FC868700

Overview
NameFC868700
Unique NameFC868700
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15282 contig Ccv1_Contig15282:829..1534. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 9.148e-85
Identity = 136/218 (62.39%), Postives = 174/218 (79.82%), Query Frame = 3
Query:   15 KKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS---AVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPP 659
            +KGYWQF++GD+LI  + TG C+GGC+AI DSGTSLLAGPTPV+T INHAIG +GVVS +CK VV+QYG  I DLL+S   P+K+C QI LC F+G   VS GI++VV++    + DS    +CS CEMTVVW+QNQL+Q QTKE++++YINELCD +P+PMG+S +DCG++ +MP VSFTIG KIF+L+PE+YILK GEG    CISGF AFD+PPP
Sbjct:  264 QKGYWQFDMGDVLIDGEPTGFCDGGCSAIADSGTSLLAGPTPVITMINHAIGAKGVVSQQCKAVVAQYGQTIMDLLLSEADPKKICSQINLCTFDGTRGVSMGIESVVDENAGKSSDSLHDGMCSVCEMTVVWMQNQLRQNQTKERIINYINELCDRMPSPMGQSAVDCGQLSSMPTVSFTIGGKIFDLAPEEYILKVGEGPVAQCISGFTAFDIPPP 481          

HSP 2 Score: 37.7354 bits (86), Expect = 9.148e-85
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  659 RGPLWILGDVFMGVYH 706
            RGPLWILGDVFMG YH
Sbjct:  482 RGPLWILGDVFMGRYH 497          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.459e-81
Identity = 129/215 (60.00%), Postives = 170/215 (79.07%), Query Frame = 3
Query:   15 KKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPP 659
            +KGYWQFN+GD+LI   STG C  GCAAIVDSGTSLLAGPT +V ++NHAIG EG++S ECK VVS+YG++I +LL++   P+KVC Q+GLC F+G   VS GI++VV+KEN+  G  A+CS CEM VVW++NQL++ +TKE +L+Y N+LC+ LP+P GES + C +I  MPN++FTI +K F L+PEQYI+K  +G   VCISGFMAFD+PPP
Sbjct:  252 RKGYWQFNMGDLLIDGHSTGFCAKGCAAIVDSGTSLLAGPTAIVAQVNHAIGAEGIISTECKEVVSEYGEMILNLLIAQTDPQKVCSQVGLCMFDGKRSVSNGIESVVDKENL--GSDAMCSVCEMAVVWIENQLRENKTKELILNYANQLCERLPSPNGESTVSCHQISKMPNLAFTIANKTFILTPEQYIVKLEQGGQTVCISGFMAFDIPPP 464          

HSP 2 Score: 38.891 bits (89), Expect = 3.459e-81
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  659 RGPLWILGDVFMGVYH 706
            RGPLWILGDVFMG YH
Sbjct:  465 RGPLWILGDVFMGAYH 480          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.898e-80
Identity = 129/218 (59.17%), Postives = 165/218 (75.69%), Query Frame = 3
Query:   15 KKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGD---SAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPP 659
            +KGYWQF++GD+L+G +STG C GGCAAI DSGTSLLAGPT ++TEIN  IG  GVVS ECK +VSQYG  I DLL++   P+K+C Q+GLC F+G   VS GI++VV+ E V +       +CSACEM VVW+QNQL Q +T++ +L Y+N+LC+ LP+PMGES +DCG + +MP++ FTIG K F L PE+YILK GEG A  CISGF A D+PPP
Sbjct:  259 QKGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSLGSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPP 476          

HSP 2 Score: 38.1206 bits (87), Expect = 2.898e-80
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  659 RGPLWILGDVFMGVYH 706
            RGPLWILGDVFMG YH
Sbjct:  477 RGPLWILGDVFMGPYH 492          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 6.429e-80
Identity = 133/221 (60.18%), Postives = 165/221 (74.66%), Query Frame = 3
Query:   15 KKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEKENVSAGDS------AVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPP 659
            +KGYWQF +GD+LIG ++TG C  GC+AI DSGTSLLAGPT ++TEIN  IG  GVVS ECK VVSQYG  I DLL++   P K+C Q+GLC F+G   VS GIK+VV+ E   AG+S       +C+ACEM VVW+QNQL Q +T++ +L+YIN+LCD LP+PMGES +DCG + +MP +SFTIG K F L PE+YILK GEG A  CISGF A D+PPP
Sbjct:  260 QKGYWQFEMGDVLIGGKTTGFCASGCSAIADSGTSLLAGPTAIITEINEKIGATGVVSQECKTVVSQYGQQILDLLLAETQPSKICSQVGLCTFDGKHGVSAGIKSVVDDE---AGESNGLQSGPMCNACEMAVVWMQNQLAQNKTQDLILNYINQLCDKLPSPMGESSVDCGSLASMPEISFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPP 477          

