FC869263
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.004e-88 Identity = 162/215 (75.35%), Postives = 184/215 (85.58%), Query Frame = 1 Query: 22 MSVSLNANLYQPSLS--CNLKLYSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660 M+VS N L+QPSLS C++KLYSGLK QS S +G NL+ EFYGRV+KSL SG K R R+ MMPIGTP+V YR EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD++DDS+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GEKG+R AMPLSRIAL SPAGAARGQADDI+NEA EL Sbjct: 1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKEL 213
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.504e-43 Identity = 85/146 (58.22%), Postives = 104/146 (71.23%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660 MPIG PKV YR PGE QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P SRI + P+G RGQA DI EA E+ Sbjct: 1 MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREI 146
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.837e-42 Identity = 83/146 (56.85%), Postives = 103/146 (70.55%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660 MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P SRI + P+G RGQA DI EA E+ Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRGQATDIEIEAREI 146
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 6.317e-42 Identity = 83/146 (56.85%), Postives = 103/146 (70.55%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660 MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P SRI + P+G RGQA DI EA E+ Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREI 146
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 9.121e-41 Identity = 78/146 (53.42%), Postives = 109/146 (74.66%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660 MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ + SK +Y+YIN PGG VT +A+YDTM +K+ V T CVG A +A F+LAGG +G R A+P SRI + P G +RGQA ++ +E++E+ Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPHSRIMIHQPEGGSRGQASEVLSESEEV 146
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_CHLVU (ATP-dependent Clp protease proteolytic subunit OS=Chlorella vulgaris GN=clpP PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 5.912e-40 Identity = 76/146 (52.05%), Postives = 107/146 (73.29%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660 MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + +K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG++G R A+P SRI + P G ++GQA ++ +E+ E+ Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQNKGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPHSRIMVHQPEGGSQGQASEVLSESQEV 146
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 1.902e-38 Identity = 76/146 (52.05%), Postives = 103/146 (70.55%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660 MPIG PKV YR PG G QW+D++N L +R+IF+G+ +D+E +N I+A+MLYLDS D K +++YIN PGG V+ LAIYDTMQ +++ V T CVG A + FLL G KG R+++P SRI + P G A+GQA DI +A E+ Sbjct: 1 MPIGIPKVPYRLPG-GQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGIQAKEI 145
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_PSEAK (ATP-dependent Clp protease proteolytic subunit OS=Pseudendoclonium akinetum GN=clpP PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.233e-37 Identity = 74/146 (50.68%), Postives = 103/146 (70.55%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660 MPIG PKV YR G +WVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ D SK +Y+YIN PGG VT + ++D M +KS V T CVG A +A F+LAGG KG R A+P SRI + P G ++GQA + +E++E+ Sbjct: 1 MPIGVPKVPYRLAGNEVAEWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEDKSKGIYVYINSPGGSVTCGVGVFDAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPHSRIMIHQPEGGSQGQASVVLSESEEV 146
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.103e-37 Identity = 77/147 (52.38%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADEL 660 MPIG P V YR PG +W+D++N L ER+IF+GQ + + +N I+A +LYLDS D SK +Y+YIN PGG VT +AIYDTMQ +KSPV T C+G A + FLL G KG R A+P SRI + P G R QA DI EA E+ Sbjct: 1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEI 147
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.103e-37 Identity = 77/147 (52.38%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADEL 660 MPIG P V YR PG +W+D++N L ER+IF+GQ + + +N I+A +LYLDS D SK +Y+YIN PGG VT +AIYDTMQ +KSPV T C+G A + FLL G KG R A+P SRI + P G R QA DI EA E+ Sbjct: 1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEI 147 The following BLAST results are available for this feature:
BLAST of FC869263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869263 ID=FC869263; Name=FC869263; organism=Citrus clementina; type=EST; length=662bpback to top |