FC868615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: SC61A_DICDI (Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.597e-64 Identity = 119/191 (62.30%), Postives = 143/191 (74.87%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WK FSPTT++ G G EFEGAVIALFHLL+T+ +KV AL+EAFYRQNLPNITNLLATVL+F++V+YFQGF+V LPV+S GQQG YPIKLFYTSN+PIILQSALVSNLYFISQLLYR++ N VNL G W+ SEYS IPV GL YY+++P+ + + F F F + WIEV G Sbjct: 193 VWKTFSPTTVSVGKGTEFEGAVIALFHLLLTRNDKVRALKEAFYRQNLPNITNLLATVLIFMVVIYFQGFRVDLPVKSTRVSGQQGTYPIKLFYTSNIPIILQSALVSNLYFISQLLYRRFPDNILVNLFGAWRTSEYSQQMIPVSGLTYYISSPNNMSAVLADPFHALFYITFMLTSCALFSKVWIEVSG 383
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: SC61A_GADOC (Protein transport protein Sec61 subunit alpha OS=Gadus ogac GN=sec61a PE=2 SV=3) HSP 1 Score: 230.72 bits (587), Expect = 4.072e-60 Identity = 115/193 (59.59%), Postives = 138/193 (71.50%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTT+N+G G EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY + P G S+ F F +TWIEV G Sbjct: 192 VWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYYFSPPESFGSVLDDPVHASIYIVFMLGSCAFFSKTWIEVSG 384
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: S61A2_MOUSE (Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus GN=Sec61a2 PE=2 SV=3) HSP 1 Score: 230.335 bits (586), Expect = 5.318e-60 Identity = 118/193 (61.14%), Postives = 140/193 (72.54%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTTIN+G G EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P +G V F F +TWIEV G Sbjct: 192 VWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSG 384
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: S61A2_HUMAN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3) HSP 1 Score: 230.335 bits (586), Expect = 5.318e-60 Identity = 118/193 (61.14%), Postives = 140/193 (72.54%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTTIN+G G EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P +G V F F +TWIEV G Sbjct: 192 VWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSG 384
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: S61A2_BOVIN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Bos taurus GN=SEC61A2 PE=2 SV=3) HSP 1 Score: 230.335 bits (586), Expect = 5.318e-60 Identity = 118/193 (61.14%), Postives = 140/193 (72.54%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTTIN+G G EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P +G V F F +TWIEV G Sbjct: 192 VWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSG 384
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: S61A2_ONCMY (Protein transport protein Sec61 subunit alpha isoform B OS=Oncorhynchus mykiss GN=sec61ab PE=2 SV=3) HSP 1 Score: 229.565 bits (584), Expect = 9.071e-60 Identity = 115/193 (59.59%), Postives = 138/193 (71.50%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTT+N+G G EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NLLATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY + P G ++ F F +TWIEV G Sbjct: 192 VWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLLATVFVFGVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYFSPPESFGSVLDDPIHAAIYICFMLGSCAFFSKTWIEVSG 384
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: S61A1_ONCMY (Protein transport protein Sec61 subunit alpha isoform A OS=Oncorhynchus mykiss GN=sec61aa PE=2 SV=3) HSP 1 Score: 229.18 bits (583), Expect = 1.185e-59 Identity = 113/193 (58.55%), Postives = 139/193 (72.02%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTT+N+G G EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL Y+++ P G ++ F F +TWIEV G Sbjct: 192 VWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPIHAAIYIVFMLGSCAFFSKTWIEVSG 384
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: S61A1_DANRE (Protein transport protein Sec61 subunit alpha-like 1 OS=Danio rerio GN=sec61al1 PE=2 SV=3) HSP 1 Score: 229.18 bits (583), Expect = 1.185e-59 Identity = 114/193 (59.07%), Postives = 138/193 (71.50%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTT+N+G G EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY++ P G + F F +TWIEV G Sbjct: 192 VWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLDDPVHAVIYIVFMLGSCAFFSKTWIEVSG 384
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: SC61A_BORSA (Protein transport protein Sec61 subunit alpha OS=Boreogadus saida GN=sec61a PE=2 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 1.547e-59 Identity = 113/193 (58.55%), Postives = 139/193 (72.02%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTT+N+G G EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL Y+++ P G ++ F F +TWIEV G Sbjct: 192 VWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFIVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPVHAAIYIVFMLGSCAFFSKTWIEVSG 384
BLAST of FC868615 vs. ExPASy Swiss-Prot
Match: S61A2_DANRE (Protein transport protein Sec61 subunit alpha-like 2 OS=Danio rerio GN=sec61al2 PE=2 SV=3) HSP 1 Score: 228.794 bits (582), Expect = 1.547e-59 Identity = 113/193 (58.55%), Postives = 138/193 (71.50%), Query Frame = 2 Query: 2 IWKAFSPTTINSGPGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPSKLG*YGSQSFPCSVLPGFYAYCLCSFLETWIEVPG 574 +WKAFSPTT+N+G G EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY++ P G + F F +TWIEV G Sbjct: 192 VWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYYLSPPESFGTVLEDPIHAIIYIIFMLGSCAFFSKTWIEVSG 384 The following BLAST results are available for this feature:
BLAST of FC868615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868615 ID=FC868615; Name=FC868615; organism=Citrus clementina; type=EST; length=587bpback to top |