DY306215
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THOC5_XENTR (THO complex subunit 5 homolog OS=Xenopus tropicalis GN=thoc5 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 5.149e-30 Identity = 75/248 (30.24%), Postives = 135/248 (54.44%), Query Frame = 2 Query: 140 YEMLRDTKSSIEEIVSEMITIKSESKPKS--QLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQA 877 Y++ +DT ++ ++SE+ +K++ S ++ E Q ++F+TL+++NR + + + +T AK VD+ LQL NL+YE H K I C +F+SK+ +I+LV EEF+ +AP I ++++ SH L RL++EL QRK L + +++ K+ + + I + P+Q L + KQ +A LPPPLYV++ Q +A +A + + I G++++A+A Sbjct: 47 YQLYKDTCLDLQRLMSEIQDLKNKGGKDSAMEIEEKKVQSCVHFMTLKKLNRLAHIRLKKARDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYSEAPATISKPEITSTDSHQQTLSRLDWELEQRKRLAEKYKECLASKEKILKEIEIKKEYLNSLQPQLNSIMQASLPVQEYLSMPFDCMHKQYETARHLPPPLYVLFVQASAYSQACDRKLVVTIEGNVEEARA 294
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THO5B_XENLA (THO complex subunit 5 homolog B OS=Xenopus laevis GN=thoc5-B PE=1 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 5.149e-30 Identity = 75/248 (30.24%), Postives = 135/248 (54.44%), Query Frame = 2 Query: 140 YEMLRDTKSSIEEIVSEMITIKSESKPKS--QLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQA 877 Y++ +DT +++ ++SE+ +KS+ S ++ E Q ++F+TL+++NR + + + +T AK VD+ LQL NL+YE H K I C +F+SK+ +I+LV EEF+ DAP I ++++ H L RL++EL QRK L + +++ K+ + + I + P+Q L + KQ +A LP PLYV++ Q +A +A + + + I G++++A+A Sbjct: 47 YQLYKDTCVALQRLMSEIQDLKSKGSKDSAMEIEEKKIQSCVHFMTLKKLNRLANIRLKKARDQTHEAKQKVDAYNLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYSDAPAAISKPEITSTDPHQQTLSRLDWELEQRKRLAEKYKECLASKEKILKEIEIKKEYLNTLQPQLNSIMQASLPVQEYLSMPFDCMHKQYETARHLPAPLYVLFVQASAYSQACDQKLVVAIEGNVEEARA 294
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THOC5_DANRE (THO complex subunit 5 homolog OS=Danio rerio GN=thoc5 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 8.782e-30 Identity = 78/253 (30.83%), Postives = 137/253 (54.15%), Query Frame = 2 Query: 140 YEMLRDTKSSIEEIVSEMITIKS----ESKPKSQLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQAFAR 886 Y + ++T +++ +++SE+ +K+ + + +LR Q I+F+TL+++NR + + + +T AK VD LQL NL+YE H K I C +F+S++ +I+LV E+EF +DAP +I +++ + H L L RL++EL QRK L + ++ K+ +Q+ I + P+Q L + KQ A LPPPLYV++ Q A +A +N+ + I G + +A+A +R Sbjct: 52 YTLYKETCAALAKLMSEIQELKTSGAKDGSAEIELRR--KQSSIHFITLKKLNRLAHMRLKKGRDQTHEAKQRVDVLHLQLQNLLYEVMHLQKEIGKCLEFKSQHEEIELVSEDEFFQDAPAEISRPQVTREDHHQLTLARLDWELDQRKRLAEQYKTSLSSKEKIQKAIEQKREYLSSLQPGLHNIMQASLPVQEYLSMPFEHMQKQAEVARHLPPPLYVLFVQAGAYGQACDKNLTVSIRGDVDEAKALSR 302
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THOC5_RAT (THO complex subunit 5 homolog OS=Rattus norvegicus GN=Thoc5 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 2.555e-29 Identity = 76/248 (30.65%), Postives = 133/248 (53.63%), Query Frame = 2 Query: 140 YEMLRDTKSSIEEIVSEMITIKSESKPKS--QLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQA 877 YE+ + T ++ +++E+ +KS+ ++ E Q ++F+TL+++NR + + + +T AK VD+ LQL NL+YE H K I C +F+SK+ +IDLV EEF+ +AP I ++++ H L RL++EL QRK L + + + +K+ + + I + P+Q L + + KQ +A LPPPLYV++ Q TA +A + + + I GS+ +A+A Sbjct: 52 YELYKYTCQELQRLMAEIQDLKSKGSKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYSEAPPNISKAEITMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKA 299
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THOC5_MOUSE (THO complex subunit 5 homolog OS=Mus musculus GN=Thoc5 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 2.555e-29 Identity = 76/248 (30.65%), Postives = 133/248 (53.63%), Query Frame = 2 Query: 140 YEMLRDTKSSIEEIVSEMITIKSESKPKS--QLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQA 877 YE+ + T ++ +++E+ +KS+ ++ E Q ++F+TL+++NR + + + +T AK VD+ LQL NL+YE H K I C +F+SK+ +IDLV EEF+ +AP I ++++ H L RL++EL QRK L + + + +K+ + + I + P+Q L + + KQ +A LPPPLYV++ Q TA +A + + + I GS+ +A+A Sbjct: 52 YELYKYTCQELQRLMAEIQDLKSKGSKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYSEAPPSISKAEITMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKRDYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKA 299
