FC869267

Overview
NameFC869267
Unique NameFC869267
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 346.28 bits (887), Expect = 9.772e-95
Identity = 162/193 (83.94%), Postives = 181/193 (93.78%), Query Frame = 1
Query:  139 EEDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPA 717
            E +PGL+MNFYKDTCPQAEDI++EQVKLLYKRHKNTAFSWLRNIFHDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+
Sbjct:   26 EAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPS 218          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.921e-64
Identity = 115/188 (61.17%), Postives = 147/188 (78.19%), Query Frame = 1
Query:  154 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIP-LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP 714
            L MN+YK++CP+AE+II++QV+ LY +H NTA SWLRN+FHDC V+SCDASLLL++ R   SE++  RSFGMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I  +KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +DP
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDP 217          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37
Identity = 75/193 (38.86%), Postives = 120/193 (62.18%), Query Frame = 1
Query:  163 NFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---------PEVDP 714
            ++Y+++CP AE II + ++ +Y    + A   +R +FHDC ++ CDAS+LLD+     SEK+   +  ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP  + ++SV+L+RF+  G +    V+L G+HS+G THC    +RLY         PE++P
Sbjct:   71 DYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNP 263          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.306e-34
Identity = 75/187 (40.11%), Postives = 101/187 (54.01%), Query Frame = 1
Query:  154 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 711
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+         R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL G+H++G++ C     R+Y E +
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETN 216          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.318e-34
Identity = 65/187 (34.76%), Postives = 109/187 (58.29%), Query Frame = 1
Query:  142 EDPGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 699
            +D  L +++YK TCP   D+IK++++ + K     A   +R  FHDC VQ CD S+LLD T     EK+   +   ++ ++ ++ IK  +E ECPGVVSCAD+L +  RD  + +GGPY  +  GR+D + +  E+    LP   + +  ++ +F + G+    +VAL+G+H++G+  C     R+Y
Sbjct:   26 KDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIY 212          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.640e-34
Identity = 74/183 (40.44%), Postives = 109/183 (59.56%), Query Frame = 1
Query:  151 GLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 699
            GL + FY   CP+AE I+K+ V    K  +  A   LR  FHDC V+ C+ S+LL+   K   EK    +  +R F  I+N+K A+E+ECPG+VSC+D+L L  RD +VAL GP   ++TGRRDG  +        LP   +++S ++ +F + G+D   LV L G H++G  HC ++ +RLY
Sbjct:   31 GLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKK-DEKNSIPNLTLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLY 212          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33
Identity = 73/187 (39.04%), Postives = 102/187 (54.55%), Query Frame = 1
Query:  154 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE-MDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 711
            L  NFY  TCP+  D +K  V+    + +    S LR  FHDC V  CDAS+LLD T     E+  +     +R    I+NIK  VE  CPGVVSCADI+ ++ RD VV LGGP   +K GRRD + +        +P    S+S ++ +F A G+    +VAL G+H++G+  C     R+Y E +
Sbjct:   27 LSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETN 213          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33
Identity = 75/191 (39.27%), Postives = 111/191 (58.12%), Query Frame = 1
Query:  148 PGLVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL--DSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP 714
            P L  ++Y+ TCP    I++E V     +   TA   LR  FHDC ++ CDAS+L+  +S  K   + +++ S     F  +  IK A+E  CPGVVSCADIL  + RD V  +GGP+  +K GR+DG +S+A  ++  LP  N S+  +L  F   G     LVAL G H++G +HC +  +R++P+VDP
Sbjct:   24 PNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDP 214          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33
Identity = 74/187 (39.57%), Postives = 102/187 (54.55%), Query Frame = 1
Query:  154 LVMNFYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVD 711
            L  NFY  +CP     +K  VK           S LR  FHDC V  CD S+LLD T     E+    +    R F  I +IK AVE+ CPGVVSCADIL ++ RD VV LGGP   +K GRRD + +        +P  + S+S ++  F+A+G+    +VAL G+H++G++ CV    R+Y E +
Sbjct:    2 LTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETN 188          
BLAST of FC869267 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.144e-33
Identity = 67/179 (37.43%), Postives = 105/179 (58.66%), Query Frame = 1
Query:  166 FYKDTCPQAEDIIKEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY 699
            FY +TCP+AE I++ ++K    +   +  S +R  FHDC V  CDASLLLD T   L EK  +     +R+F  +++IKEA+E+ CP  VSCADI++++ RD V   GGP   +K GR+D   +  +  +  +P    + + +++ F    +    +VAL GSHS+G+  C  ++ RLY
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLY 205          
The following BLAST results are available for this feature:
BLAST of FC869267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER42_ARATH9.772e-9583.94Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH8.921e-6461.17Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER48_ARATH1.434e-3738.86Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER52_ARATH3.306e-3440.11Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER11_ARATH4.318e-3434.76Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER56_ARATH5.640e-3440.44Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER4_VITVI4.774e-3339.04Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER41_ARATH4.774e-3339.27Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PERP7_BRARA6.235e-3339.57Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER17_ARATH8.144e-3337.43Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31010D03EF AbioticL1 Citrus clementina cDNA clone C31010D03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869267 ID=FC869267; Name=FC869267; organism=Citrus clementina; type=EST; length=718bp
GAAGAGAGATCTAAACCAAGGCTGGTCACCTTTAGTGAGTGAAGAGTAGA
AGAGACAATGGGTACGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCT
TCTCAGCTGTGTCTCTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCA
GGTCTTGTTATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACAT
TATCAAGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCAT
TTTCTTGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGAT
GCTTCACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAAAT
GGACAGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAG
AAGCTGTTGAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATTCTT
GTCCTGTCCGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCC
TCTCAAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTG
AGCAGTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTTGAGAGG
TTTGCAGCCATTGGCATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATC
TCACAGTGTTGGCAGAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACC
CAGAAGTTGACCCTGCAC
back to top