FC868688

Overview
NameFC868688
Unique NameFC868688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length734
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig90 contig Ccv1_Contig90:28..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.407e-66
Identity = 135/216 (62.50%), Postives = 155/216 (71.76%), Query Frame = 3
Query:   27 NWCLTSVSQAQSSLIKSSTLRPSIVARLN---SPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            N CLT +S AQ+SL K +  RP   ARL+   S  S PSLIRNEPVFAAP PIINP  RE+MA +SY                  P+AAA+V+QITA+LQ+   +K FD VE +K GFIHFK EKYEKNPALY EL+KGQSPK+MVFACSDSRVCPSHVL+FQPGEAFVVRN+AN+VP YD+T+            LHLKV NIVVIGHSACGGIK
Sbjct:    7 NSCLT-ISPAQASLKKPT--RPVAFARLSNSSSSTSVPSLIRNEPVFAAPTPIINPILREEMAKESYEQAIAALEKLLSEKGELGPIAAARVDQITAELQSSDGSKPFDPVEHMKAGFIHFKTEKYEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIK 219          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 2.884e-65
Identity = 138/224 (61.61%), Postives = 152/224 (67.86%), Query Frame = 3
Query:   36 LTSVSQAQSSLIKSSTLRPSIVARL------------NSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQT--PSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            LTS+S +QSSL K S    S VA L            +S  S P+LIRNEPVFAAPAPII P W E+M  ++Y                   VAAAKVEQITA LQT   SD KAFD VE IK+GFI FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDFQPG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIK
Sbjct:   11 LTSLSPSQSSLQKLSLRTSSTVACLPPASSSSSSSSSSSSRSVPTLIRNEPVFAAPAPIIAPYWSEEMGTEAYDEAIEALKKLLIEKEELKTVAAAKVEQITAALQTGTSSDKKAFDPVETIKQGFIKFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIK 234          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.481e-61
Identity = 124/209 (59.33%), Postives = 142/209 (67.94%), Query Frame = 3
Query:   39 TSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            +S S A+S ++ +     S  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIK
Sbjct:   23 SSTSSARSGVLSAKFTCNS--SSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIK 228          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 1.934e-61
Identity = 127/216 (58.80%), Postives = 151/216 (69.91%), Query Frame = 3
Query:   27 NWCLTSVSQAQSSLIKSSTLRPSIVA--RLNSPAS-PPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            N CLTS+S +++ L  +STLRP+ +A  R+N  +S PPSLIRN+PVFAAPAPII P  +EDMA   Y                    AA+KV QIT++L       A   V+RIKEGFI FK+EKYEKNPALY EL+KGQ+PK+MVFACSDSRVCPSHVLDFQPGEAF+VRN+AN+VP +D+ K            LHLKV NIVVIGHSACGGIK
Sbjct:    5 NGCLTSISPSRTQLKNTSTLRPTFIANSRVNPSSSVPPSLIRNQPVFAAPAPIITPTLKEDMA---YEEAIAALKKLLSEKGELENEAASKVAQITSELADGGTPSASYPVQRIKEGFIKFKKEKYEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIK 217          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.934e-61
Identity = 124/209 (59.33%), Postives = 142/209 (67.94%), Query Frame = 3
Query:   39 TSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            +S S A+S ++ +     S  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIK
Sbjct:   23 SSTSSARSGVLSARFTCNS--SSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIK 228          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 235.343 bits (599), Expect = 2.527e-61
Identity = 125/220 (56.82%), Postives = 142/220 (64.55%), Query Frame = 3
Query:    6 NVDSFDPNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPASPPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            N  SF     L   S +  S + S+    +  +  +S A+PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAA +++QITAQ   P     FD VERIK GF+ FK EK+  NPALY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIK
Sbjct:   10 NAPSFVNASSLKKASTSARSGVLSARFTCNSSSSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKTLIEKGELEPVAATRIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIK 228          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 7.351e-61
Identity = 124/217 (57.14%), Postives = 140/217 (64.52%), Query Frame = 3
Query:   24 PNWCLTSVSQAQSSLIKSSTLRPSIVARLNSPAS---PPSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            P++   S  +  SS  +S  L        +S +S   PPSLIRNEPVFAAPAPII PNW ED  N+SY                  PVAAA+++QITAQ   P     FD VERIK GF+ FK EK+  NP LY ELAKGQSPK+MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPP+D+TK            LHLKV  I VIGHS CGGIK
