FC868832
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCA_ARATH (Chloride channel protein CLC-a OS=Arabidopsis thaliana GN=CLC-A PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 5.064e-82 Identity = 96/128 (75.00%), Postives = 109/128 (85.16%), Query Frame = 1 Query: 91 MEENSNPVARATQAHMEADEEERDPESNSLQQPLLKRSRTLSSSPLALVGAKVSHIESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEKD 474 M+E+ N + + ++ +EE DPE+N+L QPLLKR RTLSS+PLALVGAKVSHIESLDYEINENDLFKHDWRSRSK QV QYIFLKW+LACLVGL TGLIATLINLAVENIAGYKLLAV +I +D Sbjct: 1 MDEDGN--LQISNSNYNGEEEGEDPENNTLNQPLLKRHRTLSSTPLALVGAKVSHIESLDYEINENDLFKHDWRSRSKAQVFQYIFLKWTLACLVGLFTGLIATLINLAVENIAGYKLLAVGYYIAQD 126 HSP 2 Score: 136.732 bits (343), Expect = 5.064e-82 Identity = 64/70 (91.43%), Postives = 68/70 (97.14%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXGGPDNHRI 685 AGPGIPEIKAYLNG+DTPNMFG TT++VKI+GSIGAVAAGLDLGKEGPLVHIGSCIASLLG GGPDNHRI Sbjct: 158 AGPGIPEIKAYLNGIDTPNMFGFTTMMVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRI 227
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCB_ARATH (Chloride channel protein CLC-b OS=Arabidopsis thaliana GN=CLC-B PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 1.029e-79 Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 1 Query: 151 EERDPESNSLQQPLLKRSRTLSSSPLALVGAKVSHIESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEKDSW 480 E DPESN+L QPL+K +RTLSS+PLALVGAKVSHIESLDYEINENDLFKHDWR RSK QVLQY+FLKW+LACLVGL TGLIATLINLAVENIAGYKLLAV F+ ++ + Sbjct: 18 EGGDPESNTLNQPLVKANRTLSSTPLALVGAKVSHIESLDYEINENDLFKHDWRKRSKAQVLQYVFLKWTLACLVGLFTGLIATLINLAVENIAGYKLLAVGHFLTQERY 127 HSP 2 Score: 137.502 bits (345), Expect = 1.029e-79 Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXGGPDNHRI 685 AGPGIPEIKAYLNGVDTPNMFGATT+IVKI+GSIGAVAAGLDLGKEGPLVHIGSCIASLLG GG DNHRI Sbjct: 157 AGPGIPEIKAYLNGVDTPNMFGATTMIVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGTDNHRI 226
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCC_ARATH (Chloride channel protein CLC-c OS=Arabidopsis thaliana GN=CLC-C PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 5.062e-48 Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 160 DPESNSLQQPLLKRSRTLSSSPLALVGAKVSHIESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEKDSW 480 D S +QPLL R+R ++S +A+VGA IESLDYEI END FK DWRSR K+++LQY FLKW+LA L+GL TGL+ L NL VENIAG+KLL + + + K+ + Sbjct: 31 DDGSVGFRQPLLARNRKNTTSQIAIVGANTCPIESLDYEIFENDFFKQDWRSRKKIEILQYTFLKWALAFLIGLATGLVGFLNNLGVENIAGFKLLLIGNLMLKEKY 137 HSP 2 Score: 90.1225 bits (222), Expect = 5.062e-48 Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXGGPDNHRI 685 AG GIPE+KAYLNG+D ++ +TL VKI GSI VAAG +GKEGP+VH G+CIA+LLG GG +R+ Sbjct: 167 AGSGIPEVKAYLNGIDAYSILAPSTLFVKIFGSIFGVAAGFVVGKEGPMVHTGACIANLLGQGGSKKYRL 236
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCG_ARATH (Putative chloride channel-like protein CLC-g OS=Arabidopsis thaliana GN=At5g33280 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 5.820e-43 Identity = 51/94 (54.26%), Postives = 65/94 (69.15%), Query Frame = 1 Query: 172 NSLQQPLLK--RSRTLSSSPLALVGAKVSHIESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLL 447 +S+ PLL R T S+S +A+VGA V IESLDYEI END FK DWR RSKV++ QY+F+KW L +G++ LI NLAVEN+AG K + Sbjct: 8 DSVAVPLLPSLRRATNSTSQVAIVGANVCPIESLDYEIAENDFFKQDWRGRSKVEIFQYVFMKWLLCFCIGIIVSLIGFANNLAVENLAGVKFV 101 HSP 2 Score: 95.5153 bits (236), Expect = 5.820e-43 Identity = 43/70 (61.43%), Postives = 55/70 (78.57%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXGGPDNHRI 685 AG GIPE+KAYLNGVD P +F TLI+KIIG+I AV+A L +GK GP+VH G+C+AS+LG GG +R+ Sbjct: 142 AGSGIPEVKAYLNGVDAPEIFSLRTLIIKIIGNISAVSASLLIGKAGPMVHTGACVASILGQGGSKRYRL 211
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCD_ARATH (Chloride channel protein CLC-d OS=Arabidopsis thaliana GN=CLC-D PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 8.014e-32 Identity = 46/71 (64.79%), Postives = 51/71 (71.83%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXGGPDNHRIN 688 AG GIPEIK YLNG+D P TLI KI GSIG+V GL LGKEGPLVH G+CIASLLG GG + +N Sbjct: 147 AGSGIPEIKGYLNGIDIPGTLLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLN 217 HSP 2 Score: 64.6994 bits (156), Expect = 8.014e-32 Identity = 30/72 (41.67%), Postives = 45/72 (62.50%), Query Frame = 1 Query: 256 IESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEK 471 + SLDYE+ EN ++ + R K+ V Y+ +KW + L+G+ TGL A INL+VEN AG+K + I+K Sbjct: 44 VNSLDYEVIENYAYREEQAHRGKLYVGYYVAVKWFFSLLIGIGTGLAAVFINLSVENFAGWKFALTFAIIQK 115
