FC869313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869313 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.644e-27 Identity = 83/211 (39.34%), Postives = 110/211 (52.13%), Query Frame = 1 Query: 187 VPASSEPKTNVHSKDIVHSPENNLCARLYIP----NQRQNKKL------------PLLVYFHGGGFCIETAFSPTYHNYLNTLVSEANVIAVSVDYRRAPENPVPCAHDDSWTALKWVASHVNGEGPEDWLNCFADFQ-RVFFSGDSAGANIAHHMGMRHGRRILDGVNVVGIVLIHPYFLGREAVGNE-TADAK------TRDWVAGLWR 747 VPA+S P V S D V S NL R+Y P +Q ++ L P+L++FHGG F +A S Y + LV+ V+ VSVDYRR+PE+ PCA+DD W AL WV S V WL D V+ +GDS+G NIAH++ +R +GV V+G +L+HP F G+E +E T D K RDW WR Sbjct: 53 VPANSFPLDGVFSFDHVDST-TNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATN---EGVKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDW---YWR 249
BLAST of FC869313 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.642e-26 Identity = 72/208 (34.62%), Postives = 104/208 (50.00%), Query Frame = 1 Query: 187 VPASSEPKTNVHSKDIVHSPENNLCARLYIP-------------NQRQNKKLPLLVYFHGGGFCIETAFSPTYHNYLNTLVSEANVIAVSVDYRRAPENPVPCAHDDSWTALKWVASHVNGEGPEDWLNCFADFQ-RVFFSGDSAGANIAHHMGMRHGRRILDGVNVVGIVLIHPYFLGREAVGNET-------ADAKTRDWVAGLWR 747 VPA++ P V S D++ + NL +R+Y P N + +P++V+FHGG F +A S Y LV + VSV+YRRAPEN PCA+DD W LKWV S WL D + R+F +GDS+G NI H++ + R + ++V+G +L++P F G E +E + RDW WR Sbjct: 53 VPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS-------SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAV---RAVESRIDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDW---YWR 247
BLAST of FC869313 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.659e-26 Identity = 70/204 (34.31%), Postives = 103/204 (50.49%), Query Frame = 1 Query: 187 VPASSEPKTNVHSKDIVHSPENNLCARLYIPNQRQNKK---------------LPLLVYFHGGGFCIETAFSPTYHNYLNTLVSEANVIAVSVDYRRAPENPVPCAHDDSWTALKWVASHVNGEGPEDWLNCFADFQ-RVFFSGDSAGANIAHHMGMRHGRRILDGVNVVGIVLIHPYFLGREAVGNETA-------DAKTRDW 729 V A++ P V S D++ NL +R+Y P ++ +P++++FHGG F +A S Y LV + VSV+YRRAPENP PCA+DD W AL WV S WL D + +F +GDS+G NIAH++ +R G G++V+G +L++P F G E +E + + RDW Sbjct: 53 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS-------RSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDW 246
BLAST of FC869313 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.458e-23 Identity = 75/226 (33.19%), Postives = 106/226 (46.90%), Query Frame = 1 Query: 151 DGKVERLKGNDI---VPASSEPKTNVHSKDIVHSPENNLCARLY----------------------IPNQRQNKKLPLLVYFHGGGFCIETAFSPTYHNYLNTLVSEANVIAVSVDYRRAPENPVPCAHDDSWTALKWVASHVNGEGPEDWLNCFADFQ-RVFFSGDSAGANIAHHMGMRHGRRILDGVNVVGIVLIHPYFLGREAVGNET-------ADAKTRDW 729 DG ER G + VPA++ P V S D + L R+Y + + + P++++FHGG F +A S Y + V + + VSV+YRRAPE+ PCA+DD WTALKWV S + ++ D Q RVF SGDS+G NIAHH+ +R +GV V G +L++ F G E +E + RDW Sbjct: 38 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAAD---EGVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDW 253
BLAST of FC869313 vs. ExPASy Swiss-Prot
Match: LIP2_MORS1 (Lipase 2 OS=Moraxella sp. (strain TA144) GN=lip2 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 45/137 (32.85%), Postives = 67/137 (48.91%), Query Frame = 1 Query: 196 SSEPKTNVHSKDIVHSPENNLCARLYIPN----QRQNKKLPLLVYFHGGGFCIETAFSPTYHNYLNTLVSEANVIAVSVDYRRAPENPVPCAHDDSWTALKWVASHVNGEGPEDWLNCFADFQRVFFSGDSAGANIA 594 S+E + K I ++ ++ R Y + +R++ +++FHGGGFCI T+H + +T+ ++ VSVDYR APE P P A D A W+A H G A R+ SGDSAG +A Sbjct: 119 STENAVSWQDKTIANADGGDMTVRCYQKSTQNSERKSTDEAAMLFFHGGGFCIGDI--DTHHEFCHTVCAQTGWAVVSVDYRMAPEYPAPTALKDCLAAYAWLAEHSQSLG--------ASPSRIVLSGDSAGGCLA 245
BLAST of FC869313 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.129e-12 Identity = 43/131 (32.82%), Postives = 64/131 (48.85%), Query Frame = 1 Query: 205 PKTNVHSKDIVHSPENNLCARLYIPNQRQNKKLPLLVYFHGGGFCIETAFSPTYHNYLNTLVSEANVIAVSVDYRRAPENPVPCAHDDSWTALKWVASHVNGEGPEDWLNCF-ADFQRVFFSGDSAGANIA 594 P T+ + + + NN+ R+Y+P ++ L Y HGGG+C+ +A Y +V+ VS +YR APE P +D + ALKW +D L + D +RV SGDSAG N+A Sbjct: 71 PPTSDENVTVTETTFNNVPVRVYVPKRKSKTLRRGLFYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWFLR-------QDVLEKYGVDPERVGVSGDSAGGNLA 194 The following BLAST results are available for this feature:
BLAST of FC869313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869313 ID=FC869313; Name=FC869313; organism=Citrus clementina; type=EST; length=758bpback to top |