FC868950

Overview
NameFC868950
Unique NameFC868950
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_WHEAT (Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum GN=PCM PE=1 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.935e-49
Identity = 87/134 (64.93%), Postives = 114/134 (85.07%), Query Frame = 3
Query:  234 MERYWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKKCSGS 635
            M ++W+   + KN A+VE+L+ YGV+ + KV+EVMETIDRA FVP+G  PY DSPM IGYNATISAPHMHATCL+LL++ L+PGMHALD+GSG+GYLTACFA+MVGP+GRAVG+EHIPELV +S+  +++ + +
Sbjct:    1 MAQFWAEGSLEKNNALVEYLKQYGVVRTDKVAEVMETIDRALFVPEGFTPYTDSPMPIGYNATISAPHMHATCLELLKDYLQPGMHALDVGSGSGYLTACFAMMVGPEGRAVGIEHIPELVVASTENVERSAAA 134          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_ARATH (Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana GN=PCM PE=2 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 2.485e-48
Identity = 88/134 (65.67%), Postives = 113/134 (84.33%), Query Frame = 3
Query:  234 MERYWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKKCSGS 635
            M+++WS S +NKNKAMVE+LQ++G++TS +V++ ME +DR  FV D +  YVDSPM+IGYN TISAPHMHA CLQLLE++LKPGM  LD+GSGTGYLTACFA+MVG +GRA+GVEHIPELVASS + ++  + S
Sbjct:    1 MKQFWSPSSINKNKAMVENLQNHGIVTSDEVAKAMEAVDRGVFVTDRSSAYVDSPMSIGYNVTISAPHMHAMCLQLLEKHLKPGMRVLDVGSGTGYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEASAAS 134          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_CAEEL (Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis elegans GN=pcm-1 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.418e-27
Identity = 58/126 (46.03%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  246 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            W  SG + N  ++++L++  V  S++  + M+++DR  F P    PY D+P  IGYNAT+SAPHMHA  L  L+ +L  G  ALD+GSG+GYLT C A+MVG  G  VG+EH+P+LV  S + ++K
Sbjct:    3 WRSSG-STNSELIDNLRNNRVFASQRAYDAMKSVDRGDFAPRA--PYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGSGSGYLTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRK 125          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_CHICK (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus gallus GN=PCMT1 PE=2 SV=3)

