EH406338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RK11_SPIOL (50S ribosomal protein L11, chloroplastic OS=Spinacia oleracea GN=rpl11 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.571e-26 Identity = 57/68 (83.82%), Postives = 63/68 (92.65%), Query Frame = 1 Query: 19 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDIDPPVLETKKKEL 222 G EKGSKDP+ +KVGKITI+QLR IATEKLPDLNCT+IESAMRIIAGTAANMGIDIDPP+L KKKE+ Sbjct: 155 GAEKGSKDPQMEKVGKITIDQLRGIATEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILVKKKKEV 222
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RK11_ARATH (50S ribosomal protein L11, chloroplastic OS=Arabidopsis thaliana GN=RPL11 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.330e-25 Identity = 57/66 (86.36%), Postives = 61/66 (92.42%), Query Frame = 1 Query: 19 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDIDPPVLETKKK 216 GVEKGSKDP+Q KVG ITI+QLR IA EKLPDLNCT+IESAMRIIAGTAANMGIDIDPP+LE KKK Sbjct: 153 GVEKGSKDPQQDKVGVITIDQLRTIAAEKLPDLNCTTIESAMRIIAGTAANMGIDIDPPILEPKKK 218
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RL11_THERP (50S ribosomal protein L11 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rplK PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 33/56 (58.93%), Postives = 46/56 (82.14%), Query Frame = 1 Query: 19 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 186 G+EKG+ DPK+QKVG++T EQ+R IA K+PDLN +E+AMR+I GTA +MGI++ Sbjct: 84 GIEKGAADPKRQKVGRVTREQIREIAQLKMPDLNARDLEAAMRMIEGTARSMGIEV 139
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RL11_PERMH (50S ribosomal protein L11 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=rplK PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 34/57 (59.65%), Postives = 47/57 (82.46%), Query Frame = 1 Query: 19 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 189 G++KG+ DPK++KVGK+T EQ+R IA K+ DLN IE+AMRIIAGTA +MGI+++ Sbjct: 85 GIKKGASDPKREKVGKVTKEQIREIAEIKMKDLNTEDIEAAMRIIAGTARSMGIEVE 141
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RL11_CYAP4 (50S ribosomal protein L11 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplK PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.569e-13 Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 19 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 186 G+E+GS +P ++KVGKIT QLR IA KLPDLN +++AMRI+AGTA NMG+ I Sbjct: 84 GIERGSGEPNKKKVGKITTAQLREIAQTKLPDLNANDVDAAMRIVAGTARNMGVTI 139
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RL11B_BACHD (50S ribosomal protein L11-2 OS=Bacillus halodurans GN=rplK2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.885e-13 Identity = 37/57 (64.91%), Postives = 45/57 (78.95%), Query Frame = 1 Query: 19 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDID 189 GVEKG+ P ++ VG IT +QLR IA KLPDLN TSI+ AM+IIAGTA NMGI+I+ Sbjct: 83 GVEKGAAQPGKEVVGSITTQQLRTIAEIKLPDLNTTSIDRAMKIIAGTARNMGINIE 139
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RL11_THEEB (50S ribosomal protein L11 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplK PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12 Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 1 Query: 19 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 186 G+EKGS +P ++KVG IT QLR IA +K+PDLN IE+AMRII GTA NMG+ I Sbjct: 84 GIEKGSGEPNKKKVGSITRAQLREIAEKKMPDLNANDIEAAMRIIEGTARNMGVTI 139
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RL11_GEOSL (50S ribosomal protein L11 OS=Geobacter sulfurreducens GN=rplK PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12 Identity = 32/57 (56.14%), Postives = 45/57 (78.95%), Query Frame = 1 Query: 16 IGVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 186 +G+E GS P + KVGK+T EQ+R IAT+KLPD+N S+E+AMR + GTA +MG++I Sbjct: 83 VGIESGSSVPNKNKVGKLTREQVREIATKKLPDMNAASLEAAMRTVEGTARSMGVEI 139
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RL11_BDEBA (50S ribosomal protein L11 OS=Bdellovibrio bacteriovorus GN=rplK PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.202e-12 Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 1 Query: 22 VEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 186 +E GSK P++ KVGKI +Q++ IAT KLPDLNC +ESAM +AGTA +MGIDI Sbjct: 85 LESGSKQPQKDKVGKINNDQIKQIATTKLPDLNCLKVESAMSQVAGTAKSMGIDI 139
BLAST of EH406338 vs. ExPASy Swiss-Prot
Match: RL11_THEPX (50S ribosomal protein L11 OS=Thermoanaerobacter sp. (strain X514) GN=rplK PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.876e-12 Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = 1 Query: 19 GVEKGSKDPKQQKVGKITIEQLRAIATEKLPDLNCTSIESAMRIIAGTAANMGIDI 186 G+E GS P +QKVGKIT EQLR IA K+ DLN + IE+AMR+IAGTA +MGI+I Sbjct: 84 GIESGSPQPNKQKVGKITREQLREIAEIKMKDLNASDIEAAMRMIAGTARSMGIEI 139 The following BLAST results are available for this feature:
BLAST of EH406338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >EH406338 ID=EH406338; Name=EH406338; organism=Citrus clementina; type=EST; length=739bpback to top |