FC868634

Overview
NameFC868634
Unique NameFC868634
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length705
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9480 contig Ccv1_Contig9480:14..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868634 vs. ExPASy Swiss-Prot
Match: E134_MAIZE (Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.999e-35
Identity = 82/194 (42.27%), Postives = 116/194 (59.79%), Query Frame = 1
Query:   79 SQCFENPPKLSPGSG--CGAGTVQQ--LGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHDIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEIL 648
            SQC +NPP  S        AG V     GGL  YV+G+    S  A++L SDVFGYEAPL R++ DKVA AG+ VV PDF  GD + D  N       W + H+  K   DAK + AALK +G S +   G+CWGG ++ ++  + D++A  + HP ++T DD+ E+K P+ ILGA+ D  +PP+++ RF  +L
Sbjct:   27 SQCLDNPPDRSIHGRQLAEAGEVVHDLPGGLRAYVSGAA--SSSRAVVLASDVFGYEAPLLRQIVDKVAKAGYFVVVPDFLKGDYLDDKKN----FTEWLEAHSPVKAAEDAKPLFAALKKEGKS-VAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILGAQNDTTTPPKEVYRFVHVL 213          
BLAST of FC868634 vs. ExPASy Swiss-Prot
Match: CMBL_MOUSE (Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.255e-19
Identity = 64/199 (32.16%), Postives = 100/199 (50.25%), Query Frame = 1
Query:  127 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCL----VKIYPRVSHG 705
            G G   Q+  +  YVT S P D+  A++++ D+FG++ P  R +AD +A  G+  + PDFF G    D         AW K  N  K   +  +V+  L+ +     IG  GFCWGGVV  ++ +++ DI+A V ++      +D+  +K P   + AE D V P E +      L+ KLK  C+    VK +   +HG
Sbjct:   20 GMGHEVQVEHIKAYVTRS-PVDAGKAVIVVQDIFGWQLPNTRYMADMIARNGYTTIVPDFFVGQEPWDPAGDWSTFPAWLKSRNARKVNREVDAVLRYLRQQCHAQKIGIVGFCWGGVVVHQVMTAYPDIRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDTVIPLEQV----STLTQKLKEHCIVNYQVKTFSGQTHG 213          
BLAST of FC868634 vs. ExPASy Swiss-Prot
Match: CMBL_PONAB (Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 62/199 (31.16%), Postives = 97/199 (48.74%), Query Frame = 1
Query:  127 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLV----KIYPRVSHG 705
            G G   Q+  +  YVT S P D+  A+++I D+FG++ P  R +AD ++G G+  + PDFF G    D +        W K  N  K   +  +++  LK +     IG  GFCWGG+    L   + + +A V ++      +DI  +K P   + AE D V P +D+     +L+ KLK  C V    K +   +HG
Sbjct:   20 GLGREVQVEHIKAYVTKS-PVDAGKAVIVIQDIFGWQLPNTRYMADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGIAVHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDV----SLLTQKLKEHCKVEYQIKTFSGQTHG 213          
BLAST of FC868634 vs. ExPASy Swiss-Prot
Match: CMBL_RAT (Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 62/199 (31.16%), Postives = 98/199 (49.25%), Query Frame = 1
Query:  127 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCL----VKIYPRVSHG 705
