DY306864

Overview
NameDY306864
Unique NameDY306864
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1238
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY306864 vs. ExPASy Swiss-Prot
Match: MYG1_HUMAN (UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 1.780e-59
Identity = 131/319 (41.07%), Postives = 176/319 (55.17%), Query Frame = 1
Query:  148 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSR------------------DPK------------------------------------HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRSLRDDELSKEAGIPGGVFVHMSCFIGGNQGYGGAL 939
            R+GTHNG+FHCDEAL C ++RL  ++ +A+IVR+R                  DP+                                    HFG +L+A+ L   E    V  L+  +Y+NF+E +DA+DNGI+Q+  +  PRY   T LS+RV +LN  W  PDQ  E     F++ MDL  +EFL  + FY  SWLPAR++V E +A+R+  DPSGEI+ L K  CPWK HL+ LE  +     I +V+Y D  G QWR+Q V   P  F+SR PLP  WR LRD+ L + +GIPG +FVH S FIGG+    GAL
Sbjct:   46 RIGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGPSEEDSMVGTLYDKMYENFVEEVDAVDNGISQW-AEGEPRYALTTTLSARVARLNPTWNHPDQDTEA---GFKRAMDLVQEEFLQRLDFYQHSWLPARALVEEALAQRFQVDPSGEIVELAKGACPWKEHLYHLESGLSPPVAIFFVIYTDQAG-QWRIQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHPTREGAL 359          
BLAST of DY306864 vs. ExPASy Swiss-Prot
Match: MYG1_BOVIN (UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 2.570e-58
Identity = 129/319 (40.44%), Postives = 180/319 (56.43%), Query Frame = 1
Query:  148 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSR------------------DPK------------------------------------HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRF-CPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRSLRDDELSKEAGIPGGVFVHMSCFIGGNQGYGGAL 939
            R+GTHNG+FHCDEAL C ++RL  ++  A+IVR+R                  DP+                                    HFG +L+A+ L   E    V  L+  +Y+NF+E +DA+DNGI+Q++  +P RY+  T LS+RV +LN  W +P+Q  E     F++ MDL  +EFL  + FY  SWLPAR++V E +A+R+  DPSGEI+ L++  CPWK HL++LE  +     I +V+Y D  G QWRVQ V   P  F+SR PL   WR LRD+ L + +GIPG +FVH S FIGG++   GAL
Sbjct:   46 RIGTHNGTFHCDEALACALLRLLPEYREAEIVRTRDPEKLAACDIVVDVGGEYDPQRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDGMVGTLYDKMYENFVEEVDAVDNGISQWEEGEP-RYLLTTTLSARVARLNPTWNQPNQDTEA---GFKRAMDLVREEFLQRLDFYQNSWLPARTLVEEALAKRFQVDPSGEIIELEKGGCPWKEHLYQLELGLSPAGTIAFVIYTDQAG-QWRVQCVPKEPHSFQSRLPLLEPWRGLRDEALDQISGIPGCIFVHASGFIGGHRTREGAL 359          
BLAST of DY306864 vs. ExPASy Swiss-Prot
Match: U160_DICDI (UPF0160 protein OS=Dictyostelium discoideum GN=DDB_G0267768 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 3.711e-57
Identity = 122/325 (37.54%), Postives = 182/325 (56.00%), Query Frame = 1
Query:  157 THNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDP-------------------------------------------------KHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRSLRDDELSKEAGIPGGVFVHMSCFIGGNQGYGGALXHGSRLLEALNSTKK 984