Sbjct:   12 PSFVNASSLKKSSSSARSGVLSARFTCNSSSSSSSATPPSLIRNEPVFAAPAPIITPNWTED-GNESYEEAIDALKKMLIEKGELEPVAAARIDQITAQAAAPDTKAPFDPVERIKSGFVKFKTEKFVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIK 227          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.142e-59
Identity = 127/218 (58.26%), Postives = 150/218 (68.81%), Query Frame = 3
Query:   36 LTSVSQAQSSLIKSSTLRPSIVARLNSPASP-----PSLIRNEPVFAAPAPIINPNWREDMANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQTPSDTKAF---DSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            L+S+S A++S  K +TLRP + A LN+ +S      PSLI+++PVFA+ +PII P  RE+M  + Y                    AA KVEQITAQL T S +      ++ ERIK GF+HFK+EKY+KNPALY ELAKGQSP +MVFACSDSRVCPSHVLDFQPGEAFVVRNVAN+VPPYDQ K            LHLKVSNIVVIGHSACGGIK
Sbjct:   11 LSSLSPAKTST-KRTTLRPFVSASLNTSSSSSSSTFPSLIQDKPVFASSSPIITPVLREEMG-KGYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTSSSDGIPKSEASERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIK 226          

HSP 2 Score: 23.483 bits (49), Expect = 2.142e-59
Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  662 QGLMSFTFDGT-TPPIH*DWVKL 727
            +GL+SF FDGT +     +WVK+
Sbjct:  226 KGLLSFPFDGTYSTDFIEEWVKI 248          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.423e-50
Identity = 101/157 (64.33%), Postives = 115/157 (73.25%), Query Frame = 3
Query:  201 MANQSYXXXXXXXXXXXXXXXXXXPVAAAKVEQITAQLQ--TPSDTKAFDSVERIKEGFIHFKREKYEKNPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            M N+SY                   VAAAKV++ITA+LQ  + SD+K+FD VERIKEGF+ FK+EKYE NPALY ELAKGQSPKYMVFACSDSRVCPSHVLDF PG+AFVVRN+AN+VPP+D+ K            LHLKV NIVVIGHSACGGIK
Sbjct:    1 MGNESYEDAIEALKKLLIEKDDLKDVAAAKVKKITAELQAASSSDSKSFDPVERIKEGFVTFKKEKYETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIK 157          
BLAST of FC868688 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.887e-32
Identity = 65/88 (73.86%), Postives = 70/88 (79.55%), Query Frame = 3
Query:  402 NPALYSELAKGQSPKYMVFACSDSRVCPSHVLDFQPGEAFVVRNVANIVPPYDQTKXXXXXXXXXXXXLHLKVSNIVVIGHSACGGIK 665
            NP LY ELAKGQSPK++VFACSDSRVCPSH+LDFQPGEAFVVRN+AN+VPPYD  K            LHLKV NIVVIGHS CGGIK
Sbjct:    1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIK 88          
The following BLAST results are available for this feature:
BLAST of FC868688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CAHC_TOBAC3.407e-6662.50Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_ARATH2.884e-6561.61Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHX_FLABR1.481e-6159.33Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAHC_SPIOL1.934e-6158.80Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAH1_FLALI1.934e-6159.33Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLABI2.527e-6156.82Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHX_FLAPR7.351e-6157.14Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHC_PEA2.142e-5958.26Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAH2_ARATH3.423e-5064.33Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAH2_FLALI1.887e-3273.86Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank descriptionC31003E07EF AbioticL1 Citrus clementina cDNA clone C31003E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868688 ID=FC868688; Name=FC868688; organism=Citrus clementina; type=EST; length=734bp
GGGACAATGTCGACAGCTTCGATCCTAACTGGTGCCTTACTTCTGTTTCT
CAAGCTCAATCCTCTCTCATCAAAAGCTCCACATTACGTCCCTCCATCGT
TGCAAGGCTCAACTCTCCTGCTTCTCCTCCTAGCCTCATCCGAAACGAGC
CCGTTTTTGCTGCACCAGCTCCTATCATCAACCCTAACTGGAGGGAAGAC
ATGGCAAATCAGTCGTACGAGGAAGCCATTGAAGCTCTCAAGAAACTTCT
CAAGGAGAAGGAAGACTTGAAACCTGTTGCTGCTGCAAAAGTAGAGCAGA
TTACTGCGCAGCTACAGACTCCATCTGACACCAAAGCATTTGATTCCGTG
GAGAGGATCAAAGAGGGCTTCATTCACTTCAAGAGAGAAAAATACGAGAA
AAATCCAGCTCTGTACTCTGAGCTAGCCAAAGGCCAAAGCCCGAAGTATA
TGGTATTTGCCTGCTCAGACTCCAGGGTTTGCCCGTCCCATGTGTTGGAT
TTTCAACCTGGGGAAGCTTTCGTGGTTCGCAATGTTGCTAACATTGTTCC
ACCCTATGATCAGACTAAATATGCTGGAGTTGGAGCTGCTGTCGAGTATG
CAGTTTTGCATCTCAAGGTTTCAAACATTGTGGTCATTGGGCACAGCGCC
TGTGGTGGCATCAAGGACTCATGTCTTTCACATTTGATGGAACAACTCCA
CCGATTCATTGAGACTGGGTGAAATTGGCATCCC
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