            G G   Q+  +  YVT S P D+  A++++ D+FG++    R +AD +AG G+  + PDFF G    D          W K  N  K   +  +V+  LK +     IG  GFCWGG+V   + +++ +++A V ++      +D+  +K P   + AE D V P E +     IL  KLK  C+    VK +   +HG
Sbjct:   20 GMGQEVQVEHIKAYVTRS-PVDAGKAVIVVQDIFGWQLSNTRYMADMIAGNGYTTIVPDFFVGQEPWDPAGDWSTFPEWLKSRNARKINREVDAVLRYLKQQCHAQKIGIVGFCWGGIVVHHVMTTYPEVRAGVSVYGIIRDSEDVYNLKNPTLFIFAENDAVIPLEQV----SILIQKLKEHCIVNYQVKTFSGQTHG 213          
BLAST of FC868634 vs. ExPASy Swiss-Prot
Match: CMBL_XENTR (Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18
Identity = 58/193 (30.05%), Postives = 93/193 (48.19%), Query Frame = 1
Query:  133 GTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHG 705
            G   Q+  +  YV+       K A++++ D+FG++ P  R +AD +   G++ + PDFF G      +N +     W +     K   +   V+  LK +  V  IG  GFCWGGVV   L   + +++A V  +     V+D   +  P   + AE+DHV P E +    E L    K D  VK++P+ +HG
Sbjct:   22 GQEVQIEHIKAYVSKPHSSTDK-AVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQEPWKPSNDRSTFTEWLQTRQATKVEKEINVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLKYPELKAGVSFYGIIRDVEDRYNLLNPTLFIFAEMDHVIPLEQVSLLEEKLKVHSKVDFQVKVFPKQTHG 213          
BLAST of FC868634 vs. ExPASy Swiss-Prot
Match: CMBL_HUMAN (Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 62/199 (31.16%), Postives = 96/199 (48.24%), Query Frame = 1
Query:  127 GAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLV----KIYPRVSHG 705
            G G   Q+  +  YVT S P D+  A+++I D+FG++ P  R +AD ++G G+  + PDFF G    D +        W K  N  K   +  +++  LK +     IG  GFCWGG     L   + + +A V ++      +DI  +K P   + AE D V P +D+     +L+ KLK  C V    K +   +HG
Sbjct:   20 GLGREVQVEHIKAYVTKS-PVDAGKAVIVIQDIFGWQLPNTRYIADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQCHAQKIGIVGFCWGGTAVHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDVVIPLKDV----SLLTQKLKEHCKVEYQIKTFSGQTHG 213          
BLAST of FC868634 vs. ExPASy Swiss-Prot
Match: CMBL_XENLA (Carboxymethylenebutenolidase homolog OS=Xenopus laevis GN=cmbl PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18
Identity = 56/189 (29.63%), Postives = 91/189 (48.15%), Query Frame = 1
Query:  145 QLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTDKGYVDAKSVIAALKSK-GVSAIGAAGFCWGGVVAAKLASSH-DIQAAVVLHPGAITVDDINEIKVPVAILGAEIDHVSPPEDLKRFGEILSAKLKNDCLVKIYPRVSHG 705
            Q+  +  YV+       K A++++ D+FG++ P  R +AD +   G++ + PDFF G      +N       W +     K   +   V+  LK +  V  IG  GFCWGGVV   L   + +++A V  +     V+D   +  P   + AEIDHV P E +    + L    K D  +K++P+ +HG
Sbjct:   26 QIEHIKAYVSKPHSSTDK-AVIVVQDIFGWQLPNTRFMADLLTAHGYITICPDFFVGQESWKPSNDWSTFTEWLQTRQATKVEKEMNVVLKYLKEQCHVKKIGVIGFCWGGVVTHHLMLKYPELKAGVSFYGIIRDVEDRYNLLNPTLFIFAEIDHVIPLEQVSLLEQKLKVHSKVDFQIKVFPKQTHG 213          
BLAST of FC868634 vs. ExPASy Swiss-Prot
Match: AIM2_YEAST (Protein AIM2 OS=Saccharomyces cerevisiae GN=AIM2 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16