            TH+GSFH DEAL C++++L   + +++I+RSRD                                                  KH+GK++I + L+ ++   ++  L+  +Y + ++ +D +DNG+ +Y +D  PRY + +++S+RVG LN  W EP Q  E  N+ F++ M+L G+ FLD + +Y +SWLP RSIV   +  R     SGEI++L  FCPWK HLF LE+E  I+  IK+VL+ED  G QWRV AV ++   F  R PLP +WR  RD+ELS+ +GI G VF H + FIGGN+   GAL      ++ LN + K
Sbjct:    8 THSGSFHADEALACYLLKLLPTYKDSKIIRSRDKSVIEKSTVAVDVGAVYNFEKLRFDHHQSGFTETFDDKHDIKLSSAGLIYKHYGKDIIKQRLDTNDSITEL--LYQKLYDSMIQELDGVDNGVERYPSDIKPRYQSGSSISARVGHLNQGWNEP-QDDEIVNKQFEKAMELMGQYFLDRLDYYGKSWLPCRSIVENALENRKQTHSSGEILILDMFCPWKDHLFSLEQEKDIKTPIKFVLFEDTSG-QWRVSAVGINLHSFTLRLPLPEEWRGKRDEELSQISGIEGCVFAHANGFIGGNKTREGALL---MAIKTLNQSPK 325          
BLAST of DY306864 vs. ExPASy Swiss-Prot
Match: MYG1_RAT (UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.613e-52
Identity = 108/227 (47.58%), Postives = 144/227 (63.44%), Query Frame = 1
Query:  262 HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRSLRDDELSKEAGIPGGVFVHMSCFIGGNQGYGGAL 939
            HFG +L+A+ L   E    V  ++  +Y+NF+E +DA+DNGI+Q+  +  PRY   T LS+RV +LN  W +PDQ  E     F++ MDL  +EFL  + FY  SWLPAR++V E +A+R+  D SGEI+ L K  CPWK HL+ LE E+     I +V+Y D  G QWRVQ V   P  F+SR PLP  WR LRD+ L + +GIPG +FVH S FIGG+    GAL
Sbjct:  138 HFGHKLLAQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYALTTTLSARVSRLNPTWNQPDQDTEA---GFRRAMDLVQEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKEHLYHLESELSPTVAITFVIYTDQAG-QWRVQCVPKEPHSFQSRLPLPEPWRGLRDEALDQVSGIPGCIFVHASGFIGGHHTREGAL 359          
BLAST of DY306864 vs. ExPASy Swiss-Prot
Match: YIW4_SCHPO (UPF0160 protein C694.04c OS=Schizosaccharomyces pombe GN=SPAC694.04c PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.752e-52
Identity = 120/325 (36.92%), Postives = 168/325 (51.69%), Query Frame = 1
Query:  142 LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDP------------------------------------------------KHFGKELI---AKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRSLRDDELSKEAGIPGGVFVHMSCFIGGNQGYGGALXHGSRLLE 963
            L ++ TH+G+FH DEAL  +M+R  D+F  AQIVRSRDP                                                KHFG+E+I     +L ++E   D+  L+  VY++F+E +DA DNGI+ Y     P +    +L   V      W    Q  +   E FQ+  DL G  F+ +V  Y  SWLPA+++  E I +  D      I+++ +F PWK HLF++E+E+ IE   KY +Y D  GK WRVQAV++ P  F  R PLP  WR +RD++LS+  GIPG +FVH S FIGGNQ + GAL    + L+
Sbjct:    4 LVKIATHSGTFHADEALAVYMLRRLDRFSGAQIVRSRDPQVLDSCDIIVDVGGKYDGIKYFDHHQREFNDTFSPKYSTRLSSAGLIYKHFGREVIHAVLPQLKINE--QDLETLYEKVYQSFVEGLDANDNGISAYPAGLKPSFKAAMSLPEMVSSFLPAWNSEKQDDQTYLECFQKASDLMGTWFVRSVEHYALSWLPAKTLAREAILKAKD----SPILIVDQFFPWKGHLFDIEKELGIENQFKYAIYSD--GKAWRVQAVSIDPTSFTCRLPLPEPWRGIRDEKLSELTGIPGCIFVHASGFIGGNQTFEGALEMARKALD 320          