HSP 2 Score: 38.891 bits (89), Expect = 6.429e-80
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = 2
Query:  659 RGPLWILGDVFMGVYH 706
            RGPLWILGDVFMG YH
Sbjct:  478 RGPLWILGDVFMGAYH 493          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 2.884e-71
Identity = 115/216 (53.24%), Postives = 161/216 (74.54%), Query Frame = 3
Query:   15 KKGYWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEGVVSAECKLVVSQYGDLIWDLLVSGLLPEKVCQQIGLCAFNGAEYVSTGIKTVVEK-ENVSAGDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPP 659
            +KGYWQF +GD+LIG+++TG C  GCAAI DSGTSLLAG T +VT+IN AIG  GV+S +CK +V QYG  + ++L+S   PEK+C Q+ LC+F+G+   S  I++VV+K +  S+G    C  C   VVW+QNQ++Q +T+E +++Y+++LC+ LP+PMGES +DC  + +MPN++FT+G K FNLSPEQY+LK GEG    CISGF A D+ PP
Sbjct:  226 QKGYWQFEMGDVLIGDKTTGFCASGCAAIADSGTSLLAGTTTIVTQINQAIGAAGVMSQQCKSLVDQYGKSMIEMLLSEEQPEKICSQMKLCSFDGSHDTSMIIESVVDKSKGKSSGLPMRCVPCARWVVWMQNQIRQNETEENIINYVDKLCERLPSPMGESAVDCSSLSSMPNIAFTVGGKTFNLSPEQYVLKVGEGATAQCISGFTAMDVAPP 441          

HSP 2 Score: 36.965 bits (84), Expect = 2.884e-71
Identity = 15/19 (78.95%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  650 ASSRGPLWILGDVFMGVYH 706
            A   GPLWILGDVFMG YH
Sbjct:  439 APPHGPLWILGDVFMGQYH 457          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.133e-15
Identity = 27/62 (43.55%), Postives = 44/62 (70.97%), Query Frame = 3
Query:  474 SLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPP 659
            ++P   GE +IDC ++PT+P +SF +G K ++L+ EQY+LK  +G   +C+SG M  ++PPP
Sbjct:  303 AIPLIQGEYMIDCKKVPTLPTISFNVGGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPP 364          

HSP 2 Score: 32.7278 bits (73), Expect = 1.133e-15
Identity = 14/25 (56.00%), Postives = 16/25 (64.00%), Query Frame = 2
Query:  632 LHGFRPASSRGPLWILGDVFMGVYH 706
            L G       GPLWILGDVF+G Y+
Sbjct:  356 LMGLEIPPPAGPLWILGDVFIGQYY 380          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.959e-15
Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 3
Query:   24 YWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIGGEG 179
            YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG  G
Sbjct:  163 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGANG 214          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: CARDH_CYNCA (Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 3
Query:   24 YWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 170
            YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:  149 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 197          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 3
Query:   24 YWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 170
            YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:  149 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 197          
BLAST of FC868700 vs. ExPASy Swiss-Prot
Match: CARDE_CYNCA (Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.722e-15
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 3
Query:   24 YWQFNLGDILIGNQSTGVCEGGCAAIVDSGTSLLAGPTPVVTEINHAIG 170
            YWQF +GD+LIG++STG C  GC A  DSGTSLL+GPT +VT+INHAIG
Sbjct:  107 YWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 155          
The following BLAST results are available for this feature:
BLAST of FC868700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
ASPR_CUCPE9.148e-8562.39Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPRX_ORYSJ3.459e-8160.00Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
ASPR_HORVU2.898e-8059.17Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR1_ORYSJ6.429e-8060.18Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
CYPR1_CYNCA2.884e-7153.24Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
CATD_CLUHA1.133e-1543.55Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CARDF_CYNCA1.959e-1567.31Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDH_CYNCA9.722e-1569.39Cardosin-H (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDG_CYNCA9.722e-1569.39Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]
CARDE_CYNCA9.722e-1569.39Cardosin-E (Fragments) OS=Cynara cardunculus PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC31003F09EF AbioticL1 Citrus clementina cDNA clone C31003F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868700 ID=FC868700; Name=FC868700; organism=Citrus clementina; type=EST; length=706bp
TATGTTCCTGTTTCAAAAAAGGCTACTGGCAGTTCAATTTGGGAGATATA
TTAATTGGGAATCAGTCCACAGGTGTTTGTGAGGGTGGTTGTGCTGCCAT
TGTGGACTCAGGAACATCCTTACTAGCCGGTCCAACACCTGTTGTGACTG
AAATCAATCATGCCATTGGTGGTGAAGGAGTTGTTAGTGCGGAGTGTAAG
CTAGTTGTTTCCCAGTATGGGGATTTAATATGGGATCTCTTAGTATCAGG
GCTACTACCTGAGAAAGTATGTCAGCAGATTGGTTTATGTGCTTTCAATG
GCGCTGAATATGTGAGTACTGGGATCAAGACCGTGGTTGAGAAGGAAAAC
GTATCAGCCGGGGATAGTGCTGTGTGCAGTGCTTGTGAAATGACCGTGGT
TTGGGTCCAGAATCAGCTAAAACAAAAGCAAACAAAGGAGAAAGTACTCA
GTTATATAAATGAGCTCTGCGACAGCCTGCCAAATCCGATGGGAGAATCA
ATTATTGACTGTGGTCGCATTCCAACCATGCCAAATGTTTCATTCACCAT
CGGAGACAAAATTTTCAACCTCTCTCCAGAGCAGTATATTCTGAAAACCG
GAGAAGGGATTGCAGAAGTCTGCATCAGTGGCTTCATGGCTTTCGACCTG
CCTCCTCCAGGGGTCCTCTGTGGATTCTGGGAGATGTATTCATGGGGGTT
TATCAC
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