FC869281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.253e-35 Identity = 88/175 (50.29%), Postives = 106/175 (60.57%), Query Frame = 1 Query: 115 MSPKSDMIIKFTEHVVTTDKPIIS------TPAPQKLVRIILXXXXXXXXXXXXEQVINHVRRVKRHVKQINLNNXXXXXXXXXXXXXXSNKLQHNKKI-KRHAHQPPPQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618 M+ S +IKFT+H+VTT+K + S Q++VRIIL ++ N VRRVKRHV +INL + K I R P S+VT RKKFRGVR+RPWGRWAAEIRDP R KR+WLGT+DTPEEAA VYD+AAVKLKG +AVTNFP Sbjct: 1 MTENSVPVIKFTQHIVTTNKHVFSEHNEKSNSELQRVVRIILTDADATDSSD--DEGRNTVRRVKRHVTEINL-------------------MPSTKSIGDRKRRSVSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFP 154
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: CRF1_ARATH (Ethylene-responsive transcription factor CRF1 OS=Arabidopsis thaliana GN=CRF1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24 Identity = 59/118 (50.00%), Postives = 78/118 (66.10%), Query Frame = 1 Query: 280 RRVKRHVKQINLNNXXXXXXXXXXXXXXSNKLQHNKKIKRHAHQPPPQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPVLT 633 RRVK++VK++ L++ S+K + KK ++ P T +KFRGVR+RPWG+WAAEIRDP+RR R+WLGTFDT EEAA VYD AA++L+G NA NFP P +T Sbjct: 43 RRVKKYVKEVVLDSVV------------SDKEKPMKKKRKKRVVTVPVVVTTATRKFRGVRQRPWGKWAAEIRDPSRRVRVWLGTFDTAEEAAIVYDNAAIQLRGPNAELNFPPPPVT 148
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.818e-23 Identity = 64/176 (36.36%), Postives = 92/176 (52.27%), Query Frame = 1 Query: 139 IKFTEHVVTTDKPIISTPAPQK--------LVRIILXXXXXXXXXXXXEQVINHVRRVKRHVKQINLNNXXXXXXXXXXXXXXSNKLQHNKKIKRHAHQPPPQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNF-----PNPV 627 +K+TEH K + +K LVR+ + E+ + RRVKR + +I + ++ + K+I + P ++KK+RGVR+RPWG+WAAEIRDP +R+R+WLGTF T EEAA VYD AA+KL+G +A+TNF P PV Sbjct: 11 VKYTEHKTVIRKYTKKSSMERKTSVRDSARLVRVSMTDRDATDSSSDEEEFLFPRRRVKRLINEIRVE-----PSSSSTGDVSASPTKDRKRINVDSTVQKPSVSGQNQKKYRGVRQRPWGKWAAEIRDPEQRRRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQPEPEPV 181
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.731e-22 Identity = 63/169 (37.28%), Postives = 93/169 (55.03%), Query Frame = 1 Query: 139 IKFTEHVVTTDKPI--ISTPAPQKLVRIILXXXXXXXXXXXXEQ-----VINHVRRVKRHVKQINLNNXXXXXXXXXXXXXXSNKLQHNKKIKRHAHQPPPQSEVTH---RKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNF 615 IKFTEH T + ++ +++RI + E+ ++ RRVK+ V ++ L++ +K + + +K + P S T KKFRGVR+RPWG+WAAEIRDP +R RLWLGT++T EEAA VYD AA++L+G +A+TNF Sbjct: 12 IKFTEHKTNTTTIVSELTNTHQTRILRISVTDPDATDSSSDDEEEEHQRFVSKRRRVKKFVNEVYLDSGAVVTGSCGQM---ESKKRQKRAVKSESTVSPVVSATTTTTGEKKFRGVRQRPWGKWAAEIRDPLKRVRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF 177
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 1 Query: 280 RRVKRHVKQINLN---NXXXXXXXXXXXXXXSNKLQHNKKIKRHAHQPPPQSEVTHR-KKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNP 624 RRVKR V +I + N S+ + +P + V+ + KKFRGVR+RPWG+WAAEIRDP +R+R+WLGTF+T EEAA VYD AA++L+G +A+TNF P Sbjct: 65 RRVKRFVNEITVEPSCNNVVTGVSMKDRKRLSSSSDETQSPASSRQRPNNKVSVSGQIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIP 183
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: EF113_ARATH (Ethylene-responsive transcription factor ERF113 OS=Arabidopsis thaliana GN=ERF113 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 42/73 (57.53%), Postives = 52/73 (71.23%), Query Frame = 1 Query: 409 QPPPQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPV 627 Q P + R+ +RGVR+RPWG+WAAEIRDP + R+WLGTF+T EEAA YD+AA+K KG A NFP V Sbjct: 26 QHQPDQDQPRRRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEEAALAYDRAALKFKGTKAKLNFPERV 98
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: CRF6_ARATH (Ethylene-responsive transcription factor CRF6 OS=Arabidopsis thaliana GN=CRF6 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.956e-19 Identity = 63/164 (38.41%), Postives = 84/164 (51.22%), Query Frame = 1 Query: 139 IKFTEHVVTTDKPIISTPAPQKLVRIILXXXXXXXXXXXXEQVINH--VRRVKRHVKQINLNNXXXXXXXXXXXXXXSNKLQHNKKIKRHAHQPPPQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNP 624 +KFTE+ T+ + +LVRI + + N V RVKR+VK+I + K +H K + S KK+RGVR+RPWG++AAEIRDP+ R R+WLGTF T EEAA YD+AA+ LKG A+TNF P Sbjct: 8 VKFTENRTVTNVAATPSNGSPRLVRITVTDPFATDSSSDDDDNNNVTVVPRVKRYVKEIRF------CQGESSSSTAARKGKH--KEEESVVVEDDVSTSVKPKKYRGVRQRPWGKFAAEIRDPSSRTRIWLGTFVTAEEAAIAYDRAAIHLKGPKALTNFLTP 163
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.123e-18 Identity = 39/58 (67.24%), Postives = 50/58 (86.21%), Query Frame = 1 Query: 445 KFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFP 618 ++RGVR+RPWGR+AAEIRDP ++ R+WLGTFDTPEEAA YD+ A++ +GA A TNFP Sbjct: 19 RYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.916e-18 Identity = 40/68 (58.82%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 439 RKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPVLTGDD 642 R+ +RGVR+RPWG+WAAEIRDP + R+WLGTF+T E AA YD+AA+K KG+ A NFP V G + Sbjct: 87 RRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGSN 154
BLAST of FC869281 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 2.503e-18 Identity = 39/70 (55.71%), Postives = 52/70 (74.29%), Query Frame = 1 Query: 418 PQSEVTHRKKFRGVRRRPWGRWAAEIRDPNRRKRLWLGTFDTPEEAASVYDQAAVKLKGANAVTNFPNPV 627 P+ ++++RGVR+RPWG+WAAEIRDP+R R+WLGTFDT E AA YD+AA++ +G A NFP V Sbjct: 67 PEEAREKKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPEDV 136 The following BLAST results are available for this feature:
BLAST of FC869281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 131
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869281 ID=FC869281; Name=FC869281; organism=Citrus clementina; type=EST; length=711bpback to top |