FC868880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: Y4372_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g37250 OS=Arabidopsis thaliana GN=At4g37250 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.706e-15 Identity = 45/163 (27.61%), Postives = 82/163 (50.31%), Query Frame = 3 Query: 129 SNNITTDQQALLALKDHIIYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIP 617 S+ + +D L+ K ++ DP +LL + S C+W GI+C+ N +V L + L G+IP G +P S + L+FLD + N +SG + S + ++ +++ + L++N +G+LP N+ + L +L + L+ N F +IP Sbjct: 19 SSALNSDGLVLMKFKSSVLVDPLSLLQTWNYKHESPCSWRGISCN-NDSKVLTLSLPNSQLLGSIPSDLGSLLTLQSLDLSNNSFNGPLPVSFFNARELRFLDLSSNMISGEIPSAIGDLHNLLTLNLSDNALAGKLPTNLAS-LRNLTVVSLENNYFSGEIP 179
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.758e-15 Identity = 49/175 (28.00%), Postives = 79/175 (45.14%), Query Frame = 3 Query: 144 TDQQALLALKDHIIYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIPSALSKCQQPATLNLQFN 668 TD+QALL K + D +L+ +W + +C W G+TC + RV L++ + L G I P G +P + + L++LD N L G + ++N S ++ +RL +NR G +P + L +L L L N K+P++L L L N Sbjct: 24 TDRQALLQFKSQVSEDKRVVLS-SWNHSFPLCNWKGVTCGRKNKRVTHLELGRLQLGGVISPSIGNLSFLVSLDLYENFFGGTIPQEVGQLSRLEYLDMGINYLRGPIPLGLYNCSRLLNLRLDSNRLGGSVPSEL-GSLTNLVQLNLYGNNMRGKLPTSLGNLTLLEQLALSHN 196
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: Y5659_ARATH (Probable inactive receptor kinase At5g16590 OS=Arabidopsis thaliana GN=At5g16590 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.677e-14 Identity = 53/180 (29.44%), Postives = 79/180 (43.89%), Query Frame = 3 Query: 129 SNNITTDQQALLALKDHIIYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIPSALSKCQQPATLNLQFN 668 ++++ D++AL+AL+D + P LL W CTW G+ C+ S RV AL + L G +P G +P + L++L N SG + SF+F + +I+ I L N F G +P N+ N L L+L N IP K QQ + Q N Sbjct: 22 TSDLEADRRALIALRDGVHGRP--LL---WNLTAPPCTWGGVQCE--SGRVTALRLPGVGLSGPLPIAIGNLTKLETLSFRFNALNGPLPPDFANLTLLRYLYLQGNAFSGEIPSFLFTLPNIIRINLAQNNFLGRIPDNV-NSATRLATLYLQDNQLTGPIPEIKIKLQQFNVSSNQLN 193
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.677e-14 Identity = 45/178 (25.28%), Postives = 88/178 (49.44%), Query Frame = 3 Query: 135 NITTDQQALLALKDHIIYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIPSALSKCQQPATLNLQFN 668 +++++ +L++ K + +P+ L + N +S+ S C W+G+TC + RV +L + +L+G IP + G +P I+ + L+ LD + N L+G + + + ++ + L++N FSG LP + LP L +L + N +IP + K + L + N Sbjct: 22 DLSSETTSLISFK-RSLENPSLLSSWNVSSSASHCDWVGVTCLLG--RVNSLSLPSLSLRGQIPKEISSLKNLRELCLAGNQFSGKIPPEIWNLKHLQTLDLSGNSLTGLLPRLLSELPQLLYLDLSDNHFSGSLPPSFFISLPALSSLDVSNNSLSGEIPPEIGKLSNLSNLYMGLN 196
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: Y1634_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana GN=At1g63430 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.157e-13 Identity = 45/159 (28.30%), Postives = 76/159 (47.80%), Query Frame = 3 Query: 141 TTDQQALLALKDHIIYDPTNLLAHNWTS-NTSVCTWIGITCDVNSHRVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKI 614 + + QAL K+ I DP L+ NW N+ C W GI C + V ++IS +++G + P+ G +P I + LK LD +N L G + + + ++S I+ I L +N +G+LP + N L +L+ L +D+N + Sbjct: 25 SNEVQALRRFKEAIYEDPL-LVMSNWNDPNSDPCDWTGIYCSPSKDHVIKINISASSIKGFLAPELGQITYLQELILHGNILIGTIPKEIGNLKNLKILDLGNNHLMGPIPAEIGSLSGIMIINLQSNGLTGKLPAELGN-LKYLRELHIDRNRLQGSL 181
