: 378.637 bits (971), Expect = 3.144e-104 Identity = 191/270 (70.74%), Postives = 223/270 (82.59%), Query Frame = 3 Query: 168 APEELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKDADTDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAA-EDKALKRQLAFHLARQKICLELE 974 A EELSEEDQ+LK EL+MLVERLTE D +LYK ALEA+K SIKTSTSSMTAVPKPLKFLRPHYE + + Y++WPAGD+K SLAD LSV+GMTYSDE+R DTLKYRLL+P +DIGSWGHEY+RHLALEIG Y R+ D T ++ DL VLVP FL NAEADAVD++SELE+IE++ FLDENTYSRVCLYMVSMV LL YPDN+ F+R AH IY++Y Q TQAM LAIRL+D+ LI+ DF AA ED AL++QLAF +ARQ I LE E Sbjct: 44 ASEELSEEDQQLKSELEMLVERLTESDATLYKPALEAMKNSIKTSTSSMTAVPKPLKFLRPHYETMTKLYDEWPAGDDKSSLADVLSVIGMTYSDEDRQDTLKYRLLSPTQDIGSWGHEYVRHLALEIGEVYAKRIANDEPTQELVDLALVLVPLFLKSNAEADAVDLMSELEIIEELPKFLDENTYSRVCLYMVSMVNLLTYPDNETFLRVAHSIYKKYNQHTQAMVLAIRLNDLGLIEKDFEAADEDPALRKQLAFLIARQGIPLEFE 313
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: RPN1_YEAST (26S proteasome regulatory subunit RPN1 OS=Saccharomyces cerevisiae GN=RPN1 PE=1 SV=3) HSP 1 Score: 285.419 bits (729), Expect = 3.623e-76 Identity = 148/290 (51.03%), Postives = 194/290 (66.90%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKDADTDDIND----------------------LTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAEDKALKRQLAFHLARQKICLELEG 977 E+LSEED KLK +L++LVERL EDD SLY+A+L A+KESIK STSSMTAVPKPLKFLRP Y LC Y+KW + K SLAD LS+L MTYS+ + D+L+YRLL+ D WGHEY+RHLALEIG Y +++EKDA+ + +D L +VP+FL HN E DAVD+L E+E I+ + F+DENT+ RVC YMV+ VPLL P++ F++TA+ IY + T A+ LA+RL + ++I+S F A D + +QLA+ LA QK E EG Sbjct: 36 EQLSEEDAKLKTDLELLVERLKEDDSSLYEASLNALKESIKNSTSSMTAVPKPLKFLRPTYPDLCSIYDKWTDPNLKSSLADVLSILAMTYSENGKHDSLRYRLLSDVSDFEGWGHEYIRHLALEIGEVYNDQVEKDAEDETSSDGSKSDGSAATSGFEFSKEDTLRLCLDIVPYFLKHNGEEDAVDLLLEIESIDKLPQFVDENTFQRVCQYMVACVPLLPPPEDVAFLKTAYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHKQLAYILAAQKTSFEYEG 325
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: RPN1_SCHPO (26S proteasome regulatory subunit rpn1 OS=Schizosaccharomyces pombe GN=rpn1 PE=1 SV=2) HSP 1 Score: 278.87 bits (712), Expect = 3.391e-74 Identity = 139/266 (52.26%), Postives = 192/266 (72.18%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKDADTDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAEDKALKRQLAFHLARQKICLEL 971 E+LSEED +LK++L++LV+ + + L ++L +KE I+TSTSSMTAVPKPLKFLRPHY L + Y+ WP +K LAD LSVLGM+YS+ + ++LKYRL D WGHEY+RHLA EI E+ +R E++A TDD+ +L +VPFFL+HNAEADA+D+L EL IE + F++ + SRVCLY+ S V LL +P++ +RTAH IYR++ Q TQA+ +AIRL DM LIK D AA D LK+Q+++ LARQ+I +++ Sbjct: 44 EDLSEEDLQLKNDLELLVQAVQDATPELVGSSLTQLKEIIRTSTSSMTAVPKPLKFLRPHYFTLVKIYDSWPQSPQKTQLADILSVLGMSYSNTSKHESLKYRLQGVTTDPSLWGHEYVRHLASEIEEEFASRQEEEAPTDDLMELALTIVPFFLTHNAEADAIDLLQELGAIEKVVPFVELDNASRVCLYITSCVNLLPFPEDVAMLRTAHAIYRKFDQLTQALNVAIRLDDMSLIKEDCEAATDPLLKKQMSYMLARQQIPMDM 309
