DY306221
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY306221 vs. ExPASy Swiss-Prot
Match: BRXL4_ARATH (Protein Brevis radix-like 4 OS=Arabidopsis thaliana GN=BRXL4 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.680e-43 Identity = 89/170 (52.35%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 421 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTA---PGAAQSRLKSNSGESDADSD-----RF---------XXXXXXXXXXXXXXXXXXWGKEMEARLKGISKSSGEATPIKSVSGR-RVDPVVFIEKNEPKEWVAXVEP 876 MLTCIARSK+ GD+S QP+ + KSLTSQLKDMALKASGAYRHC+PCTA G Q +K+N S SD RF WGKEMEARLKGI SSGEATP KS SGR RVDP+VF+E+ EPKEWVA VEP Sbjct: 1 MLTCIARSKRAGDESSGQPDDPD---------SKNAKSLTSQLKDMALKASGAYRHCTPCTAAQGQGQGQGPIKNNPSSSSVKSDFESDQRFKMLYGRSNSSITATAAVAATQQQQPRVWGKEMEARLKGI--SSGEATP-KSASGRNRVDPIVFVEEKEPKEWVAQVEP 158 HSP 2 Score: 58.9214 bits (141), Expect = 6.680e-43 Identity = 28/42 (66.67%), Postives = 29/42 (69.05%), Query Frame = 2 Query: 875 PGVLITFVPLPPGSHDLKRIPFRPDMFKKWQAPRWWGRNPQK 1000 PGVLITFV LP G +DLKRI F DMF K QA RWW N K Sbjct: 158 PGVLITFVSLPGGGNDLKRIRFSRDMFNKLQAQRWWADNYDK 199
BLAST of DY306221 vs. ExPASy Swiss-Prot
Match: BRXL3_ARATH (Protein Brevis radix-like 3 OS=Arabidopsis thaliana GN=BRXL3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.653e-31 Identity = 68/154 (44.16%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 421 MLTCIARSKQ--PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISKSSGEATPIKSVSGRRVDPVVFIEKNEPKEWVAXVEP 876 MLTCIA +KQ + ++ E +QAIKSLTSQLKDMA+KASGAY++C PC+ G N +SDA SD WG EME+RLKGIS G T S+SG R + +VF+E +E KEWVA VEP Sbjct: 1 MLTCIACTKQLNTNNGGSTREEDEEHGVIGTPRTKQAIKSLTSQLKDMAVKASGAYKNCKPCS--GTTNRNQNRNYADSDAASDSGRFHYSYQRAGTATSTPKIWGNEMESRLKGISSEEGTPT---SMSG-RTESIVFMEDDEVKEWVAQVEP 148 HSP 2 Score: 50.0618 bits (118), Expect = 2.653e-31 Identity = 28/68 (41.18%), Postives = 32/68 (47.06%), Query Frame = 2 Query: 875 PGVLITFVPLPPGSHDLKRIPFRP--------------------------DMFKKWQAPRWWGRNPQK 1000 PGVLITFV LP G +DLKRI FR +MF KWQA +WW N +K Sbjct: 148 PGVLITFVSLPQGGNDLKRIRFRSTRFPYYRDQLLLWCRQGWVFWPQNCREMFNKWQAQKWWVENFEK 215
BLAST of DY306221 vs. ExPASy Swiss-Prot
Match: BRXL2_ARATH (Protein Brevis radix-like 2 OS=Arabidopsis thaliana GN=BRXL2 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.840e-30 Identity = 62/156 (39.74%), Postives = 81/156 (51.92%), Query Frame = 1 Query: 421 MLTCIARSKQ----PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISKSSGEATPIKSVSGRRVDPVVFIEKNEPKEWVAXVEP 876 MLTCIA +KQ G + + + + IKSLTSQ+KDMA+KASGAY+ C PC+ G++ + +SD S+ GKEME+RLKG SGE TP +S+SGR V E++E KEWVA VEP Sbjct: 1 MLTCIACTKQLNTNNGGSKKQEEDEEEEDRVIETPRSKQIKSLTSQIKDMAVKASGAYKSCKPCS--GSSNQNKNRSYADSDVASNSGRFRYAYKRAGSGSSTPKILGKEMESRLKGF--LSGEGTP-ESMSGRTESTVFMEEEDELKEWVAQVEP 151 HSP 2 Score: 60.8474 bits (146), Expect = 4.840e-30 Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 2 Query: 875 PGVLITFVPLPPGSHDLKRIPFRPDMFKKWQAPRWWGRNPQK 1000 PGVLITFV LP G +D+KRI F +MF KWQA +WW N K Sbjct: 151 PGVLITFVSLPEGGNDMKRIRFSREMFDKWQAQKWWAENFDK 192
BLAST of DY306221 vs. ExPASy Swiss-Prot