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCN7_RAT (H(+)/Cl(-) exchange transporter 7 OS=Rattus norvegicus GN=Clcn7 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.609e-21 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXG 664 AG GIP+IK +LNGV P++ TL++K+ G I +V GL +GKEGP++H GS IA+ + G Sbjct: 200 AGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQG 262 HSP 2 Score: 55.0694 bits (131), Expect = 4.609e-21 Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 1 Query: 259 ESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEK 471 ESLDY+ +EN LF + R + +W + L+G+LTGL+A I++ VEN+AG K + I+K Sbjct: 93 ESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLKYRVIKDNIDK 163
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCN7_MOUSE (H(+)/Cl(-) exchange transporter 7 OS=Mus musculus GN=Clcn7 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 4.609e-21 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXG 664 AG GIP+IK +LNGV P++ TL++K+ G I +V GL +GKEGP++H GS IA+ + G Sbjct: 200 AGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQG 262 HSP 2 Score: 55.0694 bits (131), Expect = 4.609e-21 Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 1 Query: 259 ESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEK 471 ESLDY+ +EN LF + R + +W + L+G+LTGL+A I++ VEN+AG K + I+K Sbjct: 93 ESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLKYRVIKDNIDK 163
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCN7_HUMAN (H(+)/Cl(-) exchange transporter 7 OS=Homo sapiens GN=CLCN7 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 4.609e-21 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXG 664 AG GIP+IK +LNGV P++ TL++K+ G I +V GL +GKEGP++H GS IA+ + G Sbjct: 202 AGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQG 264 HSP 2 Score: 55.0694 bits (131), Expect = 4.609e-21 Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 1 Query: 259 ESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEK 471 ESLDY+ +EN LF + R + +W + L+G+LTGL+A I++ VEN+AG K + I+K Sbjct: 95 ESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICALIGILTGLVACFIDIVVENLAGLKYRVIKGNIDK 165
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCN7_BOVIN (H(+)/Cl(-) exchange transporter 7 OS=Bos taurus GN=CLCN7 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.384e-20 Identity = 31/63 (49.21%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLGXG 664 AG GIP+IK +LNGV P++ TL++K+ G I +V GL +GKEGP++H GS IA+ + G Sbjct: 206 AGSGIPQIKCFLNGVKIPHVVRLKTLVIKVSGVILSVVGGLAVGKEGPMIHSGSVIAAGISQG 268 HSP 2 Score: 51.2174 bits (121), Expect = 6.384e-20 Identity = 26/71 (36.62%), Postives = 40/71 (56.34%), Query Frame = 1 Query: 259 ESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEK 471 ESLDY+ +EN LF + R + +W + +VG+LTGL+A I++ VE +AG K V I++ Sbjct: 99 ESLDYDNSENQLFLEEERRINHTAFRTVEIKRWVICAMVGILTGLVACFIDIVVEKLAGLKYRLVKDNIDR 169
BLAST of FC868832 vs. ExPASy Swiss-Prot
Match: CLCA_DICDI (Chloride channel protein A OS=Dictyostelium discoideum GN=clcA PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 2.674e-17 Identity = 28/61 (45.90%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 476 AGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVAAGLDLGKEGPLVHIGSCIASLLG 658 +G GIPE+K YLNG+ P TL+ K++ I A ++GL LG EGP++HIGS + +G Sbjct: 199 SGSGIPEVKGYLNGIRIPQSMNVKTLVGKLVSLILAYSSGLILGPEGPMIHIGSMLGGAIG 259 HSP 2 Score: 45.0542 bits (105), Expect = 2.674e-17 Identity = 22/77 (28.57%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 244 KVSHIESLDYEINENDLFKHDWRSRSKVQVLQYIFLKWSLACLVGLLTGLIATLINLAVENIAGYKLLAVVSFIEKD 474 K++ ESLD+ I +N +++ R SK+ + F KW + ++G+L G+ A L+ +VE + +K ++E + Sbjct: 91 KMTKFESLDFPIIDNQIYREYIRRTSKLNHMLKTFGKWIICFMIGVLVGITAYLVKQSVEFVNEFKFDQSGKYLEDE 167 The following BLAST results are available for this feature:
BLAST of FC868832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868832 ID=FC868832; Name=FC868832; organism=Citrus clementina; type=EST; length=690bpback to top |