EH406314

Overview
NameEH406314
Unique NameEH406314
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length761
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig135 contig Ccv1_Contig135:392..1152. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLC1_SOLTU (Plastidic ATP/ADP-transporter OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.530e-64
Identity = 130/168 (77.38%), Postives = 140/168 (83.33%), Query Frame = 1
Query:    4 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRAAVKIPVVSENEGGNGTLPGGSALNAAG----ETPSEASSPRNI 495
            LAKFGMTPL+AAVYVGAMQNIFSK AKYS FDP KEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLA+STPYLGG+LLVIVLAWLGAA+SLD QFT LRQ         RA++KIPVVS+NE GNG L   S+LN AG       SE SSPR++
Sbjct:  464 LAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLASSTPYLGGVLLVIVLAWLGAAKSLDGQFTQLRQEEDLEKEMERASLKIPVVSQNENGNGPLSSESSLNPAGGDSTNASSEPSSPRSL 631          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLC1_ARATH (ADP,ATP carrier protein 1, chloroplastic OS=Arabidopsis thaliana GN=AATP1 PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.696e-55
Identity = 119/168 (70.83%), Postives = 133/168 (79.17%), Query Frame = 1
Query:    4 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRA-AVKIPVVSENEGGNGTLPGGSALNAAGETPS---EASSPRNI 495
            +AK GMTPL+AAVYVGA+QNIFSK AKYS FDP KEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMIL+FGSLANSTPYLG ILLVIV AWL AA+SL+ QF +LR          RA +VKIPVVS++E GNG+L         GE+PS   E S+P N+
Sbjct:  466 VAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILSFGSLANSTPYLGMILLVIVTAWLAAAKSLEGQFNSLRSEEELEKEMERASSVKIPVVSQDESGNGSL---------GESPSSSPEKSAPTNL 624          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLC2_ARATH (ADP,ATP carrier protein 2, chloroplastic OS=Arabidopsis thaliana GN=AATP2 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 2.145e-50
Identity = 106/141 (75.18%), Postives = 115/141 (81.56%), Query Frame = 1
Query:    4 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTALRQXXXXXXXXXRA-AVKIPVVSENEGGNG 423
            +AK GMTPL+AAVYVGA+QNIFSK AKYS FDP KEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLG ILL IV AWL AA+SL+ QF  L           RA +VKIPVVS+ +  +G
Sbjct:  463 VAKLGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGVILLGIVTAWLAAAKSLEGQFNTLMSEEELEREMERASSVKIPVVSQEDAPSG 603          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLC1_CHLPN (ADP,ATP carrier protein 1 OS=Chlamydia pneumoniae GN=tlcA PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.142e-28
Identity = 66/111 (59.46%), Postives = 79/111 (71.17%), Query Frame = 1
Query:    4 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 336
            +A FG TPL+ AV VGA+QNI SK  KY+ FD  KEMAYIPLD++ KVKGKAAIDVV    GKSGGALIQQ +++  GS+   TPYL  ILL I+  WL +A  L+  F A
Sbjct:  386 VAMFGTTPLMLAVVVGAIQNILSKSTKYALFDSTKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGALIQQGLLVICGSIGAMTPYLAVILLFIIAIWLVSATKLNKLFLA 496          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLC1_CHLMU (ADP,ATP carrier protein 1 OS=Chlamydia muridarum GN=tlcA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.160e-26
Identity = 61/111 (54.95%), Postives = 78/111 (70.27%), Query Frame = 1
Query:    4 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 336
            +A  G TPL+ AV VGA+QNI SK  KY+ FD  KEMAYIPLD++ KVKGKAAIDVV    GKSGG+LIQQ +++  GS++  TP+L   L  I++ WL +A  L+  F A
Sbjct:  384 VAALGTTPLMLAVVVGAVQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQGLLVVCGSISAMTPFLAVALFAIIMVWLTSATKLNKLFLA 494          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLC1_CHLTR (ADP,ATP carrier protein 1 OS=Chlamydia trachomatis GN=tlcA PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.822e-26
Identity = 61/111 (54.95%), Postives = 77/111 (69.37%), Query Frame = 1
Query:    4 LAKFGMTPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTA 336
            +A  G TPL+ AV VGA+QNI SK  KY+ FD  KEMAYIPLD++ KVKGKAAIDVV    GKSGG+LIQQ +++  GS+   TP+L   L  I++ WL +A  L+  F A
Sbjct:  384 VAALGTTPLMLAVVVGAIQNILSKSTKYALFDATKEMAYIPLDQEQKVKGKAAIDVVAARFGKSGGSLIQQGLLVVCGSIGAMTPFLAVALFAIIMVWLTSATKLNKLFLA 494          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLCA_RICBR (ADP,ATP carrier protein 1 OS=Rickettsia bellii (strain RML369-C) GN=tlcA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.088e-21
