EH406349

Overview
NameEH406349
Unique NameEH406349
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length627
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.726e-14
Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 3
Query:    9 DGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            +GKV+V E +LPE P+TS  +K+  H+D++M+  +PGGKERT  EF  LA GAGF G          WVMEF+K
Sbjct:  286 NGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 3
Query:    6 EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            E+GKVIV E +LPE P+T+  +++  H+DV+M+  +PGGKERT  EF  LA GAGF G +      + WVMEF K
Sbjct:  280 ENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13
Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 3
Query:    6 EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            E+GKVI+ E +LPE P++++ +++  H+DV+M+  +PGGKERT  EF  LA GAGF G        + W+ME  K
Sbjct:  289 ENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13
Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = 3
Query:    6 EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            E+GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF +LA GAGF G        +  V+EF K
Sbjct:  288 ENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.551e-13
Identity = 35/75 (46.67%), Postives = 50/75 (66.67%), Query Frame = 3
Query:    6 EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            ++GKVIV E +LP  P++S+ +K   H+DV+M+  +PGGKERT+ EF  LA GAGF G        + ++MEF K
Sbjct:  289 DNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 3
Query:    6 EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            E+GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G        +  V+EF K
Sbjct:  289 ENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13
Identity = 37/73 (50.68%), Postives = 47/73 (64.38%), Query Frame = 3
Query:   12 GKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            GKVIV E +LP  P+TS+ +K+  H+D +M+  +PGGKERT+ EF TLA GAGF G           VMEF K
Sbjct:  292 GKVIVAECVLPVYPDTSLATKNVIHIDCIMLAHNPGGKERTQKEFETLAKGAGFQGFQVMCCAFGTHVMEFLK 364          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12
Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 3
Query:    6 EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            ++GKVI+ E +LP  P++S+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G +   +  + +V+EF K
Sbjct:  289 DNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12
Identity = 37/75 (49.33%), Postives = 49/75 (65.33%), Query Frame = 3
Query:    6 EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            E+GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G        +  V+EF K
Sbjct:  289 ENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of EH406349 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.109e-12
Identity = 34/75 (45.33%), Postives = 50/75 (66.67%), Query Frame = 3
Query:    6 EDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGSLWVMEFYK 230
            ++GKVI+ E +LPE P+TS+ +++  H+DV+M+  +PGGKERT  EF  LA GAGF       +  + W+ME  K
Sbjct:  276 DNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
The following BLAST results are available for this feature:
BLAST of EH406349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
COMT1_CAPAN1.726e-1450.00Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_ZINEL2.943e-1450.67Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_CATRO2.492e-1345.33Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT2_POPTM5.551e-1349.33Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_MEDSA5.551e-1346.67Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_POPKI9.468e-1349.33Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_EUCGU9.468e-1350.68Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_PRUDU1.237e-1245.33Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_POPTM1.237e-1249.33Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_COFCA2.109e-1245.33Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB3CB07ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406349 ID=EH406349; Name=EH406349; organism=Citrus clementina; type=EST; length=627bp
GCGGGGAAGATGGAAAGGTAATCGTTGTGGAGTCAATGCTTCCAGAAGTT
CCTAATACAAGCATTGAATCAAAATCAAATTCCCATTTGGACGTGCTTAT
GATGATTCAAAGTCCCGGTGGAAAGGAGAGAACAAGGCATGAATTCATGA
CCCTGGCTACTGGCGCTGGTTTTGGTGGGATCAGTTGTGAACTTGCTATT
GGTAGTCTCTGGGTTATGGAGTTCTATAAGTAGAGTGCATGCCCATGCAT
CCTAGAAATAAAACAAATCTTGTGTTGATTGTCTTGCGTGTATCTCTTTC
CAAGCATGCTGATATGTCTCCCAAAGACGAGCAAGAACCCATGCATTTGA
CAAACTTCCCACGTACCTGATAGCCATGCTTGAGAGGAGGAGTCTAGGAC
TTAATAATAAGTGCTTTGAAATAAATGGCTGCTTGACACGTGGTCTATCA
ACTATGTGTGCAATATTGTTACCCATATTTCCTATTATTTCTAGTATTTC
ATGTGTTATTGTCTAGGGTGTCTTTTGTTGTTCCAAGGGCAGTTACTAGC
GTAGATTGCGTGTTTCCAATTGGCTCTTATAAAAAGCCTAAAGCTATCTG
AATAAAGGATGCAGAAAAATTATTTCA
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