EH406165

Overview
NameEH406165
Unique NameEH406165
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length443
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9921 contig Ccv1_Contig9921:4..446. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406165 vs. ExPASy Swiss-Prot
Match: GLIP1_ARATH (GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=GLIP1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.119e-25
Identity = 52/86 (60.47%), Postives = 67/86 (77.91%), Query Frame = 2
Query:    2 RFNNPSKYGFKE-VTACCGSGPYGGLSSCGGKRAIKE-YELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFE 253
            R N+PSKYGFKE   ACCGSGP  G+++CGG+  + + YELC+N  +YLFFD  H +EKA +QIAEL+W+G  ++TGPYNLK LFE
Sbjct:  287 RMNDPSKYGFKEGKKACCGSGPLRGINTCGGRMGLSQSYELCENVTDYLFFDPFHLTEKANRQIAELIWSGPTNITGPYNLKALFE 372          
BLAST of EH406165 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.614e-25
Identity = 53/86 (61.63%), Postives = 67/86 (77.91%), Query Frame = 2
Query:    2 RFNNPSKYGFKE-VTACCGSGPYGGLSSCGGKRAIKE-YELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFE 253
            R N+PSKYGFKE   ACCGSGP  G+++CG +    + Y LC+N  +YLF+DSSH +EKA++QIAEL+WNG P+VT PYNLK LFE
Sbjct:  278 RINSPSKYGFKEGKKACCGSGPLRGINTCGNRIGPSQGYGLCENVTDYLFYDSSHLTEKAHRQIAELIWNGPPNVTRPYNLKALFE 363          
BLAST of EH406165 vs. ExPASy Swiss-Prot
Match: GLIP2_ARATH (GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=GLIP2 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.996e-24
Identity = 50/86 (58.14%), Postives = 66/86 (76.74%), Query Frame = 2
Query:    2 RFNNPSKYGFKE-VTACCGSGPYGGLSSCGGKRAIKE-YELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLFE 253
            R NNPSKYGFKE   ACCG+GP  G+++CGG+  + + YELC+   +YLFFD  H +EKA++QIAEL+W+G  +VT PYNL+ LFE
Sbjct:  289 RMNNPSKYGFKEGKMACCGTGPLRGINTCGGRMGVSQSYELCEKVTDYLFFDHFHLTEKAHQQIAELIWSGPTNVTKPYNLQALFE 374          
BLAST of EH406165 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23
Identity = 49/85 (57.65%), Postives = 66/85 (77.65%), Query Frame = 2
Query:    2 RFNNPSKYGFKE-VTACCGSGPYGGLSSCGGKRAIKE-YELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKMLF 250
            R NNPS+YGFKE   ACCGSGP  G+++CG +    + Y+LC+N ++Y+FFD SH +E A++QIAEL+W+G P+VT PYNLK LF
Sbjct:  291 RINNPSRYGFKEGEMACCGSGPLRGINTCGFRNGPSQGYKLCENADDYVFFDPSHLTETAHQQIAELIWSGPPNVTAPYNLKTLF 375          
BLAST of EH406165 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 6.380e-22
Identity = 46/89 (51.69%), Postives = 62/89 (69.66%), Query Frame = 2
Query:    2 RFNNPSKYGFKE-VTACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNG----TPDVTGPYNLKMLFE 253
            R  +PSK+GFKE   ACCG+G + G+ SCGGKR +KEY+LC+NP +Y+F+DS H ++  Y Q A L+WNG       V GPYN+  LF+
Sbjct:  295 RMQHPSKFGFKEGEEACCGTGKWRGVFSCGGKRIVKEYQLCENPKDYIFWDSLHLTQNTYNQFANLIWNGGHMSDSLVVGPYNINNLFQ 383          
BLAST of EH406165 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.683e-14
Identity = 34/79 (43.04%), Postives = 53/79 (67.09%), Query Frame = 2
Query:   14 PSKYGFKEVT-ACCGSGPYGGLSSCGGKRAIKEYELCDNPNEYLFFDSSHSSEKAYKQIAELMWNGTPDVTGPYNLKML 247
            P++YGF +V+ ACCG+G  GGL  CG +     Y++C+NPNE+LF+D  H +E  Y+ +++ +WNG  +   P+NL  L
Sbjct:  281 PARYGFSDVSNACCGNGTLGGLMQCGREG----YKICNNPNEFLFWDFYHPTEHTYRLMSKALWNGNKNHIRPFNLMAL 355          
The following BLAST results are available for this feature:
BLAST of EH406165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
GLIP1_ARATH2.119e-2560.47GDSL esterase/lipase 1 OS=Arabidopsis thaliana GN=... [more]
GLIP3_ARATH3.614e-2561.63GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=... [more]
GLIP2_ARATH3.996e-2458.14GDSL esterase/lipase 2 OS=Arabidopsis thaliana GN=... [more]
GRIP4_ARATH1.163e-2357.65GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GLIP5_ARATH6.380e-2251.69GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
GLIP6_ARATH1.683e-1443.04GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAB1AH09ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406165 ID=EH406165; Name=EH406165; organism=Citrus clementina; type=EST; length=443bp
GAGGTTCAACAATCCTTCAAAATATGGTTTTAAGGAAGTCACTGCTTGCT
GTGGCAGCGGTCCATATGGAGGACTGTCAAGCTGTGGGGGTAAGAGAGCA
ATAAAAGAATATGAATTATGTGACAATCCAAACGAATATTTGTTCTTTGA
CTCATCTCATTCCTCTGAAAAGGCCTACAAGCAAATTGCAGAATTAATGT
GGAATGGAACTCCAGATGTCACAGGGCCATACAATTTGAAGATGCTATTT
GAGCACAGCACCTGTATATAGCTAGTGCATATCCGTAATGGATTTTGTTT
GTGTGATTGCCAAGAGATTAAGATGTGGATATGTTCAATCTCCTTCATTG
ATCAAATTTATATTAGTAAACAAGCATCTTGCTAGATTTAATATTGATTC
TTTGTCAAACAAGTTATCTTTTGTGAAGTTAATTTTAGAGATC
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