Identity = 67/222 (30.18%), Postives = 106/222 (47.75%), Query Frame = 1
Query:   67 NMSGSQCFENPPKLSPGSGCGAGTVQQLGGLNTYVTGSGPPDSKSAILLISDVFGYEAPLFRKLADKVAGAGFLVVAPDFFYGDPIVDLNNPQFDREAWRKIHNTD--KGYVDAKSVIAALKSKGVSAIGAAGFCWGGVVAAKLASSHD--IQAAVVLHPGAITVDDINEI--KVPVAILGAEIDHVSPPEDLKRFGEILSAKLKND---CLVKIYPRVSHG 705
            N  G  CFE         G   G  +++ GL+TY  GS  P  K  I++++DV+G +       ADK A AG++V  PD  +GD I   ++   DR+AW + H+ +  K  VD    +  L+      IG  G+C+G   A +  S       AA + HP  +++++I  I  K P+ I  AE DH+ P         +   KLK++     + ++  V+HG
Sbjct:    4 NQPGKCCFEGVCH----DGTPKGRREEIFGLDTYAAGSTSPKEK-VIVILTDVYGNKFNNVLLTADKFASAGYMVFVPDILFGDAI--SSDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLE-YDPKFIGVVGYCFGAKFAVQHISGDGGLANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIFP----ANLRHLTEEKLKDNHATYQLDLFSGVAHG 213          
The following BLAST results are available for this feature:
BLAST of FC868634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
E134_MAIZE4.999e-3542.27Endo-1,3;1,4-beta-D-glucanase OS=Zea mays PE=1 SV=... [more]
CMBL_MOUSE2.255e-1932.16Carboxymethylenebutenolidase homolog OS=Mus muscul... [more]
CMBL_PONAB1.461e-1831.16Carboxymethylenebutenolidase homolog OS=Pongo abel... [more]
CMBL_RAT1.909e-1831.16Carboxymethylenebutenolidase homolog OS=Rattus nor... [more]
CMBL_XENTR2.493e-1830.05Carboxymethylenebutenolidase homolog OS=Xenopus tr... [more]
CMBL_HUMAN3.256e-1831.16Carboxymethylenebutenolidase homolog OS=Homo sapie... [more]
CMBL_XENLA7.253e-1829.63Carboxymethylenebutenolidase homolog OS=Xenopus la... [more]
AIM2_YEAST1.047e-1630.18Protein AIM2 OS=Saccharomyces cerevisiae GN=AIM2 P... [more]
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Properties
Property NameValue
Genbank descriptionC31002H06EF AbioticL1 Citrus clementina cDNA clone C31002H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868634 ID=FC868634; Name=FC868634; organism=Citrus clementina; type=EST; length=705bp
CGGGGGAGATTCCCTCCATTTCTTCTCAAGGTAATACAGTTAATTCCATT
ATCGAATTTGGGTTTGAATATGTCAGGCTCACAGTGCTTTGAGAACCCAC
CAAAGCTGAGCCCGGGTTCGGGTTGTGGAGCTGGGACTGTACAGCAACTC
GGTGGCCTCAACACTTATGTGACCGGGTCTGGTCCTCCAGATTCCAAGTC
TGCTATTCTTCTCATTTCTGACGTTTTTGGGTATGAAGCTCCTCTTTTCA
GGAAACTTGCCGACAAAGTTGCCGGTGCTGGATTCTTAGTTGTGGCTCCT
GATTTCTTTTATGGCGACCCTATTGTTGATCTGAACAACCCTCAGTTTGA
TCGAGAGGCCTGGAGAAAAATTCATAACACGGACAAAGGTTATGTAGATG
CCAAATCAGTAATTGCTGCTTTGAAAAGTAAAGGTGTATCTGCCATAGGG
GCAGCAGGTTTTTGCTGGGGAGGCGTTGTAGCTGCAAAATTGGCAAGTTC
TCATGATATTCAGGCTGCAGTTGTGTTGCATCCTGGTGCCATCACAGTCG
ATGATATAAATGAGATTAAAGTTCCAGTTGCTATTTTGGGAGCTGAGATT
GATCACGTTTCCCCACCAGAAGATCTGAAACGTTTTGGAGAAATATTATC
TGCAAAACTGAAGAATGACTGCCTTGTGAAAATATACCCTCGTGTATCTC
ATGGA
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