BLAST of DY306864 vs. ExPASy Swiss-Prot
Match: MYG1_MOUSE (UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 2.752e-52
Identity = 107/227 (47.14%), Postives = 145/227 (63.88%), Query Frame = 1
Query:  262 HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVL-KRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRSLRDDELSKEAGIPGGVFVHMSCFIGGNQGYGGAL 939
            HFG++L+A+ L   E    V  ++  +Y+NF+E +DA+DNGI+Q+  +  PRY   T LS+RV +LN  W +P+Q  E     F++ MDL  +EFL  + FY  SWLPAR++V E +A+R+  D SGEI+ L K  CPWK HL+ LE E+  +  I +V+Y D  G QWRVQ V   P  F+SR PLP  WR LRD  L + +GIPG +FVH S FIGG+    GAL
Sbjct:  137 HFGRKLLAQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYAMTTTLSARVARLNPTWNQPNQDTEA---GFRRAMDLVQEEFLQRLNFYQHSWLPARALVEEALAQRFKVDSSGEIVELAKGGCPWKEHLYHLESELSPKVAITFVIYTDQAG-QWRVQCVPKEPHSFQSRLPLPEPWRGLRDKALDQVSGIPGCIFVHASGFIGGHHTREGAL 358          
BLAST of DY306864 vs. ExPASy Swiss-Prot
Match: YK4P_CAEEL (UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 8.007e-52
Identity = 111/248 (44.76%), Postives = 153/248 (61.69%), Query Frame = 1
Query:  262 HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRF-CPWKLHLFELEEEMKI-EPLIKYVLYEDDRGKQWRVQAVAVSP-DRFESRKPLPAQWRSLRDDELSKEAGIPGGVFVHMSCFIGGNQGYGGALXHGSRLLE--ALNSTKKEK 990
            H+G+E+I + L  +     +   +  +Y+ F+E+IDAIDNGI+QYD    PRY ++ NLSSR G+ N  W EP+  A+   E FQQ M   G+EF  +V++    W PAR I+   + +R++ D SG I++++   CPWK H F++E E  I +  I Y+L+ D     WRVQA+ V     FE+R PLPA WR LRDD+LSKE+GIPGGVFVH+S FIGGN    GA+    + LE    N  KK K
Sbjct:   95 HYGREVINQILGGNVSSSMIDLFYHRLYEQFVESIDAIDNGISQYDG--VPRYHSSGNLSSRTGQFNSHWNEPENDAD---ERFQQAMQFIGEEFSRSVKYLANVWWPAREIIEAAVDKRFEIDASGRIILIENGGCPWKEHFFDIEVEKNIADDNITYILFSDSTNASWRVQAIPVDKMSSFENRMPLPAAWRGLRDDDLSKESGIPGGVFVHISGFIGGNLTREGAIAMARKALEIGEENPVKKAK 337          
BLAST of DY306864 vs. ExPASy Swiss-Prot
Match: YEY6_YEAST (UPF0160 protein YER156C OS=Saccharomyces cerevisiae GN=YER156C PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.510e-50
Identity = 114/310 (36.77%), Postives = 171/310 (55.16%), Query Frame = 1
Query:  145 KRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPK------------------------------------------------HFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQY----DTDKPPRYVNNT-NLSSRVGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFLDTVRFYVRSWLPARSIVVECIAERYDYDPSGEIMVLKRFCPWKLHLFELEEEMKIEPLIKYVLYEDDRGKQWRVQAVAVSPDRFESRKPLPAQWRSLRDDELSKEAGIPGGVFVHMSCFIGG 915
            K++ TH+GSFH DE+L  +M+RL  +F +A++VRSR+PK                                                H+G+++I   LN      D+  L+  VYK F+EA+DA DNGI++Y    D++  P + +N  ++   +  +N +W E D S E  +  F +  +  G  F+  VR Y +SWLPA+++V + I ER D D SG+I+VL +FCPWK HL+ELE E  IE  I++VL+ D  G  WRV  V ++   F+ R+ LP   R LRD+ELS ++G+PG +F+H + FIGG
