FC868603

Overview
NameFC868603
Unique NameFC868603
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC868603 vs. ExPASy Swiss-Prot
Match: BAHC1_HUMAN (BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=BAHCC1 PE=1 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 9.744e-11
Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 3 
Query:  306 IRGTNKIVRVGDCVLMRPSDTGKPPYVARIEKIESDARNNVKVRVRWYYRPEESLGGRRQFHGAKELFLSDHYDVQSAHTIEGKCIVHSFKNYTKL 593
            +RG  + +RVGDC +   +     PY+ RIE +     +N+ V+V+W+Y PEE+  G+RQ  G   L+ S H D     TI  KC V + + Y ++
Sbjct: 2478 VRG-EETLRVGDCAVFLSAGRPNLPYIGRIESMWESWGSNMVVKVKWFYHPEETKLGKRQCDGKNALYQSCHEDENDVQTISHKCQVVAREQYEQM 2572
The following BLAST results are available for this feature:
BLAST of FC868603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
BAHC1_HUMAN9.744e-1135.42BAH and coiled-coil domain-containing protein 1 OS... [more]
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Properties
Property NameValue
Genbank descriptionC31002E04EF AbioticL1 Citrus clementina cDNA clone C31002E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868603 ID=FC868603; Name=FC868603; organism=Citrus clementina; type=EST; length=660bp
GATAGAGAGTGACACTCTCCTCCCCGCTTTCTCCCTCTTTCTCAATGAGA
AGGATTTAGGGTTTCCGTTCGTTCCCAAATTCTAGTGTTTTAACCATTAA
CACCCTGCATTTCCACCGTTTGAGTAAATTCAAAATTTCCCATCTTCGAA
AATCTCCTCCCCCCTCCCCCCCCAAAAAAAAAAGTCTTTTTGCTGTTAGT
TTAGCTTAGAAAAAAGAAAAAAAAAACCTAGCTTTGATGGCAAAAACTAG
ACCAGGAATCCCAACCAAGACCAAAACTGGCAAAAGAGACCTTGAATCTT
ATACAATCAGAGGCACCAACAAGATTGTTAGAGTTGGGGATTGTGTGCTG
ATGCGACCATCTGACACTGGTAAGCCCCCATATGTGGCTCGAATTGAGAA
GATTGAATCCGATGCTCGAAACAATGTTAAGGTACGTGTAAGGTGGTATT
ATCGCCCAGAGGAATCACTTGGAGGACGGAGGCAATTTCATGGTGCAAAG
GAGCTCTTTTTATCGGACCACTATGATGTGCAGAGTGCTCACACAATTGA
GGGGAAGTGTATTGTGCACTCTTTCAAGAACTACACAAAATTAGAGAATG
TTGGTGCTGAAGATTACTATTGTAGATTTGAGTATAAGGCTGCTAGTGGG
GGGTTTACGC
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