FC869092
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869092 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.196e-34 Identity = 43/118 (36.44%), Postives = 68/118 (57.63%), Query Frame = 2 Query: 5 GHVGQIELASFALVQSIFLRFVNGILLGMSSATETLCGQAFGAGHYHMMGIYLQRSWLVDCVTATIMLPVFIFGTPIMNLLGQQKDIAETGGVISLWLIPFVYNFVFSLTIQMFLQAQ 358 GH+G ++LA ++ GI+LGM+SA +T+CGQA+GA Y MGI QR+ ++ A + ++ + PI+ +GQ IA G + + +IP +Y F + +Q FLQAQ Sbjct: 81 GHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQ 198 HSP 2 Score: 78.9518 bits (193), Expect = 3.196e-34 Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 375 IGWLSTASFLLHVLMSWIFVSELDLGIAGAMGSLNISAWLNIIGLFVYIFCGW-CPDTWKGFTNAAFTDILPVIKLSISSGVMICLELWY 641 + ++S FLLH L++W+ + LD G+ GA L+ S WL + +YI C +TW GF+ AF I P KL+++S VM+CLE+WY Sbjct: 204 LAYMSLGVFLLHTLLTWLVTNVLDFGLLGAALILSFSWWLLVAVNGMYILMSPNCKETWTGFSTRAFRGIWPYFKLTVASAVMLCLEIWY 293
BLAST of FC869092 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 4.655e-12 Identity = 26/82 (31.71%), Postives = 49/82 (59.76%), Query Frame = 3 Query: 402 LLHVLMSWIFVSELDLGIAGAMGSLNISAWLNIIGLFVYIFCGW---CPDTWKGFTNAAFTDILPVIKLSISSGVMICLELW 638 + + L ++I + L LG+ G+ + +S ++ +I LF+YI W DTW G++ A F + I+L+++S +M+C+E W Sbjct: 210 IFNALFNYILLYVLGLGVMGSACANTVSQFIQMILLFLYIV--WRRLYADTWGGWSQACFEEWGAFIRLAVASMLMLCIEWW 289 HSP 2 Score: 41.5874 bits (96), Expect = 4.655e-12 Identity = 29/118 (24.58%), Postives = 55/118 (46.61%), Query Frame = 2 Query: 5 GHVGQIELASFALVQSIFLRFVNGILLGMSSATETLCGQAFGAGHYHMMGIYLQRSWLVDCVTATIMLPVFIFGTPIMNLLGQQKDIAETGGVISLWLIPFVYNFVFSLTIQMFLQAQ 358 GH+G++EL + +L +I + G++ A +TL Q FG + ++GI LQR L+ + + I I+ L Q ++++ + L +P + + +LQ Q Sbjct: 78 GHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQ 195
BLAST of FC869092 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 49.2914 bits (116), Expect = 1.717e-11 Identity = 35/119 (29.41%), Postives = 61/119 (51.26%), Query Frame = 2 Query: 5 GHVGQIELASFALVQSIFLRFVNGILLGMSSATETLCGQAFGAGHYHMMGIYLQRSWLVDCVTATIMLPVFIFGTPIMNLLGQQKDIAETGGVISLWLIPFV-YNFVFSLTIQMFLQAQ 358 GH+G++EL + L S+ + G++SA +TL Q+FG + +G+ LQR L+ + +F+ ++ LL Q D+A V + IP + F+F L + +LQ+Q Sbjct: 73 GHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQTR-YLQSQ 190 HSP 2 Score: 40.4318 bits (93), Expect = 1.717e-11 Identity = 30/116 (25.86%), Postives = 54/116 (46.55%), Query Frame = 3 Query: 393 ASFLLHVLMSWIFVSELDLGIAGAMGSLNISAWLNIIGLFVYIFCGWCP---DTWKGFTNAAFTDILPVIKLSISSGVMICLELWYIPF*SYWLGT*KNAPLPYLLSLFALMSVHF 731 A+ +++V M+ + LDLG+ G+ + S + LF+Y++ W TW G+T F + +L+I S M+C+E W ++ G L ++ L SV + Sbjct: 202 AANVVNVGMNAFLLYALDLGVVGSAWANTTSQFFLSALLFLYVW--WKRIHIHTWGGWTRECFQEWSSYTRLAIPSMFMVCIEWWTFEIGTFLAGLVNVTELGAQAVIYELASVAY 315
BLAST of FC869092 vs. ExPASy Swiss-Prot
Match: S47A2_PONAB (Multidrug and toxin extrusion protein 2 OS=Pongo abelii GN=SLC47A2 PE=2 SV=1) HSP 1 Score: 46.2098 bits (108), Expect = 2.891e-11 Identity = 35/115 (30.43%), Postives = 58/115 (50.43%), Query Frame = 2 Query: 5 GHVGQIELASFALVQSIFLRFVN----GILLGMSSATETLCGQAFGAGHYHMMGIYLQRSWLVDCVTATIMLPVFIFGTPIMNLLGQQKDIAETGGVISLWLIP-----FVYNFV 322 GH+G++ELAS L + FVN + +G+SSA +TL Q+FG+ + +G+ LQR LV + +F+ I+ L Q +++ + IP F+YN + Sbjct: 60 GHLGKVELASVTLA----VAFVNVCGVSVGVGLSSACDTLMSQSFGSPNKKHVGVILQRGALVLLLCCLPCWALFLNTQHILLLFRQDPEVSRLTQDYVMIFIPGLPVIFLYNLL 170 HSP 2 Score: 42.743 bits (99), Expect = 2.891e-11 Identity = 25/84 (29.76%), Postives = 44/84 (52.38%), Query Frame = 3 Query: 420 SWIFVSELDLGIAGAMGSLNISAWLNIIGLFVYIFCGWCP-DTWKGFTNAAFTDILPVIKLSISSGVMICLELWYIPF*SYWLG 668 ++ VS L+LG+ G+ + IS + + L +YI +TW G+++ D P L++ S +MIC+E W S+ +G Sbjct: 198 NYALVSVLNLGVRGSAYANIISQFAQTVFLLLYIVLKKLHLETWAGWSSQCLQDWGPFFSLAVPSMLMICVEWWAYEIGSFLMG 281
BLAST of FC869092 vs. ExPASy Swiss-Prot
Match: S47A1_HUMAN (Multidrug and toxin extrusion protein 1 OS=Homo sapiens GN=SLC47A1 PE=1 SV=1) HSP 1 Score: 45.4394 bits (106), Expect = 3.755e-11 Identity = 30/116 (25.86%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 5 GHVGQIELASFALVQSIFLRFVNGILLGMSSATETLCGQAFGAGHYHMMGIYLQRSWLVDCVTATIMLPVFIFGTPIMNLLGQQKDIAE-TGGVISLWLIPFVYNFVFSLTIQMFL 349 GH+G++EL + L ++ + G+SSA +TL Q +G+ + +G+ LQRS LV + +F+ I+ L Q D++ T +++++ F++ L ++ L Sbjct: 64 GHLGKLELDAVTLAIAVINVTGVSVGFGLSSACDTLISQTYGSQNLKHVGVILQRSALVLLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVTIFIPALPATFLYMLQVKYLL 179 HSP 2 Score: 43.1282 bits (100), Expect = 3.755e-11 Identity = 25/83 (30.12%), Postives = 47/83 (56.63%), Query Frame = 3 Query: 393 ASFLLHVLMSWIFVSELDLGIAGAMGSLNISAWLNIIGLFVYIFCGWCPD-TWKGFTNAAFTDILPVIKLSISSGVMICLELW 638 A+ L++ L +++F+ +L LG+ G+ + IS + + LF+YI TW G++ D ++L+I S +M+C+E W Sbjct: 193 AANLVNALANYLFLHQLHLGVIGSALANLISQYTLALLLFLYILGKKLHQATWGGWSLECLQDWASFLRLAIPSMLMLCMEWW 275
