FC868836
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_SOYBN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Glycine max GN=PDS1 PE=2 SV=1) HSP 1 Score: 379.022 bits (972), Expect = 1.344e-104 Identity = 186/227 (81.94%), Postives = 205/227 (90.31%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EKVKFAIGLLPA++GGQ YVEAQDGL+VQEWM+KQ GVP+RV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV++IQSLGGEV LNSR+QKIELNDDGTVK+FLL NG V++GDAYVFATPVDILKL LP+NWK + YF+RL+KLVGVPVIN+HIWFDRKLKNTYDHLLFSRSPLLSVYADMS+ EYY+P Sbjct: 223 EKVKFAIGLLPAMLGGQPYVEAQDGLSVQEWMKKQ----------GVPERVADEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDYIQSLGGEVHLNSRIQKIELNDDGTVKSFLLNNGKVMEGDAYVFATPVDILKLLLPDNWKGIPYFQRLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSPLLSVYADMSVTCKEYYSP 439
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_ARATH (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=PDS PE=2 SV=1) HSP 1 Score: 376.326 bits (965), Expect = 8.713e-104 Identity = 183/227 (80.62%), Postives = 205/227 (90.31%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EK+KFAIGLLPA++GGQAYVEAQDGL+V+EWM KQ GVP+RVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+P+V+HI+SLGGEV+LNSR++KIELNDDGTVK+FLLTNG+ ++GDAYVFA PVDILKL LP+ WKE+ YFK+L+KLVGVPVIN+HIWFDRKLKNTYDHLLFSRS LLSVYADMSL EYY P Sbjct: 217 EKIKFAIGLLPAMVGGQAYVEAQDGLSVKEWMEKQ----------GVPERVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPVVDHIRSLGGEVQLNSRIKKIELNDDGTVKSFLLTNGSTVEGDAYVFAAPVDILKLLLPDPWKEIPYFKKLDKLVGVPVINVHIWFDRKLKNTYDHLLFSRSNLLSVYADMSLTCKEYYDP 433
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSJ (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. japonica GN=PDS PE=2 SV=2) HSP 1 Score: 373.244 bits (957), Expect = 7.376e-103 Identity = 183/227 (80.62%), Postives = 201/227 (88.55%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EKVKFA+GLLPA++GGQAYVEAQDG TV EWM+KQ GVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+QKIELN DGTVK+F LT+G I GDAYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRS LLSVYADMS+ EYY P Sbjct: 229 EKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQ----------GVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDP 445
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_ORYSI (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Oryza sativa subsp. indica GN=PDS1 PE=2 SV=2) HSP 1 Score: 373.244 bits (957), Expect = 7.376e-103 Identity = 183/227 (80.62%), Postives = 201/227 (88.55%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EKVKFA+GLLPA++GGQAYVEAQDG TV EWM+KQ GVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+H++SLGGEVRLNSR+QKIELN DGTVK+F LT+G I GDAYVFATPVDILKL +P+ WKE++YFK+LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRS LLSVYADMS+ EYY P Sbjct: 229 EKVKFALGLLPAMVGGQAYVEAQDGFTVSEWMKKQ----------GVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHVRSLGGEVRLNSRIQKIELNPDGTVKHFALTDGTQITGDAYVFATPVDILKLLVPQEWKEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYDP 445
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 2.373e-101 Identity = 178/227 (78.41%), Postives = 205/227 (90.31%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EKVKFAIGLLPA++GGQ+YVEAQDG++V++WMRKQ GVPDRVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++KIELN+DG+VK+F+L++G+ I+GDA+VFA PVDI KL LPE+WKE+ YF++LEKLVGVPVIN+HIWFDRKLKNTYDHLLFSRS LLSVYADMS+ EYY P Sbjct: 236 EKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQ----------GVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKSFILSDGSAIEGDAFVFAAPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSLLSVYADMSVTCKEYYNP 452
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_NARPS (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=PDS1 PE=1 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 2.373e-101 Identity = 180/227 (79.30%), Postives = 200/227 (88.11%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EKV+FAIGLLPA++GGQAYVEAQDGLTV EWMR+Q GVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+HIQSLGG +LNSR+QKIELN DGTVK+F+L NGN+I GDAYV A PVDILKL LP+ W+E+ YF++L+KLVGVPVIN+HIWFDRKLKNTYDHLLF+RSPLLSVYADMS+ EYY P Sbjct: 222 EKVRFAIGLLPAMVGGQAYVEAQDGLTVTEWMRRQ----------GVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIQSLGGRAQLNSRLQKIELNPDGTVKHFVLGNGNIITGDAYVVAAPVDILKLLLPQEWREIPYFQKLDKLVGVPVINVHIWFDRKLKNTYDHLLFTRSPLLSVYADMSVTCKEYYDP 438
