FC868711
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB7G_ARATH (ABC transporter G family member 7 OS=Arabidopsis thaliana GN=ABCG7 PE=1 SV=1) HSP 1 Score: 294.278 bits (752), Expect = 4.477e-79 Identity = 157/213 (73.71%), Postives = 173/213 (81.22%), Query Frame = 2 Query: 86 MVNFGGNKVGQVVAGIGGNGVGQVLAAVAVSLLFRLFTGPGPALVTDDDSAYGDDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGLVS 724 M FGG + VV+GIGGNGVG LAAVA +LL RLF GPG AL+ +D++ +D+ + + GD + PVTIRW+NITCSLSDKSSKSVRFLL NVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQL SPRLHLSGLLEVNGKPSS+KAYK A+VRQEDLFFSQLTVRETLS AAELQLPEI S EERDEYVN+LL KLGLVS Sbjct: 1 MAPFGGKSLADVVSGIGGNGVGGALAAVAAALLVRLFAGPGIALLPEDEA----EDDYAETEDGGGDS-------IRPVTIRWRNITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLSLSPRLHLSGLLEVNGKPSSSKAYKLAFVRQEDLFFSQLTVRETLSFAAELQLPEISSAEERDEYVNNLLLKLGLVS 202
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB27G_ARATH (ABC transporter G family member 27 OS=Arabidopsis thaliana GN=ABCG27 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.484e-23 Identity = 67/189 (35.45%), Postives = 110/189 (58.20%), Query Frame = 2 Query: 161 AAVAVSLLFRLFTGPGPALVTDDDSAYGDDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDK--SSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 A++ +S F FT P ++ + + +DD D+ A FP+ +++ +IT ++ K +S S + +LN +SG A PG LLA+MGPSGSGKTTLLN L G+ + ++ G + N KP S + + +V Q+D+ F LTV+ETL+ A L+LP+ L+ +E+++ S++ +LGL Sbjct: 92 ASLGLSFSFTGFTVPHEEIIASERCS--NDDILEDIEAATSSVVKFQAEPTFPIYLKFIDITYKVTTKGMTSSSEKSILNGISGSAYPGELLALMGPSGSGKTTLLNALGGRF---NQQNIGGSVSYNDKPYSKHLKTRIGFVTQDDVLFPHLTVKETLTYTALLRLPKTLTEQEKEQRAASVIQELGL 275
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB15G_ARATH (ABC transporter G family member 15 OS=Arabidopsis thaliana GN=ABCG15 PE=2 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 5.563e-21 Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 326 IRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 + W+++T + + S R LL ++G A+PGR++AIMGPSGSGK+TLL+ LAG+L + + ++G L +NGK + AYV QED+ LTVRET++ +A L+LP +S EE + V + +LGL Sbjct: 25 LAWEDLTVVIPNFSDGPTRRLLQRLNGYAEPGRIMAIMGPSGSGKSTLLDSLAGRL--ARNVVMTGNLLLNGKKARLDYGLVAYVTQEDVLLGTLTVRETITYSAHLRLPSDMSKEEVSDIVEGTIMELGL 153
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20 Identity = 55/131 (41.98%), Postives = 86/131 (65.65%), Query Frame = 2 Query: 326 IRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 + W+++T + + S R LL+ ++G A+PGR++AIMGPSGSGK+TLL+ LAG+L + + ++G L +NGK + AYV QED+ LTVRET++ +A L+L L+ EE ++ V + +LGL Sbjct: 24 LAWEDLTVVIPNFSGGPTRRLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRL--ARNVIMTGNLLLNGKKARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGL 152
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB13G_ARATH (ABC transporter G family member 13 OS=Arabidopsis thaliana GN=ABCG13 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.709e-20 Identity = 55/131 (41.98%), Postives = 83/131 (63.36%), Query Frame = 2 Query: 326 IRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 + W+++T + + + + LLN V+G +P R+LAIMGPSGSGK+TLL+ LAG+L + + +SG + VNGK AYV QED+ LTVRE++S +A L+LP L+ EE + V + + +GL Sbjct: 10 VAWEDLTVVIPNFGEGATKRLLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRLAGN--VVMSGKVLVNGKKRRLDFGAAAYVTQEDVLLGTLTVRESISYSAHLRLPSKLTREEISDIVEATITDMGL 138