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THOC5_HUMAN (THO complex subunit 5 homolog OS=Homo sapiens GN=THOC5 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 4.359e-29 Identity = 76/248 (30.65%), Postives = 133/248 (53.63%), Query Frame = 2 Query: 140 YEMLRDTKSSIEEIVSEMITIKSESKPKS--QLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQA 877 YE+ + T ++ +++E+ +KS ++ E Q ++F+TL+++NR + + + +T AK VD+ LQL NL+YE H K I C +F+SK+ +IDLV EEF+++AP I ++++ H L RL++EL QRK L + + + +K+ + + I + P+Q L + + KQ +A LPPPLYV++ Q TA +A + + + I GS+ +A+A Sbjct: 52 YELYKYTCQELQRLMAEIQDLKSRGGKDVAIEIEERRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKA 299
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THOC5_CHICK (THO complex subunit 5 homolog OS=Gallus gallus GN=THOC5 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 5.693e-29 Identity = 76/251 (30.28%), Postives = 136/251 (54.18%), Query Frame = 2 Query: 131 ISAYEMLRDTKSSIEEIVSEMITIKSESKPK--SQLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQA 877 I YE+ ++T ++ +++E+ +KS S++ E Q ++F+TL+++NR + + + +T AK VD+ LQL NL+YE H K I C +F+SK+ +I+LV EEF+ +AP +I ++ H L RL++EL QRK L + +++ + K+ + + I + P+Q L + + KQ +A LPPPLYV++ Q +A +A + + + I GS+++A+A Sbjct: 48 IKDYELYKETCQELQRLMAEIQELKSRGVKDNASEIDERRVQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSLEEFYSEAPTEISRPDITLTEPHQQTLARLDWELEQRKRLAERYKECQTIKEKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQASAYGQACDKKLVVAIEGSVEEAKA 298
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THOC5_BOVIN (THO complex subunit 5 homolog OS=Bos taurus GN=THOC5 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 7.435e-29 Identity = 75/248 (30.24%), Postives = 134/248 (54.03%), Query Frame = 2 Query: 140 YEMLRDTKSSIEEIVSEMITIKSESKPKS--QLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQA 877 YE+ + T ++ +++E+ +KS + ++ + Q ++F+TL+++NR + + + +T AK VD+ LQL NL+YE H K I C +F+SK+ +IDLV EEF+++AP I ++++ H L RL++EL QRK L + + + +K+ + + I + P+Q L + + KQ +A LPPPLYV++ Q TA +A + + + I GS+ +A+A Sbjct: 52 YELYKYTCQELQRLMAEIQDLKSRGGKDAAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTMGDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSNMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKMLSVAIEGSVDEAKA 299
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THO5A_XENLA (THO complex subunit 5 homolog A OS=Xenopus laevis GN=thoc5-A PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.656e-28 Identity = 74/248 (29.84%), Postives = 132/248 (53.23%), Query Frame = 2 Query: 140 YEMLRDTKSSIEEIVSEMITIKSESKPKS--QLRELVTQMFINFVTLRQVNRTLLVEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQFTAQKEAFGENIDLEIVGSLKDAQA 877 Y++ +DT ++ ++SE+ +KS+ S ++ E Q ++F+TL+++NR + + + +T AK VD+ LQL NL+YE H K I C +F+SK+ +I+LV EEF+ AP I ++++ H L RL++EL QRK L + +++ K+ + + I + P+Q L + KQ +A LP PLYV++ Q +A +A + + I G++++A+A Sbjct: 47 YQLYKDTCLDLQRLMSEIQELKSKGSRDSALEIEEKKVQSCVHFMTLKKLNRLAHIRLKKARDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIELVSVEEFYSKAPVAISKPEITSTDPHQQTLSRLDWELEQRKRLAEKYKECLASKEKILKEIEIKKEYLNSLQPQLNSIMQASLPVQEYLSMPFDCMHKQYETARHLPAPLYVLFVQASAYSQACDRKLVVTIEGNVEEARA 294
BLAST of DY306215 vs. ExPASy Swiss-Prot
Match: THOC5_DROME (THO complex subunit 5 OS=Drosophila melanogaster GN=thoc5 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 3.707e-12 Identity = 63/238 (26.47%), Postives = 108/238 (45.38%), Query Frame = 2 Query: 170 IEEIVSEMITIKSESKPKSQLRELVTQMFINFVTLRQVNRTLL--VEEDRVKAETERAKAPVDSTTLQLHNLMYEKSHYVKAIKACKDFRSKYPDIDLVPEEEFHRDAPEKIKGSKLSNDISHDLMLKRLNYELHQRKELCKLHEKLEQHKKSLQEMIANRXXXXXXXXXXXXXXXXXXXPIQSQLGVLHTKKIKQLNSAELLPPPLYVIYSQF-TAQKEAFGENIDLEIVGSLKDAQ 874 +++ + + KS+ + + R T MF V L+ NR + ++ R K E+ K VD + LQL NL+YE SH K I C+ F+S+ ++L+ E E+ + P+ ++ + SH L RL+ EL RK L K + L K+ L + + P+ L + + K + LP PLYV++ + Q+ + ++ E+VG +AQ Sbjct: 12 LQKAIEGIKEAKSKGQSTDEARIATTLMF---VALKHANREVKHKIKAGRDKLHLEKCK--VDLSRLQLQNLLYEVSHLKKEIVRCQKFKSRDTSLELLSEAEYSSELPDMPNDAEELS--SHKQHLHRLDCELRLRKALDKQYSALLSSKQELLQDNLSHAQRYVSFAPALRTLQSATKPLHDALQLSLDVEWKLSAVVKYLPKPLYVLFIVLQSLQRVSEEQSFTAEVVGYESEAQ 242 The following BLAST results are available for this feature:
BLAST of DY306215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306215 ID=DY306215; Name=DY306215; organism=Citrus clementina; type=EST; length=1035bpback to top |