BLAST of FC869092 vs. ExPASy Swiss-Prot
Match: S47A1_RAT (Multidrug and toxin extrusion protein 1 OS=Rattus norvegicus GN=Slc47a1 PE=1 SV=1) HSP 1 Score: 44.669 bits (104), Expect = 3.756e-11 Identity = 27/85 (31.76%), Postives = 48/85 (56.47%), Query Frame = 3 Query: 393 ASFLLHVLMSWIFVSELDLGIAGAMGSLNISAWLNIIGLFVYIFCGWCP---DTWKGFTNAAFTDILPVIKLSISSGVMICLELW 638 A+ L++ L +++F+ +L LG+ G+ + IS + I LF+YI W TW G++ D ++L+I S +M+C+E W Sbjct: 192 AANLVNALANYLFLHQLHLGVMGSALANTISQFALAIFLFLYIL--WRKLHHATWGGWSWECLQDWASFLQLAIPSMLMLCIEWW 274 HSP 2 Score: 43.8986 bits (102), Expect = 3.756e-11 Identity = 33/118 (27.97%), Postives = 60/118 (50.85%), Query Frame = 2 Query: 5 GHVGQIELASFALVQSIFLRFVNGILLG--MSSATETLCGQAFGAGHYHMMGIYLQRSWLVDCVTATIMLPVFIFGTPIMNLLGQQKDIAETGGVISLWLIPFV-YNFVFSLTIQMFL 349 GH+G++EL + L ++ V GI +G +SSA +TL Q +G+ + +G+ LQR L+ + +FI I+ L Q D++ + IP + F+++L ++ L Sbjct: 63 GHLGKLELDAVTLAIAVIN--VTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMVFIPALPAAFLYTLQVKYLL 178
BLAST of FC869092 vs. ExPASy Swiss-Prot
Match: S47A1_MOUSE (Multidrug and toxin extrusion protein 1 OS=Mus musculus GN=Slc47a1 PE=1 SV=2) HSP 1 Score: 44.2838 bits (103), Expect = 4.875e-11 Identity = 27/85 (31.76%), Postives = 47/85 (55.29%), Query Frame = 3 Query: 393 ASFLLHVLMSWIFVSELDLGIAGAMGSLNISAWLNIIGLFVYIFCGW---CPDTWKGFTNAAFTDILPVIKLSISSGVMICLELW 638 A+ L++ L +++F+ L LG+ G+ + IS + I LF+YI W TW G++ D ++L+I S +M+C+E W Sbjct: 193 AANLVNALANYVFLYHLHLGVMGSALANTISQFALAIFLFLYIL--WRRLHQATWGGWSWECLQDWASFLRLAIPSMLMLCIEWW 275 HSP 2 Score: 43.8986 bits (102), Expect = 4.875e-11 Identity = 32/118 (27.12%), Postives = 61/118 (51.69%), Query Frame = 2 Query: 5 GHVGQIELASFALVQSIFLRFVNGILLG--MSSATETLCGQAFGAGHYHMMGIYLQRSWLVDCVTATIMLPVFIFGTPIMNLLGQQKDIAE-TGGVISLWLIPFVYNFVFSLTIQMFL 349 GH+G++EL + L ++ V GI +G +SSA +TL Q +G+ + +G+ LQR L+ + +FI I+ L Q D++ T + +++ F+++L ++ L Sbjct: 64 GHLGKLELDAVTLAIAVIN--VTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFINTEQILLLFRQDPDVSRLTQTYVMIFIPALPAAFLYTLQVKYLL 179 The following BLAST results are available for this feature:
BLAST of FC869092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869092 ID=FC869092; Name=FC869092; organism=Citrus clementina; type=EST; length=736bpback to top |