HSP 1 Score: 121.324 bits (303), Expect = 4.125e-27
Identity = 62/126 (49.21%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  246 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            W   G + ++ ++ +L+  G+I S KV EVM   DR  +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACF+ MVGP+G+ VG++HI ELV  S   +KK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKSDKVFEVMLATDRCHYAKYN--PYMDSPQSIGFQATISAPHMHAYALELLSDQLHEGAKALDVGSGSGILTACFSRMVGPKGQVVGIDHIKELVDDSINNVKK 125          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_SCHPO (Probable protein-L-isoaspartate O-methyltransferase OS=Schizosaccharomyces pombe GN=pcm2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.035e-27
Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 3
Query:  243 YWSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            +WS + ++ N A+V+HL     +T+++  + M    R+ + P    PY+DSP +IGY  TISAPHMHAT LQ LE  L+PG  ALDIGSG+GYL A  A MV P G   G+EHIP+LV +S + L K
Sbjct:    2 FWSFN-LSSNAALVQHLVESKFLTNQRAIKAMNATSRSFYCP--LSPYMDSPQSIGYGVTISAPHMHATALQELEPVLQPGCSALDIGSGSGYLVAAMARMVAPNGTVKGIEHIPQLVETSKKNLLK 125          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_BOVIN (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos taurus GN=PCMT1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.567e-26
Identity = 60/126 (47.62%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  246 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G++HI ELV  S   ++K
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLNEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRK 125          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_PIG (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus scrofa GN=PCMT1 PE=1 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 2.047e-26
Identity = 60/126 (47.62%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  246 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVGP G+ +G++HI ELV  S   ++K
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKCN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGPSGKVIGIDHIKELVDDSINNVRK 125          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_DANRE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio rerio GN=pcmt PE=2 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 2.047e-26
Identity = 62/131 (47.33%), Postives = 85/131 (64.89%), Query Frame = 3
Query:  246 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKKCSGSI 638
            W   G + +  +V +L+  G+I S +V EVM   DR+ F      PY+DSP +IGY ATISAPHMHA  L+LL ++L  G  ALD+GSG+G L+ CF+ MVGP G+ +G++HI ELV  S   +KK   S+
Sbjct:    3 WKSGGAS-HAELVNNLRKNGIIKSDRVYEVMLATDRSHF--SRCNPYMDSPQSIGYQATISAPHMHAYALELLHDHLYEGAKALDVGSGSGILSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDPSL 130          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_RAT (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus norvegicus GN=Pcmt1 PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.956e-26
Identity = 60/126 (47.62%), Postives = 83/126 (65.87%), Query Frame = 3
Query:  246 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  S   +KK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKK 125          
BLAST of FC868950 vs. ExPASy Swiss-Prot
Match: PIMT_MOUSE (Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus musculus GN=Pcmt1 PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 5.956e-26
Identity = 60/126 (47.62%), Postives = 83/126 (65.87%), Query Frame = 3
Query:  246 WSGSGVNKNKAMVEHLQHYGVITSKKVSEVMETIDRACFVPDGTPPYVDSPMAIGYNATISAPHMHATCLQLLEENLKPGMHALDIGSGTGYLTACFALMVGPQGRAVGVEHIPELVASSSRILKK 623
            W   G + ++ ++ +L+  G+I + KV EVM   DR+ +      PY+DSP +IG+ ATISAPHMHA  L+LL + L  G  ALD+GSG+G LTACFA MVG  G+ +G++HI ELV  S   +KK
Sbjct:    3 WKSGGASHSE-LIHNLRKNGIIKTDKVFEVMLATDRSHYAKSN--PYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGNSGKVIGIDHIKELVDDSITNVKK 125          
The following BLAST results are available for this feature:
BLAST of FC868950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
PIMT_WHEAT2.935e-4964.93Protein-L-isoaspartate O-methyltransferase OS=Trit... [more]
PIMT_ARATH2.485e-4865.67Protein-L-isoaspartate O-methyltransferase OS=Arab... [more]
PIMT_CAEEL1.418e-2746.03Protein-L-isoaspartate O-methyltransferase OS=Caen... [more]
PIMT_CHICK4.125e-2749.21Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_SCHPO7.035e-2748.82Probable protein-L-isoaspartate O-methyltransferas... [more]
PIMT_BOVIN1.567e-2647.62Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_PIG2.047e-2647.62Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_DANRE2.047e-2647.33Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_RAT5.956e-2647.62Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]
PIMT_MOUSE5.956e-2647.62Protein-L-isoaspartate(D-aspartate) O-methyltransf... [more]

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Properties
Property NameValue
Genbank descriptionC31006H06EF AbioticL1 Citrus clementina cDNA clone C31006H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868950 ID=FC868950; Name=FC868950; organism=Citrus clementina; type=EST; length=640bp
TTCATCAGTGTGCAGTGATAGCGTATGGTTTCCGCTATTATTATATGCCT
GGTTTAAAGCACATATTATCAACCTTCACTCTTATCCCTCACCGTCATCG
CTGTTCTTACTTACCATCACCATCACCATCACCGTCACTTGTCTCTTTGT
CTTCTTCTTTTCATCTTCCAAATCCAGATAACCTCAGTCGTTTCCTCACG
GGTAACCTCACGGGTAACTGTCCCTTTTTCAAGATGGAGAGATACTGGAG
TGGAAGTGGTGTCAACAAGAATAAAGCGATGGTGGAGCATTTGCAGCATT
ATGGAGTGATTACATCAAAAAAGGTATCTGAAGTAATGGAAACTATTGAT
CGGGCTTGCTTTGTGCCAGATGGTACTCCACCTTATGTTGACAGCCCAAT
GGCAATAGGTTACAATGCCACTATTTCAGCACCTCATATGCATGCAACAT
GCCTTCAATTATTGGAGGAGAATCTGAAACCTGGCATGCACGCTTTGGAT
ATTGGTTCTGGAACTGGATATTTGACAGCGTGCTTTGCCTTGATGGTTGG
ACCACAAGGTCGTGCTGTGGGTGTCGAGCACATTCCTGAGTTGGTGGCTT
CATCATCCAGAATATTGAAAAAGTGCAGCGGCTCCATTGC
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