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: RPN1_CANGA (26S proteasome regulatory subunit RPN1 OS=Candida glabrata GN=RPN1 PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 4.428e-74 Identity = 146/285 (51.23%), Postives = 191/285 (67.02%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKDAD--------------------TDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAEDKALKRQLAFHLARQKICLE 968 EELSEEDQKLK +L+MLV+ L EDD LY+ L +KE IK STSSMTAVPKPLKFLRP Y LC+AY+KW D+K SLAD LSVL MTYSD + D+L++RLL+ +I SWGHEY+RHLALEIG Y ++EK+A+ D I L+ +VP+F+ HN E DAVD+L E+E IE + F+DENTY RVC YM++ V LL P++ F++TA+ IY Q +A+ LAIRL + ++I+S F A D + +QLA+ LA Q++ E Sbjct: 36 EELSEEDQKLKGDLEMLVQTLLEDDSKLYETTLTQLKEFIKNSTSSMTAVPKPLKFLRPFYPDLCKAYDKWSDKDQKSSLADMLSVLAMTYSDTHQHDSLRFRLLSDTSNIASWGHEYVRHLALEIGEVYNEQVEKEAEDNSTSTESSPQPPHMNFEFSKDVILQLSLEIVPYFMKHNGEEDAVDLLLEIEAIEKLPQFVDENTYKRVCQYMIACVQLLPPPEDISFLQTAYSIYLSELQLPEALSLAIRLGNEDMIRSVFDATSDPIVHQQLAYILAAQRVPFE 320
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: PSMD2_RAT (26S proteasome non-ATPase regulatory subunit 2 OS=Rattus norvegicus GN=Psmd2 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.877e-65 Identity = 124/267 (46.44%), Postives = 186/267 (69.66%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKD-ADTDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAEDKALKRQLAFHLARQKICLEL 971 +ELSEED++L+DEL+MLVERL E D SLY+ ALE ++ I++ST+SMT+VPKPLKFLRPHY KL E YE G+ K AD +SVL MT S E + LKYRL+ +++ SWGHEY+RHLA E+ E+Q + + A + + L + +VP+ ++HNAE +A D+L E+E ++ ++ +DEN YS+VCLY+ S V + P+N +R A ++R++ +F +A+ LA+ L+DMEL++ F + +D +++Q+AF L R + LEL Sbjct: 43 QELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKCFAADIISVLAMTMSGER--ECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKAQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYSKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: PSMD2_MOUSE (26S proteasome non-ATPase regulatory subunit 2 OS=Mus musculus GN=Psmd2 PE=1 SV=1) HSP 1 Score: 248.054 bits (632), Expect = 6.410e-65 Identity = 123/267 (46.07%), Postives = 186/267 (69.66%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKD-ADTDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAEDKALKRQLAFHLARQKICLEL 971 +ELSEED++L+DEL+MLVERL E D SLY+ ALE ++ I++ST+SMT+VPKPLKFLRPHY KL E YE G+ K AD +SVL MT S E + LKYRL+ +++ SWGHEY+RHLA E+ E+Q + + A + + L + +VP+ ++HNAE +A D+L E+E ++ ++ +DEN Y++VCLY+ S V + P+N +R A ++R++ +F +A+ LA+ L+DMEL++ F + +D +++Q+AF L R + LEL Sbjct: 43 QELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKCFAADIISVLAMTMSGER--ECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKAQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: PSMD2_HUMAN (26S proteasome non-ATPase regulatory subunit 2 OS=Homo sapiens GN=PSMD2 PE=1 SV=3) HSP 1 Score: 246.128 bits (627), Expect = 2.436e-64 Identity = 122/267 (45.69%), Postives = 185/267 (69.29%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKD-ADTDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAEDKALKRQLAFHLARQKICLEL 971 +ELSEED++L+DEL+MLVERL E D SLY+ ALE ++ I++ST+SMT+VPKPLKFLRPHY KL E YE G+ K AD +SVL MT S E + LKYRL+ +++ SWGHEY+RHLA E+ E+Q + + + + L + +VP+ ++HNAE +A D+L E+E ++ ++ +DEN Y++VCLY+ S V + P+N +R A ++R++ +F +A+ LA+ L+DMEL++ F + +D +++Q+AF L R + LEL Sbjct: 43 QELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSGER--ECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: PSMD2_BOVIN (26S proteasome non-ATPase regulatory subunit 2 OS=Bos taurus GN=PSMD2 PE=1 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 2.436e-64 Identity = 122/267 (45.69%), Postives = 185/267 (69.29%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKD-ADTDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAEDKALKRQLAFHLARQKICLEL 971 +ELSEED++L+DEL+MLVERL E D SLY+ ALE ++ I++ST+SMT+VPKPLKFLRPHY KL E YE G+ K AD +SVL MT S E + LKYRL+ +++ SWGHEY+RHLA E+ E+Q + + + + L + +VP+ ++HNAE +A D+L E+E ++ ++ +DEN Y++VCLY+ S V + P+N +R A ++R++ +F +A+ LA+ L+DMEL++ F + +D +++Q+AF L R + LEL Sbjct: 43 QELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSGER--ECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKTQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: PSMD2_PONAB (26S proteasome non-ATPase regulatory subunit 2 OS=Pongo abelii GN=PSMD2 PE=2 SV=1) HSP 1 Score: 245.743 bits (626), Expect = 3.181e-64 Identity = 121/267 (45.32%), Postives = 185/267 (69.29%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKD-ADTDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAEDKALKRQLAFHLARQKICLEL 971 +ELSEED++L+DEL+MLVERL E D SLY+ ALE ++ I++ST+SMT+VPKPLKFLRPHY KL E YE G+ K AD +SVL MT S E + LKYRL+ +++ SWGHEY+RHLA E+ E+Q + + + + L + ++P+ ++HNAE +A D+L E+E ++ ++ +DEN Y++VCLY+ S V + P+N +R A ++R++ +F +A+ LA+ L+DMEL++ F + +D +++Q+AF L R + LEL Sbjct: 43 QELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSGER--ECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIIPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLEL 307
BLAST of DY306213 vs. ExPASy Swiss-Prot
Match: PSMD2_DICDI (26S proteasome non-ATPase regulatory subunit 2 OS=Dictyostelium discoideum GN=psmD2 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 2.134e-60 Identity = 123/263 (46.77%), Postives = 176/263 (66.92%), Query Frame = 3 Query: 174 EELSEEDQKLKDELDMLVERLTEDDKSLYKAALEAIKESIKTSTSSMTAVPKPLKFLRPHYEKLCEAYEKWPAGDEKLSLADTLSVLGMTYSDEERLDTLKYRLLAPNKDIGSWGHEYMRHLALEIGSEYQNRMEKDADTDDINDLTRVLVPFFLSHNAEADAVDILSELEMIEDIKDFLDENTYSRVCLYMVSMVPLLAYPDNDRFVRTAHDIYRQYKQFTQAMCLAIRLHDMELIKSDFAAAE-DKALKRQLAFHLARQKI 959 E LS ED+KLK++L++LVER ++ + + AALEA+K I++STSSMT+VPKPLKFLR HY L + Y+ G K SLAD LSVL M ++ER DTLKY+LL + I SWGHEY++HLA EIG EY + E++ +D+ L +VPF ++HNAE +A D+L E+E + I ++DEN YSRVCLY+ + PD+ ++ +IY + KQ+ A+ +A+++ D ELI F E +K++ +QL F +ARQKI Sbjct: 53 ETLSPEDEKLKNDLELLVERSRDEKEEIALAALEALKTEIRSSTSSMTSVPKPLKFLRNHYSTLVDIYKNSKEGKAKTSLADILSVLAMANGNDER-DTLKYKLLGSGEAIASWGHEYVKHLATEIGVEYDIKKEENQSVEDLLKLVDEIVPFQMTHNAEPEACDLLLEVEQLSKIFQYIDENNYSRVCLYLFKCSYYVPGPDDINILKVCVEIYIKMKQYPDALRVAMKISDPELITEIFKLVENNKSILQQLGFLVARQKI 314 The following BLAST results are available for this feature:
BLAST of DY306213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306213 ID=DY306213; Name=DY306213; organism=Citrus clementina; type=EST; length=1031bpback to top |