DY306220
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY306220 vs. ExPASy Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 7.545e-31 Identity = 77/203 (37.93%), Postives = 113/203 (55.67%), Query Frame = 1 Query: 280 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDL-DPPPN---YQPKANYRC-------NTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASIIPFLQGSKWLPCNEPGTV-PESDYVDKGGTT--D*IQFSGSENLNGVSLQLKTSGSWLSKLLNVCSE*CQAPF 846 MA+RVT +S YVA+++A SAG R G T RS E RPR H++ D+ D P + P + R +T+A EI +G C SP+++G++SLM T P + M GISPFK +S+IPFL+GSKW+PC+ P T+ + VD+GG ++ S+ ++ W++KLLN+CSE +A F Sbjct: 1 MAIRVTFTYSSYVARSIASSAGTRVG--TGDVRSCFETWVRPRFCGHNQIPDIVDKSPGSNTWGPSSGPRARPASSMYSTIAREILEEG-CKSPLVLGMISLMNLTGA---PQFSGMTGLGISPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVS------NGGNGWVNKLLNICSEDAKAAF 191 HSP 2 Score: 41.2022 bits (95), Expect = 7.545e-31 Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 2 Query: 830 DARPPFTALTVSFLFQSFLADPQILPLGLPRTPPRNVGHGNLAEKVFQTFSK 985 DA+ FTA+TVS LF+S LA+P+ +P P +VG +AEKV F K Sbjct: 186 DAKAAFTAVTVSLLFRSALAEPKSIP-STSMLPTLDVGDRVIAEKVSYFFRK 236
BLAST of DY306220 vs. ExPASy Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2) HSP 1 Score: 112.079 bits (279), Expect = 3.042e-29 Identity = 79/189 (41.80%), Postives = 107/189 (56.61%), Query Frame = 1 Query: 280 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDLDPPPNYQPKANYRCNTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASIIPFLQGSKWLPCNEPGTVPESDYVDKGGTTD*IQFSGSENLNGVSLQLKTSGSWLSKLLNVCSE*CQAPF 846 MA+R+T +S +VA+NL G R G E L RPR F H K D D P +P + Y ++A E+ G+G+ SP++MGL+S++KST G +++M V G+S FKA+SIIPFLQGSKW+ P D VDKGGT E+ NG S W++KLL+VCSE +A F Sbjct: 1 MAIRITFTYSTHVARNLV---GTRVGPGGYC----FESLVRPRFFSH--KRDFDRSPRNRPASMY--GSIARELIGEGS-QSPLVMGLISILKSTTGH---ESSTMNVLGVSSFKASSIIPFLQGSKWIK-----NPPVIDDVDKGGTVC-DDDDDKESRNGGS-------GWVNKLLSVCSEDAKAAF 161 HSP 2 Score: 38.5058 bits (88), Expect = 3.042e-29 Identity = 23/52 (44.23%), Postives = 31/52 (59.62%), Query Frame = 2 Query: 830 DARPPFTALTVSFLFQSFLADPQILPLGLPRTPPRNVGHGNLAEKVFQTFSK 985 DA+ FTA+TVS LF+S LA+P+ +P P + G +AEKV F K Sbjct: 156 DAKAAFTAVTVSILFRSALAEPKSIP-STSMYPTLDKGDRVMAEKVSYFFRK 206 The following BLAST results are available for this feature:
BLAST of DY306220 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306220 ID=DY306220; Name=DY306220; organism=Citrus clementina; type=EST; length=1320bpback to top |