Identity = 50/107 (46.73%), Postives = 69/107 (64.49%), Query Frame = 1
Query:   25 PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSL--ANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 339
            PL  AV +G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +L    +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  386 PLALAVMIGTIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFIIFPALGFVEATPYFASIFFVIVILWIYAVKGLNKEYQVL 492          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLCA_RICPR (ADP,ATP carrier protein 1 OS=Rickettsia prowazekii GN=tlcA PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.039e-20
Identity = 49/108 (45.37%), Postives = 70/108 (64.81%), Query Frame = 1
Query:   22 TPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQ--FMILTFGSLANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 339
            +PL  AV +G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+   LGKSGGA+IQ   F++        +TPY   I  +IV+ W+ A + L+ ++  L
Sbjct:  385 SPLTLAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPVFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVL 492          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLCA_RICTY (ADP,ATP carrier protein 1 OS=Rickettsia typhi GN=tlcA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.314e-20
Identity = 49/108 (45.37%), Postives = 69/108 (63.89%), Query Frame = 1
Query:   22 TPLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLA--NSTPYLGGILLVIVLAWLGAARSLDTQFTAL 339
            +PL  AV  G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+   LGKSGGA+IQ    + F +     +TPY   I  +IV+ W+ A + L+ ++  L
Sbjct:  385 SPLTLAVMFGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRLGKSGGAIIQSTFFILFPAFGFIEATPYFASIFFIIVILWIFAVKGLNKEYQVL 492          
BLAST of EH406314 vs. ExPASy Swiss-Prot
Match: TLCA_RICFE (ADP,ATP carrier protein 1 OS=Rickettsia felis GN=tlcA PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.314e-20
Identity = 49/107 (45.79%), Postives = 68/107 (63.55%), Query Frame = 1
Query:   25 PLIAAVYVGAMQNIFSKCAKYS*FDPRKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGS--LANSTPYLGGILLVIVLAWLGAARSLDTQFTAL 339
            PL  AV +G +QN+ SK  KYS FD  K MAYIPLD+D +VKG+AA++V+    GKSGGA+IQ    + F +     +TPY   I  VIV+ W+ A + L+ ++  L
Sbjct:  386 PLALAVMIGMIQNVLSKGVKYSLFDATKNMAYIPLDKDLRVKGQAAVEVIGGRFGKSGGAIIQSTFFILFPAFGFVEATPYFASIFFVIVILWIYAVKGLNKEYQVL 492          
The following BLAST results are available for this feature:
BLAST of EH406314 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
TLC1_SOLTU1.530e-6477.38Plastidic ATP/ADP-transporter OS=Solanum tuberosum... [more]
TLC1_ARATH1.696e-5570.83ADP,ATP carrier protein 1, chloroplastic OS=Arabid... [more]
TLC2_ARATH2.145e-5075.18ADP,ATP carrier protein 2, chloroplastic OS=Arabid... [more]
TLC1_CHLPN5.142e-2859.46ADP,ATP carrier protein 1 OS=Chlamydia pneumoniae ... [more]
TLC1_CHLMU2.160e-2654.95ADP,ATP carrier protein 1 OS=Chlamydia muridarum G... [more]
TLC1_CHLTR2.822e-2654.95ADP,ATP carrier protein 1 OS=Chlamydia trachomatis... [more]
TLCA_RICBR6.088e-2146.73ADP,ATP carrier protein 1 OS=Rickettsia bellii (st... [more]
TLCA_RICPR1.039e-2045.37ADP,ATP carrier protein 1 OS=Rickettsia prowazekii... [more]
TLCA_RICTY2.314e-2045.37ADP,ATP carrier protein 1 OS=Rickettsia typhi GN=t... [more]
TLCA_RICFE2.314e-2045.79ADP,ATP carrier protein 1 OS=Rickettsia felis GN=t... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3AG11ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406314 ID=EH406314; Name=EH406314; organism=Citrus clementina; type=EST; length=761bp
GCTCTTGCGAAGTTCGGAATGACTCCTCTTATTGCTGCTGTATATGTGGG
TGCCATGCAAAATATTTTCAGTAAGTGTGCCAAGTACAGCTAGTTTGATC
CTCGCAAAGAAATGGCCTACATTCCATTAGATGAAGACACCAAGGTTAAA
GGGAAGGCAGCCATCGATGTTGTGTGCAACCCGTTGGGGAAATCTGGAGG
TGCTCTTATTCAGCAGTTTATGATATTAACCTTTGGGTCCCTTGCGAATT
CAACTCCTTATCTTGGAGGGATACTTTTGGTGATTGTTCTTGCATGGTTA
GGAGCAGCCAGGTCTTTAGATACCCAATTTACAGCTTTGCGTCAGGAAGA
AGAGCTTGAGAAGGAGATGGAAAGAGCTGCTGTTAAGATCCCAGTTGTCT
CTGAAAATGAAGGCGGGAATGGTACTCTTCCAGGTGGATCAGCTTTGAAT
GCAGCAGGTGAGACACCCAGTGAAGCATCTAGTCCACGCAATATCTGAAA
TAGTTTCTTCCAATTCCTTGCCGCATGAAGAATGAGAAGCATCAATACTT
GAGGTATTGCTTGTAGGATCTTCTCAAATTACACAAATAATAGTAGCTAA
ACAAAGTATGAGCCCGTCTGTCTTAATTCCGCCTTTTTCCCGTAGATAAT
GAGTTTAGTATCTGTTTACTCATACATTCATGTTCTTTGTAGAATTCGAA
TTTGGTTTTTTATTGATAGCAACAACATTAAATTTAATAATTTCTTGATT
ATATCTTAGTC
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