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_CAPAN (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Capsicum annuum GN=PDS PE=2 SV=1) HSP 1 Score: 364.77 bits (935), Expect = 2.623e-100 Identity = 178/227 (78.41%), Postives = 204/227 (89.87%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EKVKFAIGLLPA++GGQ+YVEAQDG++V++WMRKQ GVPDRVT EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIVEHI+S GG+VRLNSR++KIELN+DG+VK F+L +G+ I+GDA+VFATPVDI KL LPE+WKE+ YF++LEKLVGVPVIN+HIWFDRKLKNT D+LLFSRSPLLSVYADMS+ EYY P Sbjct: 235 EKVKFAIGLLPAMLGGQSYVEAQDGISVKDWMRKQ----------GVPDRVTDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVEHIESKGGQVRLNSRIKKIELNEDGSVKCFILNDGSTIEGDAFVFATPVDIFKLLLPEDWKEIPYFQKLEKLVGVPVINVHIWFDRKLKNTSDNLLFSRSPLLSVYADMSVTCKEYYDP 451
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_MAIZE (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Zea mays GN=PDS1 PE=2 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 8.439e-99 Identity = 178/227 (78.41%), Postives = 195/227 (85.90%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTNGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EKVKFAIGLLPA++GGQ YVEAQDGLTV EWM+KQ GVPDRV EVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLC+PIV+HI+S GGEVRLNSR++KIELN DGTVK+F L++G I GDAYV ATPVDI KL +P+ W E+ YFK+LEKLVGVPVIN+HIWFDRKL NTYDHLLFSRS LLSVYADMS+ EYY P Sbjct: 221 EKVKFAIGLLPAMVGGQPYVEAQDGLTVSEWMKKQ----------GVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRIKKIELNPDGTVKHFALSDGTQITGDAYVCATPVDIFKLLVPQEWSEITYFKKLEKLVGVPVINVHIWFDRKLNNTYDHLLFSRSSLLSVYADMSVTCKEYYDP 437
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_SYNE7 (Phytoene dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=pds PE=3 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 1.189e-68 Identity = 137/232 (59.05%), Postives = 167/232 (71.98%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLT-----NGNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EK+KF +GLLPA+I GQ+YVE D + EW+RKQ +P+RV EVFIAM+KALNFI+PDE+S +L ALNRFLQEK GS MAFLDG PPERLC PIVEH+Q+ GG+V LN+ +++ LNDD +V+ F + +I+ DAYV A PVD LKL LP+ WK M YF++L+ L GVPVINIH+WFDRKL + DHLLFSRSPLLSVYADMS EY P Sbjct: 124 EKIKFGLGLLPAMIRGQSYVEEMDQYSWTEWLRKQ----------NIPERVNDEVFIAMAKALNFIDPDEISATVVLTALNRFLQEKKGSMMAFLDGAPPERLCQPIVEHVQARGGDVLLNAPLKEFVLNDDSSVQAFRIAGIKGQEEQLIEADAYVSALPVDPLKLLLPDAWKAMPYFQQLDGLQGVPVINIHLWFDRKLTD-IDHLLFSRSPLLSVYADMSNTCREYEDP 344
BLAST of FC868836 vs. ExPASy Swiss-Prot
Match: CRTI_SYNY3 (Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=pds PE=3 SV=2) HSP 1 Score: 251.521 bits (641), Expect = 3.237e-66 Identity = 132/232 (56.90%), Postives = 162/232 (69.83%), Query Frame = 2 Query: 2 EKVKFAIGLLPAIIGGQAYVEAQDGLTVQEWMRKQVQPSDLVRELGVPDRVTTEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGSKMAFLDGNPPERLCLPIVEHIQSLGGEVRLNSRVQKIELNDDGTVKNFLLTN-----GNVIDGDAYVFATPVDILKLQLPENWKEMAYFKRLEKLVGVPVINIHIWFDRKLKNTYDHLLFSRSPLLSVYADMSLNL*EYYTP 682 EK++F +GLLPAI+ GQ+YVE D T EWM KQ +P R+ EVFIAMSKALNFI+PDE+S +L ALNRFLQEK+GSKMAFLDG PPERLC P+V++I GGEV +N +++I LN+DG+VK +L+ VI D YV A PVD LK +P W+E FK+++ L GVPVIN+H+WFDRKL + DHLLFSRSPLLSVYADMS EY P Sbjct: 124 EKIRFGLGLLPAIVQGQSYVEEMDKYTWSEWMAKQ----------NIPPRIEKEVFIAMSKALNFIDPDEISATILLTALNRFLQEKNGSKMAFLDGAPPERLCQPLVDYITERGGEVHINKPLKEILLNEDGSVKGYLIRGLDGAPDEVITADLYVSAMPVDPLKTMVPAPWREYPEFKQIQGLEGVPVINLHLWFDRKLTD-IDHLLFSRSPLLSVYADMSNTCREYSDP 344 The following BLAST results are available for this feature:
BLAST of FC868836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868836 ID=FC868836; Name=FC868836; organism=Citrus clementina; type=EST; length=710bpback to top |