FC870530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.305e-37 Identity = 77/89 (86.52%), Postives = 82/89 (92.13%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKT 270 TVRL+ ASYDEIKAAIK SEGKLKGILGYTEDDVVSTDF+GD+RSSIFDAKAGIALS FVKLVSWYDNEWGYS+RV+DLIVHMA T Sbjct: 251 TVRLEKPASYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDLIVHMAST 339
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 2.907e-37 Identity = 77/88 (87.50%), Postives = 82/88 (93.18%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 267 TVRL+ A+YDEIK AIK SEGKLKGILGYTEDDVVSTDFVGD+RSSIFDAKAGIALS KFVKLVSWYDNEWGYS+RVVDLIVHM+K Sbjct: 250 TVRLEKAATYDEIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDKFVKLVSWYDNEWGYSSRVVDLIVHMSK 337
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_ANTMA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Antirrhinum majus GN=GAPC PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.907e-37 Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 273 TVRL+ A+Y++IKAAIK SEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIAL+ FVKLVSWYDNEWGYSTRVVDLIVHMA Q Sbjct: 248 TVRLEKKATYEQIKAAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIVHMASVQ 337
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_TOBAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Nicotiana tabacum GN=GAPC PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.476e-37 Identity = 76/87 (87.36%), Postives = 81/87 (93.10%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMA 264 TVRL+ ASYD+IKAAIK SEGKLKGILG+TEDDVVSTDFVGDSRSSIFDAKAGIALSK FVKLVSWYDNEWGYS+RV+DLI HMA Sbjct: 237 TVRLEKEASYDDIKAAIKEESEGKLKGILGFTEDDVVSTDFVGDSRSSIFDAKAGIALSKNFVKLVSWYDNEWGYSSRVIDLICHMA 323
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_PINSY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pinus sylvestris GN=GAPC PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 6.476e-37 Identity = 77/90 (85.56%), Postives = 82/90 (91.11%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 273 TVRL+ A+YDEIKAAIKA SEG LKGILGYTED VVSTDF+GDSRSSIFDA+AGIALS FVKLVSWYDNEWGYS+RVVDLIVHMA TQ Sbjct: 251 TVRLEKSATYDEIKAAIKAESEGNLKGILGYTEDAVVSTDFIGDSRSSIFDAQAGIALSDNFVKLVSWYDNEWGYSSRVVDLIVHMAATQ 340
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.105e-36 Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 267 TVRL+ A+YDEIK AIK S+GKLKGILGYTEDDVVSTDFVGD+RSSIFDAKAGIALS FVKLVSWYDNEWGYSTRVVDLI+HM+K Sbjct: 250 TVRLEKAATYDEIKKAIKEESQGKLKGILGYTEDDVVSTDFVGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSTRVVDLIIHMSK 337
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_PEA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Pisum sativum GN=GAPC1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 3.214e-36 Identity = 76/88 (86.36%), Postives = 82/88 (93.18%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAK 267 TVRL+ A+YDEIKAAIK SEGKLKGILGYTEDDVVSTDF+GD+RSSIFDAKAGIAL+ KFVKLVSWYDNE GYSTRVVDLIVH+AK Sbjct: 249 TVRLEKAATYDEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIALNDKFVKLVSWYDNELGYSTRVVDLIVHIAK 336
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 9.352e-36 Identity = 74/90 (82.22%), Postives = 80/90 (88.89%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 273 TVR + ASYD+IK AIKA SEGKLKGI+GY E+D+VSTDFVGDSRSSIFDAKAGIAL+ FVKLVSWYDNEWGYS RVVDLI HMAKTQ Sbjct: 248 TVRTEKAASYDDIKKAIKAASEGKLKGIMGYVEEDLVSTDFVGDSRSSIFDAKAGIALNDHFVKLVSWYDNEWGYSNRVVDLIRHMAKTQ 337
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_RANAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ranunculus acris GN=GAPC PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 9.352e-36 Identity = 74/90 (82.22%), Postives = 82/90 (91.11%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKTQ 273 TVRL+ A+Y +IKAAIK SEGKLKGILGYTEDDVVSTDF+GD+RSSIFDAKAGIAL+ VKLVSWYDNEWGYS+RVVDLIVHM+KTQ Sbjct: 249 TVRLEKKATYADIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDNRSSIFDAKAGIALNDNCVKLVSWYDNEWGYSSRVVDLIVHMSKTQ 338
BLAST of FC870530 vs. ExPASy Swiss-Prot
Match: G3PC_TAXBA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Taxus baccata PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.595e-35 Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 1 Query: 4 TVRLDPYASYDEIKAAIKALSEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALSKKFVKLVSWYDNEWGYSTRVVDLIVHMAKT 270 TV+L+ A+Y EIKAAIK SEGKLKGILGYTEDDVVSTDF+GDSRSSIFDAKAGIAL+ FVKLVSWYDNEWGYS+RV+DLIVHM T Sbjct: 251 TVKLEKSATYGEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSSRVIDLIVHMDST 339 The following BLAST results are available for this feature:
BLAST of FC870530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 228
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870530 ID=FC870530; Name=FC870530; organism=Citrus clementina; type=EST; length=593bpback to top |