FC868787

Overview
NameFC868787
Unique NameFC868787
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length717
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9399 contig Ccv1_Contig9399:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.895e-62
Identity = 114/190 (60.00%), Postives = 133/190 (70.00%), Query Frame = 1
Query:  130 EEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            E+EH  KA GWAARDSSG LSPF F RRETG++DV  KVLYCGICH+DL  +KNEWGFS +P+VPGHEI GEVTE                     +C SCE+C + LENYCPK ILTY +   DG+ TYGGYSD MVA+E +IVR PD++PLD AAPLLCAGIT YSPL+YFGL +       + L GL
Sbjct:    4 EQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGL 193          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.412e-61
Identity = 109/195 (55.90%), Postives = 137/195 (70.26%), Query Frame = 1
Query:  115 MAKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            MAKS E E P+KAFGWAARD+SG LSPF FSRRE GD+DV +K+LYCG+CH+DL  +KN+WGF+ +P+VPGHEI G VT+                     +C +CE+C  DLE YCPK + TY+S    GT TYGGYSD +V ++RY+V+FPD++PLDA APLLCAGITVYSP+KY+G+ E         L GL
Sbjct:    1 MAKSPETELPLKAFGWAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNS-PYKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGL 194          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.412e-61
Identity = 109/192 (56.77%), Postives = 137/192 (71.35%), Query Frame = 1
Query:  124 SREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            S E+E  V+AFGWAARDSSGHLSPF FSRR+TG+E+VR+KVLYCGICH+DL  +KNEW  S++P+VPGHEI GEV+E                     +C +CESC  D ENYC K I TY+ ++ DGTI YGGYSDH+V +ERY V+ P ++PL +AAPLLCAGI++YSP+KYFGL   +     + L GL
Sbjct:    5 SGEKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGL 196          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.206e-60
Identity = 116/196 (59.18%), Postives = 132/196 (67.35%), Query Frame = 1
Query:  115 MAKSREEE-HPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            MA S  E  HP KAFGWAARD+SG LSP KFSRR TG++DV  KVLYCGICH+DL  IKNEWG +++P +PGHEI G VTE                     +C SCESC N LENYCPKMILTY S   DGT+TYGGYSD MV  E + VR PD+M LDA APLLCAG+TVYSPLK+F L +       + L GL
Sbjct:    1 MANSAPENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGL 196          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.206e-60
Identity = 104/195 (53.33%), Postives = 135/195 (69.23%), Query Frame = 1
Query:  115 MAKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            MAKS E EHP K FGW ARD SG LSPF FSRR+ G+ DV +K+L+CG+CHTDL  IKN+WG+S +P+VPGHEI G  T+                     +C SCESC  DLENYCP+M  TY++I +DGT  YGGYS+++V ++R+++RFP+++P D+ APLLCAGITVYSP+KY+G+ E         L GL
Sbjct:    1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGL 195          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 5.447e-60
Identity = 107/180 (59.44%), Postives = 127/180 (70.56%), Query Frame = 1
Query:  115 MAKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGL 654
            MAKS E EHPVKA GWAA D+SG  SPF FSRR TG+ DV+ +VLYCG+CH+DL  +KNEWG + +P+VPGHEI G VTE                     +C  C+ C+NDLENYC K ILTY +   DGTI  GGYSD MVA+E +I+R+P++ PLDA APLLCAGIT YSPLKYFGL
Sbjct:    1 MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNEWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGL 180          

HSP 2 Score: 22.7126 bits (47), Expect = 5.447e-60
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  657 RTGKHVGIVGLGGLG 701
            + G  VG+ GLGGLG
Sbjct:  182 KPGLRVGVNGLGGLG 196          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 7.815e-60
Identity = 110/195 (56.41%), Postives = 138/195 (70.77%), Query Frame = 1
Query:  115 MAKSREEEHPVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            MAKS E EHPVKAFGWAARD++G LSPFKFSRR TG++DVRLKVL+CG+CH+D   I N WGF+ +P+VPGHEI G VTE                     +C SCESC ++ E++C   I TY SI  DGT+T+GGYSD MVA+E +I+R+P ++PLD+ APLLCAGIT YSPLKY+GL +  +    + L GL
Sbjct:    1 MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGL 195          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.741e-57
Identity = 104/186 (55.91%), Postives = 128/186 (68.82%), Query Frame = 1
Query:  142 PVKAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            P  A G AARD+SGHLSP   SRR TGD+DV +K+LYCGICH+DL +IKNEW  + +P+VPGHEIAG VTE                     +CHSC+SC   LEN+CP +I TY+S++ DGT+TYGGYS  +V +ER++VRFP++MPLD  APLLCAGITVYSP+KY GL         L L GL
Sbjct:    3 PTAAAGLAARDASGHLSPLTISRRSTGDDDVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGL 188          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.379e-56
Identity = 104/184 (56.52%), Postives = 126/184 (68.48%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            +AFG AA+D+SG LSPF F+RRETG++DVR KVL+CGICH+DL  +KNEWG S +P+VPGHEI G VTE                     +C SC+SC   +ENYCPK I TY     D TITYGGYSDHMV  E +++R PD++PLDAAAPLLCAGITVYSP+KY GL +       + L GL
Sbjct:    8 EAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGL 191          
BLAST of FC868787 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.073e-56
Identity = 102/184 (55.43%), Postives = 127/184 (69.02%), Query Frame = 1
Query:  148 KAFGWAARDSSGHLSPFKFSRRETGDEDVRLKVLYCGICHTDLSNIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITYGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLAEQESM*ASLALAGL 699
            +A G AARDSSGHLSPF  SRR TGD+DV +K+L+CGICH+DL  IKNEW  S++P+VPGHEIAG VTE                     +C SCESC N  EN+CP+ + TY+S++ DGT+TYGGYS  +V +ER++V FP++MPLD  APLLCAGITVY+P+KY GL         L L GL
Sbjct:   15 QAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGL 198          
The following BLAST results are available for this feature:
BLAST of FC868787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
MTDH_FRAAN4.895e-6260.00Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MEDSA5.412e-6155.90Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH6_ARATH5.412e-6156.77Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
MTDH_MESCR1.206e-6059.18Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH9_ARATH1.206e-6053.33Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
GEDH1_OCIBA5.447e-6059.44Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_APIGR7.815e-6056.41Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH5_ORYSJ4.741e-5755.91Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH8_ARATH1.379e-5656.52Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH3_ORYSJ3.073e-5655.43Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionC31004G07EF AbioticL1 Citrus clementina cDNA clone C31004G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868787 ID=FC868787; Name=FC868787; organism=Citrus clementina; type=EST; length=717bp
TGTACACACATGAATATTCATATGAAACAAAAACAAAAACAGGTACTTTC
ACTCGTCTCATCACGTCGTTCAAACCACTATAATAATGATAACATTGCCG
TTCTCTCATCCAAAATGGCAAAATCACGAGAAGAAGAACATCCAGTAAAG
GCCTTTGGGTGGGCAGCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAA
ATTCTCCAGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGT
ATTGTGGGATCTGCCATACTGATCTCTCCAACATCAAGAATGAATGGGGC
TTCTCTCTCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGAC
AGAAGTTGGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAG
TTGGATGCATGGTCGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGAC
CTTGAAAATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACAC
TGACGGAACAATCACATACGGAGGCTACTCTGATCACATGGTTGCCAATG
AGCGCTACATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCC
CCCCTGCTTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGG
ACTAGCAGAACAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGG
TCAGTCGCTGTCAAATT
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