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana GN=ABCG21 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.370e-19 Identity = 61/170 (35.88%), Postives = 95/170 (55.88%), Query Frame = 2 Query: 245 DDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDKSSKSV-----------RFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 DDD +D + + + P+ ++++ +T S+ ++ K R +L VSG KPG LLA++GPSGSGKTTL+ LAG+L LSG + NG+P +S+ K +V Q+D+ + LTV ETL+ A L+LP+ L+ +E+ E V ++ LGL Sbjct: 41 DDDNDHDGPSHQSRQSSVLRQSLRPIILKFEELTYSIKSQTGKGSYWFGSQEPKPNRLVLKCVSGIVKPGELLAMLGPSGSGKTTLVTALAGRLQGK----LSGTVSYNGEPFTSSVKRKTGFVTQDDVLYPHLTVMETLTYTALLRLPKELTRKEKLEQVEMVVSDLGL 206
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB22G_ARATH (ABC transporter G family member 22 OS=Arabidopsis thaliana GN=ABCG22 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19 Identity = 63/189 (33.33%), Postives = 103/189 (54.50%), Query Frame = 2 Query: 161 AAVAVSLLFRLFTGPGPALVTDDDSAYGDDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDK--SSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGL 718 A++ +S F F P + D + DD+ + EA P+ ++++++T + K +S + +L +SG PG +LA+MGPSGSGKTTLL++LAG++ S G + N KP S K +V Q+D+ F LTV+ETL+ AA L+LP+ L+ E++ + ++ +LGL Sbjct: 104 ASLGLSFSFTGFAMPPEEI--SDSKPFSDDEMIPEDIEAGKKKPKFQAEPTLPIFLKFRDVTYKVVIKKLTSSVEKEILTGISGSVNPGEVLALMGPSGSGKTTLLSLLAGRISQS---STGGSVTYNDKPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGL 287
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB17G_ARATH (ABC transporter G family member 17 OS=Arabidopsis thaliana GN=ABCG17 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19 Identity = 53/122 (43.44%), Postives = 77/122 (63.11%), Query Frame = 2 Query: 365 SSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKPSSNKAYKF--AYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGLVS 724 S ++ LLN ++GEAK G +LAI+G SG+GK+TL++ LAGQ+ L G + +NG+ ++ + AYV QEDL F LTV ETL AAE +LP LS ++ V +L+ +LGL + Sbjct: 44 SPAKIKTLLNGITGEAKEGEILAILGASGAGKSTLIDALAGQIAEG---SLKGTVTLNGEALQSRLLRVISAYVMQEDLLFPMLTVEETLMFAAEFRLPRSLSKSKKRNRVETLIDQLGLTT 162
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: PDH1_CANGA (ATP-binding cassette transporter CGR1 OS=Candida glabrata GN=PDH1 PE=3 SV=3) HSP 1 Score: 90.5077 bits (223), Expect = 9.819e-18 Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = 2 Query: 239 YGDDDERNDVAEANGDGEAPVDGKVFPVTIRWQNITCSLSDKSSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGKP-SSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLL 703 Y ++ + + + G V WQN+ + K+ VR +LNNV G KPG L A+MG SG+GKTTLL+ LA + ++G + VNG+P ++ + Y +Q+DL TVRE+L +A L+ P +S+EE++EYV +++ Sbjct: 856 YDENADSESITSGSRGGSPQVGLSKSEAIFHWQNLCYDVPIKTE--VRRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLAERTTMGV---ITGDVMVNGRPRDTSFSRSIGYCQQQDLHLKTATVRESLRFSAYLRQPSSVSIEEKNEYVEAVI 1006
BLAST of FC868711 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17 Identity = 52/122 (42.62%), Postives = 78/122 (63.93%), Query Frame = 2 Query: 365 SSKSVRFLLNNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLMASPRLHLSGLLEVNGK--PSSNKAYKFAYVRQEDLFFSQLTVRETLSLAAELQLPEILSVEERDEYVNSLLFKLGLVS 724 SS + + LLN +SGEA+ G ++A++G SGSGK+TL++ LA ++ L G + +NG+ SS + AYV Q+DL F LTV ETL +AE +LP LS +++ V +L+ +LGL S Sbjct: 126 SSVNTKILLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKD---SLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRS 244 The following BLAST results are available for this feature:
BLAST of FC868711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868711 ID=FC868711; Name=FC868711; organism=Citrus clementina; type=EST; length=725bpback to top |