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13 Identity = 45/144 (31.25%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 237 CTWIGITCDVNSHRVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIPSALSKCQQPATLNLQFN 668 C+W G+ CD + V L S +L G IP +PS ++++TLK L+ + N++SGS SS V N + + ++ N FSG +P+ + + L L+ L LD N F IP L CQ +++L N Sbjct: 55 CSWQGLFCDSKNEHVIMLIASGMSLSGQIPDNTIGKLSKLQSLDLSNNKISALPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAV-DSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSN 197
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: EFR_ARATH (LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.276e-13 Identity = 44/175 (25.14%), Postives = 73/175 (41.71%), Query Frame = 3 Query: 144 TDQQALLALKDHIIYDPTNLLAHNWTSNTSVCTWIGITCDVNSHRVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIPSALSKCQQPATLNLQFN 668 TD QALL K + + + +W ++ C WIG+TC RV +L++ F L G I P +P + + L++L+ + N L G + S + N S + + L++N +P + L L L L KN P++L L+ +N Sbjct: 30 TDMQALLEFKSQVSENNKREVLASWNHSSPFCNWIGVTCGRRRERVISLNLGGFKLTGVISPSIGNLSFLRLLNLADNSFGSTIPQKVGRLFRLQYLNMSYNLLEGRIPSSLSNCSRLSTVDLSSNHLGHGVPSEL-GSLSKLAILDLSKNNLTGNFPASLGNLTSLQKLDFAYN 203
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4) HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13 Identity = 46/161 (28.57%), Postives = 77/161 (47.83%), Query Frame = 3 Query: 159 LLALKDHIIY-DPTNLLAHNWTSNTSVCTWIGITCDVNSH-RVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIPSALSKC 635 L AL+D I + +P N +S+T C W GITC+ N+ RV L++ L G + ++P SI+ + L+ LD + N LSG + + + N+ ++ L++N+F+G LP +IC+ ++ + L N F S KC Sbjct: 36 LEALRDFIAHLEPKPDGWINSSSSTDCCNWTGITCNSNNTGRVIRLELGNKKLSGKLSESLGKLDEIRVLNLSRNFIKDSIPLSIFNLKNLQTLDLSSNDLSGGIPTSI-NLPALQSFDLSSNKFNGSLPSHICHNSTQIRVVKLAVNYFAGNFTSGFGKC 195
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: Y2317_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g33170 OS=Arabidopsis thaliana GN=At2g33170 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.071e-12 Identity = 51/182 (28.02%), Postives = 79/182 (43.41%), Query Frame = 3 Query: 129 SNNITTDQQALLALKDHIIYDPTNLLAHNWTS-NTSVCTWIGITCDV-------NSHRVAALDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIPSALSKCQQPAT 650 S ++ +D Q LL LK+ D N L HNW + + C WIG+ C NS V +LD+S NL G + P G++P I L+ + +NQ GS+ + +S + + NN+ SG LP+ I + L +L+ L N +P +L + T Sbjct: 30 SESLNSDGQFLLELKNRGFQDSLNRL-HNWNGIDETPCNWIGVNCSSQGSSSSSNSLVVTSLDLSSMNLSGIVSPSIGGLVNLVYLNLAYNALTGDIPREIGNCSKLEVMFLNNNQFGGSIPVEINKLSQLRSFNICNNKLSGPLPEEIGD-LYNLEELVAYTNNLTGPLPRSLGNLNKLTT 209
BLAST of FC868880 vs. ExPASy Swiss-Prot
Match: Y2579_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At2g25790 OS=Arabidopsis thaliana GN=At2g25790 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 43/127 (33.86%), Postives = 61/127 (48.03%), Query Frame = 3 Query: 288 LDISQFNLQGTIPPQXXXXXXXXXXXXXXXXXXGNVPSSIYTMHTLKFLDFTDNQLSGSVSSFVFNMSSIVEIRLTNNRFSGELPKNICNYLPHLKALFLDKNMFHSKIPSALSKCQQPATLNLQFN 668 LD+ NL G IPP G +P SI+++ L LDF+DN LSG + V M S+ + L +N +G++P+ + + LP LK L L N F IP+ L K L+L N Sbjct: 246 LDLVYNNLSGPIPPSLGDLKKLEYMFLYQNKLSGQIPPSIFSLQNLISLDFSDNSLSGEIPELVAQMQSLEILHLFSNNLTGKIPEGVTS-LPRLKVLQLWSNRFSGGIPANLGKHNNLTVLDLSTN 371 The following BLAST results are available for this feature:
BLAST of FC868880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868880 ID=FC868880; Name=FC868880; organism=Citrus clementina; type=EST; length=670bpback to top |