Match: BRXL1_ORYSJ (Protein Brevis radix-like 1 OS=Oryza sativa subsp. japonica GN=BRXL1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.359e-24 Identity = 57/167 (34.13%), Postives = 71/167 (42.51%), Query Frame = 1 Query: 421 MLTCIARSKQ----------PGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPC-----TAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISKSSGEATPIKSVSGRRVDPVVFIEKNEPKEWVAXVEP 876 MLTCIA SKQ DD+ +QAIK+LT+Q+KDMALKASGAYRHC PC ++P A R +D+ SDRF + AR ++ E + G D E +E KEWVA VEP Sbjct: 1 MLTCIACSKQLAGGAPPLREQSDDADDAAVARGAGECATPSTRQAIKALTAQIKDMALKASGAYRHCKPCAGSSSSSPAAGARRHHPYHAYADSGSDRFHYAYRRAGSGGDAT------PSVSARTDFLAGDEEEEEEEEEEEGTTADG---SEDDEAKEWVAQVEP 158 HSP 2 Score: 61.6178 bits (148), Expect = 4.359e-24 Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 2 Query: 875 PGVLITFVPLPPGSHDLKRIPFRPDMFKKWQAPRWWGRNPQK 1000 PGVLITF+ LP G +DLKRI F ++F KWQA RWW N +K Sbjct: 158 PGVLITFLSLPEGGNDLKRIRFSREIFNKWQAQRWWAENYEK 199
BLAST of DY306221 vs. ExPASy Swiss-Prot
Match: BRX_ARATH (Protein BREVIS RADIX OS=Arabidopsis thaliana GN=BRX PE=1 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 1.527e-20 Identity = 27/42 (64.29%), Postives = 29/42 (69.05%), Query Frame = 2 Query: 875 PGVLITFVPLPPGSHDLKRIPFRPDMFKKWQAPRWWGRNPQK 1000 PGV ITF LP G +DLKRI F +MF KWQA RWWG N K Sbjct: 147 PGVHITFASLPTGGNDLKRIRFSREMFDKWQAQRWWGENYDK 188 HSP 2 Score: 60.4622 bits (145), Expect = 1.527e-20 Identity = 49/161 (30.43%), Postives = 70/161 (43.48%), Query Frame = 1 Query: 421 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXW---------GKEMEARLKGISKSSGEATPIKSVSGRRVDPVVFIEKNEPKEWVAXVEP 876 M +CIA +K G + + ++A+KSLT Q+KDMALK SGAY+ C PCT G++ S LK S D D W +E++ I + E S+S + D V ++ + PKEW+A VEP Sbjct: 1 MFSCIACTKADGGEEVEH----GARGGTTPNTKEAVKSLTIQIKDMALKFSGAYKQCKPCT--GSSSSPLKKGH-RSFPDYDNASEGVPYPFMGGSAGSTPAWDFTNSSHHPAGRLESKFTSIYGNDRE-----SISAQSCD--VVLDDDGPKEWMAQVEP 147
BLAST of DY306221 vs. ExPASy Swiss-Prot
Match: BRXL1_ARATH (Protein Brevis radix-like 1 OS=Arabidopsis thaliana GN=BRXL1 PE=2 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 8.880e-17 Identity = 26/39 (66.67%), Postives = 29/39 (74.36%), Query Frame = 2 Query: 875 PGVLITFVPLPPGSHDLKRIPFRPDMFKKWQAPRWWGRN 991 PGV ITFV LP G +DLKRI F ++F KWQA RWWG N Sbjct: 145 PGVHITFVSLPSGGNDLKRIRFSREVFDKWQAQRWWGEN 183 HSP 2 Score: 48.521 bits (114), Expect = 8.880e-17 Identity = 42/152 (27.63%), Postives = 66/152 (43.42%), Query Frame = 1 Query: 421 MLTCIARSKQPGDDSLSQPEXXXXXXXXXXXKQQAIKSLTSQLKDMALKASGAYRHCSPCTAPGAAQSRLKSNSGESDADSDRFXXXXXXXXXXXXXXXXXXWGKEMEARLKGISKSSGEATPIKSVSGRRVDPVVFIEKNEPKEWVAXVEP 876 M TCI +K D + E ++A+KSLT+Q+KDMA K SG+++ P PG++ S L+ + D S+ ++ +S +S+S + D V +E +EPKEW+A VEP Sbjct: 1 MFTCINCTKMA--DRGEEDEEDEARGSTTPNTKEAVKSLTTQIKDMASKFSGSHKQSKP--TPGSSSSNLRKFP-DFDTASESVPYPYPGGSTSSTPAWDLPRSSYHQSGRPDSRFTSMYGGERESISAQSCD--VVLEDDEPKEWMAQVEP 145 The following BLAST results are available for this feature:
BLAST of DY306221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306221 ID=DY306221; Name=DY306221; organism=Citrus clementina; type=EST; length=1002bpback to top |