Sbjct:   15 KQICTHSGSFHADESLAVYMLRLLPEFKDAKLVRSRNPKDWEASDILVDVGAQYDGVKFFDHHQRGFFETFNEKYKTKLSSAGLIFKHYGRDIIKTILNNKVSSSDLDLLYDKVYKQFVEALDANDNGISKYTIPKDSNLEPNFRDNAISIPGIISGMNPNWNE-DTSDESFDRCFARASEFIGGVFVTLVRGYGQSWLPAKALVAQAIDERMDVDKSGKIIVLPQFCPWKEHLYELEREKNIEKQIEFVLFTDSSG-AWRVSTVPINSTSFQFRRGLPEPLRGLRDEELSTKSGVPGCIFIHAAGFIGG 322          
The following BLAST results are available for this feature:
BLAST of DY306864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
MYG1_HUMAN1.780e-5941.07UPF0160 protein MYG1, mitochondrial OS=Homo sapien... [more]
MYG1_BOVIN2.570e-5840.44UPF0160 protein MYG1, mitochondrial OS=Bos taurus ... [more]
U160_DICDI3.711e-5737.54UPF0160 protein OS=Dictyostelium discoideum GN=DDB... [more]
MYG1_RAT1.613e-5247.58UPF0160 protein MYG1, mitochondrial OS=Rattus norv... [more]
YIW4_SCHPO2.752e-5236.92UPF0160 protein C694.04c OS=Schizosaccharomyces po... [more]
MYG1_MOUSE2.752e-5247.14UPF0160 protein MYG1, mitochondrial OS=Mus musculu... [more]
YK4P_CAEEL8.007e-5244.76UPF0160 protein C27H6.8 OS=Caenorhabditis elegans ... [more]
YEY6_YEAST1.510e-5036.77UPF0160 protein YER156C OS=Saccharomyces cerevisia... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH1DC12RM2 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY306864 ID=DY306864; Name=DY306864; organism=Citrus clementina; type=EST; length=1238bp
GGCGCAACCAAAGGGTTTAACCAGAAACTCTTCTTCTTCAGCGTGCACAA
AAACCTCTTCACTCGCCCTATCATAGCCATGGCAGGCACCGGTGTTTCTT
CTTCTCCTGCTTACTCCACTTCATCCCCCAGCCAAGCCCCTCTCAAGCGC
GTGGGCACCCACAACGGCAGCTTCCACTGCGACGAGGCCCTTGGTTGCTT
CATGATTCGCCTCACTGACAAGTTCTTCAACGCCCAGATAGTCCGCTCCC
GCGACCCCAAGCATTTTGGAAAGGAGTTAATAGCTAAGGAACTTAATGTT
GATGAAGGGCATCCAGACGTGCATCGACTATTTTTGGCTGTTTATAAGAA
CTTCATGGAGGCAATCGATGCTATTGATAACGGAATCAATCAGTATGACA
CAGACAAACCTCCAAGATATGTGAATAATACAAATTTGTCTTCTAGGGTG
GGGAAACTAAATTTGGATTGGACGGAACCTGATCAGTCAGCGGAGAGGGA
GAATGAAGCCTTCCAACAAGGAATGGATCTGGCTGGCAAAGAGTTTCTGG
ACACTGTTCGATTTTATGTGAGATCATGGTTACCAGCACGATCAATTGTA
GTGGAATGTATTGCAGAAAGATATGATTATGATCCAAGTGGTGAAATTAT
GGTTTTGAAAAGATTTTGTCCTTGGAAGCTTCACTTGTTTGAGCTTGAGG
AGGAGATGAAGATTGAGCCTCTTATTAAATATGTTCTTTACGAGGACGAC
AGGGGCAAACAATGGCGGGTGCAGGCTGTGGCAGTGTCCCCCGATAGATT
CGAGAGCCGGAAGCCTCTTCCAGCTCAATGGCGAAGTCTGAGAGATGATG
AACTCTCAAAGGAGGCGGGGATACCAGGTGGTGTCTTTGTCCATATGAGT
TGTTTCATTGGTGGAAATCAAGGTTATGGAGGTGCATTGGNCCATGGCTC
GCGCTTGCTTGAAGCTCTAAACAGCACAAAAAAAGAAAAAAATTCCATTT
ACCGAATTTTATAACCTATTTCCAATTTTCCATTTCAAAAAATTTTTCAA
GTTTTTTGCCCGCAATTTTTGGGGCTTTTTTTTCAAAAAAAACAAAATTT
CCAAAACAAATAATTCTTTTCTTTTCCCCCTAAAAATTTTTTTTGTTTAA
AAAAAAAACCACCTCTATAATGGTGTGATAAAATTTTTTTTTTTGTGGGG
AAAACAAAAAAATCTTTTAAATTTTTTTTTTTATTTTA
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