FC869263

Overview
NameFC869263
Unique NameFC869263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length662
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.004e-88
Identity = 162/215 (75.35%), Postives = 184/215 (85.58%), Query Frame = 1
Query:   22 MSVSLNANLYQPSLS--CNLKLYSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            M+VS N  L+QPSLS  C++KLYSGLK QS S   +G  NL+ EFYGRV+KSL SG    K  R R+ MMPIGTP+V YR   EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD++DDS+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GEKG+R AMPLSRIAL SPAGAARGQADDI+NEA EL
Sbjct:    1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TGKASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLSRIALQSPAGAARGQADDIQNEAKEL 213          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.504e-43
Identity = 85/146 (58.22%), Postives = 104/146 (71.23%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            MPIG PKV YR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D  K + +YIN PGG VT  +AIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+
Sbjct:    1 MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPGKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREI 146          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP3_ANASP (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Anabaena sp. (strain PCC 7120) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.837e-42
Identity = 83/146 (56.85%), Postives = 103/146 (70.55%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K +Y+YIN PGG VT  LAIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRGQATDIEIEAREI 146          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 6.317e-42
Identity = 83/146 (56.85%), Postives = 103/146 (70.55%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            MPIG PKV YR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D  K +Y+YIN PGG VT  LAIYDTMQ +KS V T CVG A  +  FLLA G KG R A+P SRI +  P+G  RGQA DI  EA E+
Sbjct:    1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPHSRIMIHQPSGGTRGQATDIEIEAREI 146          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.121e-41
Identity = 78/146 (53.42%), Postives = 109/146 (74.66%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ + SK +Y+YIN PGG VT  +A+YDTM  +K+ V T CVG A  +A F+LAGG +G R A+P SRI +  P G +RGQA ++ +E++E+
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKSKDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPHSRIMIHQPEGGSRGQASEVLSESEEV 146          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_CHLVU (ATP-dependent Clp protease proteolytic subunit OS=Chlorella vulgaris GN=clpP PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 5.912e-40
Identity = 76/146 (52.05%), Postives = 107/146 (73.29%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q +D+E +NQ++  MLYL++ + +K +Y+YIN PGG VT  +A+YD M  +KS V T CVG A  +A F+LAGG++G R A+P SRI +  P G ++GQA ++ +E+ E+
Sbjct:    1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQNKGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPHSRIMVHQPEGGSQGQASEVLSESQEV 146          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP1_GLOVI (ATP-dependent Clp protease proteolytic subunit 1 OS=Gloeobacter violaceus GN=clpP1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.902e-38
Identity = 76/146 (52.05%), Postives = 103/146 (70.55%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            MPIG PKV YR PG G  QW+D++N L  +R+IF+G+ +D+E +N I+A+MLYLDS D  K +++YIN PGG V+  LAIYDTMQ +++ V T CVG A  +  FLL  G KG R+++P SRI +  P G A+GQA DI  +A E+
Sbjct:    1 MPIGIPKVPYRLPG-GQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEKDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHSRIMIHQPLGGAQGQATDIGIQAKEI 145          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP_PSEAK (ATP-dependent Clp protease proteolytic subunit OS=Pseudendoclonium akinetum GN=clpP PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.233e-37
Identity = 74/146 (50.68%), Postives = 103/146 (70.55%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 660
            MPIG PKV YR  G    +WVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ D SK +Y+YIN PGG VT  + ++D M  +KS V T CVG A  +A F+LAGG KG R A+P SRI +  P G ++GQA  + +E++E+
Sbjct:    1 MPIGVPKVPYRLAGNEVAEWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEDKSKGIYVYINSPGGSVTCGVGVFDAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPHSRIMIHQPEGGSQGQASVVLSESEEV 146          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP3_SYNE7 (ATP-dependent Clp protease proteolytic subunit 3 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.103e-37
Identity = 77/147 (52.38%), Postives = 97/147 (65.99%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADEL 660
            MPIG P V YR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS D SK +Y+YIN PGG VT  +AIYDTMQ +KSPV T C+G A  +  FLL  G KG R A+P SRI +  P  G  R QA DI  EA E+
Sbjct:    1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEI 147          
BLAST of FC869263 vs. ExPASy Swiss-Prot
Match: CLPP2_SYNP6 (ATP-dependent Clp protease proteolytic subunit 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.103e-37
Identity = 77/147 (52.38%), Postives = 97/147 (65.99%), Query Frame = 1
Query:  223 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQADDIRNEADEL 660
            MPIG P V YR PG    +W+D++N L  ER+IF+GQ + +  +N I+A +LYLDS D SK +Y+YIN PGG VT  +AIYDTMQ +KSPV T C+G A  +  FLL  G KG R A+P SRI +  P  G  R QA DI  EA E+
Sbjct:    1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSSKPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPHSRIMIHQPLGGTGRRQASDIEIEAKEI 147          
The following BLAST results are available for this feature:
BLAST of FC869263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CLPR2_ARATH2.004e-8875.35ATP-dependent Clp protease proteolytic subunit-rel... [more]
CLPP2_THEEB1.504e-4358.22ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP3_ANASP4.837e-4256.85Probable ATP-dependent Clp protease proteolytic su... [more]
CLPP2_ANAVT6.317e-4256.85ATP-dependent Clp protease proteolytic subunit 2 O... [more]
CLPP_OLTVI9.121e-4153.42ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP_CHLVU5.912e-4052.05ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP1_GLOVI1.902e-3852.05ATP-dependent Clp protease proteolytic subunit 1 O... [more]
CLPP_PSEAK1.233e-3750.68ATP-dependent Clp protease proteolytic subunit OS=... [more]
CLPP3_SYNE72.103e-3752.38ATP-dependent Clp protease proteolytic subunit 3 O... [more]
CLPP2_SYNP62.103e-3752.38ATP-dependent Clp protease proteolytic subunit 2 O... [more]

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Properties
Property NameValue
Genbank descriptionC31010C10EF AbioticL1 Citrus clementina cDNA clone C31010C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869263 ID=FC869263; Name=FC869263; organism=Citrus clementina; type=EST; length=662bp
CGGGGACTCTCTCGCGCTAACATGTCCGTTTCTCTTAACGCAAACTTATA
TCAACCTTCTCTGAGCTGTAACCTCAAGCTTTATTCTGGATTAAAGATTC
AATCACCAAGTGTTTTTGGAACTGGGAAACCTAATTTGAGTGCTGAATTC
TATGGCAGAGTTCATAAGAGCCTCTACTCCGGGATTCGTAATGATAAACC
AATAAGGGGACGAATTGCAATGATGCCAATTGGGACACCAAAAGTGCTTT
ATAGGACGCCTGGTGAGGGATCTTGGCAATGGGTTGATCTATGGAATGCC
CTATATCGAGAACGTGTTATTTTCATTGGGCAAAATATAGATGAAGAATT
TAGCAACCAAATATTGGCAACGATGTTGTATCTAGACAGTGTTGATGATT
CCAAAAGGGTTTATATGTACATCAACGGTCCTGGTGGGGATGTTACTCCC
ACCTTGGCAATTTACGACACTATGCAGAGCTTGAAGAGTCCTGTTGGCAC
TCACTGTGTGGGCTTTGCCTATCATTTAGCAGGGTTTCTTCTAGCAGGTG
GAGAAAAGGGTAATCGGTCTGCAATGCCTCTTTCGAGAATTGCTTTAGAC
TCTCCGGCTGGTGCAGCTCGCGGTCAGGCTGATGACATTCGTAATGAAGC
AGATGAGCTTCT
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