FC869266

Overview
NameFC869266
Unique NameFC869266
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869266 vs. ExPASy Swiss-Prot
Match: ASPL2_ARATH (Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 1.712e-48
Identity = 90/205 (43.90%), Postives = 133/205 (64.88%), Query Frame = 2
Query:   77 LRNCLCIVLIATAAVGGVSSNHGVFSVKYRYADRERSLSLLKEHDARRQQRILAGVDLPLGGSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSGNL 691
            LR  LCIV+     V   +S + VF  ++++A ++++L   K HD RR  R+LA +DLPLGG SR D VGLY+ KI +G+PPK+Y+VQVDTGSDI+W+NC  C +CP +++L   L+L+D+  SST K V CD +FC  +       C     C Y  +Y D S++ G F++D++  ++V+GDL+T      ++FGCG+ QSG L
Sbjct:    3 LRRKLCIVVAVFVIVIEFASANFVFKAQHKFAGKKKNLEHFKSHDTRRHSRMLASIDLPLGGDSRVDSVGLYFTKIKLGSPPKEYHVQVDTGSDILWINCKPCPKCPTKTNLNFRLSLFDMNASSTSKKVGCDDDFCSFI--SQSDSCQPALGCSYHIVYADESTSDGKFIRDMLTLEQVTGDLKTGPLGQEVVFGCGSDQSGQL 205          
BLAST of FC869266 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.048e-13
Identity = 46/162 (28.40%), Postives = 77/162 (47.53%), Query Frame = 2
Query:  215 RRQQRILAGVDLPLGGSSRPD-----GVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG 685
            +R +R +  ++  L  SS  +     G G Y   + IGTP   +   +DTGSD++W  C  C +C  + +      +++ +DSS+   + C+ ++C  +   P   C  N  C Y   YGDGS+T GY   +   ++        TS+  ++ FGCG    G
Sbjct:   66 KRGERRMRSINAMLQSSSGIETPVYAGDGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPT-----PIFNPQDSSSFSTLPCESQYCQDL---PSETCN-NNECQYTYGYGDGSTTQGYMATETFTFE--------TSSVPNIAFGCGEDNQG 210          
BLAST of FC869266 vs. ExPASy Swiss-Prot
Match: ASPL1_ARATH (Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 59/182 (32.42%), Postives = 88/182 (48.35%), Query Frame = 2
Query:  194 LLKEHDARRQQRILAGVD---LPLGGS----SRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWV--NCIQCKECPRR--SSLGI-ELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDC-TANTSCPYLEIYGDG-SSTTGYFVQDVVQYDKVSGDL---QTTSTNGSLIFGCGARQSGN 688
            LL E D RRQ+  L       +P  GS    S  D   L+Y  I IGTP   + V +DTGS+++W+  NC+QC        SSL   +L  Y+   SST K   C  + C        +DC +    CPY   Y  G +S++G  V+D++     + +     ++S    ++ GCG +QSG+
Sbjct:   61 LLAESDFRRQRMNLGAKVQSLVPSEGSKTISSGNDFGWLHYTWIDIGTPSVSFLVALDTGSNLLWIPCNCVQCAPLTSTYYSSLATKDLNEYNPSSSSTSKVFLCSHKLCDSA-----SDCESPKEQCPYTVNYLSGNTSSSGLLVEDILHLTYNTNNRLMNGSSSVKARVVIGCGKKQSGD 237          
BLAST of FC869266 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 50/186 (26.88%), Postives = 85/186 (45.70%), Query Frame = 2
Query:  149 FSVKYRYADRERSLSLLK------EHDARRQQRILAGVDLPLG-GSSRPDGVGLYYAKIGIGTPPKDYYVQVDTGSDIMWVNCIQCKECPRRSSLGIELTLYDIKDSSTGKFVTCDQEFCHGVYGGPLTDCTANTSCPYLEIYGDGSSTTGYFVQDVVQYDKVSGDLQTTSTNGSLIFGCGARQSG 685
            F +   + D  ++L+  +      E  +RR QR+ A ++ P G  +S   G G Y   + IGTP + +   +DTGSD++W  C  C +C  +S+      +++ + SS+   + C  + C  +     +   +N  C Y   YGDGS T G    + + +  VS          ++ FGCG    G
Sbjct:   41 FQIMLEHVDSGKNLTKFQLLERAIERGSRRLQRLEAMLNGPSGVETSVYAGDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQST-----PIFNPQGSSSFSTLPCSSQLCQAL----SSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSVS--------IPNITFGCGENNQG 209          
The following BLAST results are available for this feature:
BLAST of FC869266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASPL2_ARATH1.712e-4843.90Aspartic proteinase-like protein 2 OS=Arabidopsis ... [more]
NEP2_NEPGR1.048e-1328.40Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
ASPL1_ARATH8.874e-1332.42Aspartic proteinase-like protein 1 OS=Arabidopsis ... [more]
NEP1_NEPGR1.977e-1226.88Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionC31010D01EF AbioticL1 Citrus clementina cDNA clone C31010D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869266 ID=FC869266; Name=FC869266; organism=Citrus clementina; type=EST; length=695bp
AAAATAGGGAAAGATCCTTAAAAAAATTAAGCGAAGCAAAGGCGAAGTTG
AATAGTGAAAAGTGATGGGTCTTTGTCTTCGTAATTGCCTCTGTATTGTT
CTAATTGCGACGGCGGCTGTCGGTGGCGTCTCCTCAAATCACGGAGTGTT
CAGCGTCAAGTACAGATACGCTGACCGCGAGCGCTCCCTCAGTCTCCTTA
AAGAACACGACGCCCGCCGCCAGCAACGTATTCTCGCCGGCGTCGATCTT
CCATTAGGCGGCTCCAGCCGCCCTGACGGTGTCGGGCTTTATTATGCGAA
AATTGGAATTGGAACACCTCCAAAGGACTATTACGTACAAGTTGATACCG
GGAGTGATATAATGTGGGTGAATTGCATCCAATGCAAAGAATGCCCAAGA
AGGAGCTCTCTTGGTATTGAGCTTACGTTGTACGATATAAAGGACTCATC
CACTGGGAAGTTCGTTACTTGTGATCAGGAGTTTTGCCATGGGGTCTACG
GAGGTCCGTTGACTGATTGCACGGCTAATACGTCCTGTCCGTATCTTGAG
ATATACGGAGATGGAAGCTCCACTACTGGATACTTTGTACAGGATGTTGT
ACAATATGATAAAGTGTCTGGNGATCTCCAAACTACATCAACAAATGGAA
GCCTCATTTTTGGTTGTGGTGCTAGACAATCTGGGAATCTAAGAT
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