FC870539

Overview
NameFC870539
Unique NameFC870539
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length855
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 404.831 bits (1039), Expect = 3.104e-112
Identity = 192/217 (88.48%), Postives = 206/217 (94.93%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 654
            VEWYG NAKLRELVNLVVV GDRRKESKDLEE+AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDT+GAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LVDFFEKCK DP++WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLA E
Sbjct:  589 VEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTRGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVDFFEKCKLDPTHWDKISKAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAAE 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 402.519 bits (1033), Expect = 1.540e-111
Identity = 194/217 (89.40%), Postives = 207/217 (95.39%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 654
            VEWYG NAKLRELVNLVVV GDRRKESKDLEE+AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDTKGAFVQPA+YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKISLGGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  589 VEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYELIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISLGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 2.627e-111
Identity = 193/217 (88.94%), Postives = 206/217 (94.93%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 654
            VEWYG NAKLRELVNLVVV GDRRKESKDLEE+AEMKKMYSLI+ YKLNGQFRWISSQMNRVRNGELYR I DTKGAFVQPA+YEAFGLTVVEAMTCGLPTFATC GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK K DPS+WDKIS  GL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDR ESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  589 VEWYGKNAKLRELVNLVVVAGDRRKESKDLEEKAEMKKMYSLIETYKLNGQFRWISSQMNRVRNGELYRVIADTKGAFVQPAVYEAFGLTVVEAMTCGLPTFATCNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKVDPSHWDKISQAGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRRESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1 PE=2 SV=3)

HSP 1 Score: 399.823 bits (1026), Expect = 9.984e-111
Identity = 188/215 (87.44%), Postives = 204/215 (94.88%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 648
            VEWYG N +LREL NLVVVGGDRRKESKD EE+AEMKKMY LI++YKLNGQFRWISSQM+RVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHG+QAA+ L DFF KCK DPS+WD+IS GGL+RIEEKYTW+IYSQRLLTLTGVYGFWKHVSNLDRLE+RRYLEMFYALKYR LA++VPLA
Sbjct:  591 VEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLA 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 397.897 bits (1021), Expect = 3.794e-110
Identity = 193/217 (88.94%), Postives = 204/217 (94.01%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 654
            VEWYG NAKLRELVNLVVV GDRRKESKDLEE AEMKKMY LI+ YKLNGQFRWISSQMNRVRNGELYR ICDTKGAFVQPA+YEAFGLTVVEAM  GLPTFAT  GGPAEIIV+GKSG+HIDPYHG++AA++LV+FFEK KADPS+WDKIS GGL+RIEEKYTW IYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE
Sbjct:  589 VEWYGKNAKLRELVNLVVVAGDRRKESKDLEEIAEMKKMYGLIETYKLNGQFRWISSQMNRVRNGELYRVICDTKGAFVQPAVYEAFGLTVVEAMATGLPTFATLNGGPAEIIVHGKSGFHIDPYHGDRAADLLVEFFEKVKADPSHWDKISQGGLQRIEEKYTWTIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUS1_DAUCA (Sucrose synthase isoform 1 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 393.275 bits (1009), Expect = 9.345e-109
Identity = 189/215 (87.91%), Postives = 198/215 (92.09%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 648
            VEWY  + KLRELVNLVVVGGDRRKESKDLEEQA+MKKMY LID YKLNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQ AE+LV+FFEKCK DPS WD IS GGLKRI+EKYTW+IYS+RLLTL GVYGFWKHVS LDRLE RRYLEMFYALKYRKLAESVPLA
Sbjct:  591 VEWYAKSPKLRELVNLVVVGGDRRKESKDLEEQAQMKKMYELIDTYKLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATLHGGPAEIIVHGKSGFHIDPYHGEQVAELLVNFFEKCKTDPSQWDAISAGGLKRIQEKYTWQIYSERLLTLAGVYGFWKHVSKLDRLEIRRYLEMFYALKYRKLAESVPLA 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUS1_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 5.669e-106
Identity = 183/217 (84.33%), Postives = 197/217 (90.78%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 654
            VEWY  N +LR LVNLVVVGGDRRKESKDLEEQAEMKKMY LI+ + LNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK DPS+W+ IS+GGLKRIEEKYTW+IYS+ LLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  589 VEWYAKNPRLRGLVNLVVVGGDRRKESKDLEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKDPSHWETISMGGLKRIEEKYTWQIYSESLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUSY_SOLLC (Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 382.489 bits (981), Expect = 1.650e-105
Identity = 182/217 (83.87%), Postives = 197/217 (90.78%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 654
            VEWY  N +LR LVNLVVVGGDRRKESKDLEEQAEMKKMY LI+ + LNGQFRWISSQMNRVRNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEIIV+GKSG+HIDPYHGEQAA++L DFFEKCK +PS+W+ IS GGLKRI+EKYTW+IYS+RLLTL  VYGFWKHVS LDRLE RRYLEMFYALKYRK+AE+VPLA E
Sbjct:  589 VEWYAKNPRLRGLVNLVVVGGDRRKESKDLEEQAEMKKMYELIETHNLNGQFRWISSQMNRVRNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIVHGKSGFHIDPYHGEQAADLLADFFEKCKKEPSHWETISTGGLKRIQEKYTWQIYSERLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKYRKMAEAVPLAAE 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUS2_SOLTU (Sucrose synthase OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 4.063e-104
Identity = 181/217 (83.41%), Postives = 196/217 (90.32%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 654
            VEWY  N +LRELVNLVVVGGDRRKESKDLEEQAEMKKMY LI  + LNGQFRWISSQMNRVRNGELYRYI DT+GAFVQPA YEAFGLTVVEAM+CGLPTFAT +GGPAEIIV+GKSG+ IDPYHGEQAA++L DFFEKCK DPS+W+ IS GGLKRI+EKYTW+IYS RLLTL  VYGFWKHVS LDRLE RRYLEMFYALK+RKLA+ VPLAVE
Sbjct:  589 VEWYAKNPRLRELVNLVVVGGDRRKESKDLEEQAEMKKMYELIKTHNLNGQFRWISSQMNRVRNGELYRYIADTRGAFVQPAFYEAFGLTVVEAMSCGLPTFATNQGGPAEIIVHGKSGFQIDPYHGEQAADLLADFFEKCKVDPSHWEAISEGGLKRIQEKYTWQIYSDRLLTLAAVYGFWKHVSKLDRLEIRRYLEMFYALKFRKLAQLVPLAVE 805          
BLAST of FC870539 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 6.930e-104
Identity = 183/218 (83.94%), Postives = 198/218 (90.83%), Query Frame = 1
Query:    4 VEWYGNNAKLRELVNLVVVGGDRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQ-PALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVE 654
            VEWYG N +LRELVNLVVV G+  KESKD EE+AEM KM+ LI+ YKLNGQFRWISSQMNRVRNGELYRYI DTKG     PA+YEAFGLTVVE+MTCGLPTFATCKGGPAEIIV+GKSG+HIDPYHGEQAA++LVDFFEK KADPS+W KISLGGL+RI EKYTWKIYS+RLLTLTGV  FWKHVSNLDRLESRRY+EMFYALKYRKLAESVPLAVE
Sbjct:  586 VEWYGKNTRLRELVNLVVVAGNLEKESKDNEEKAEMTKMHGLIETYKLNGQFRWISSQMNRVRNGELYRYIADTKGGLCAGPAIYEAFGLTVVESMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGEQAAQLLVDFFEKTKADPSHWAKISLGGLQRIHEKYTWKIYSERLLTLTGVTAFWKHVSNLDRLESRRYIEMFYALKYRKLAESVPLAVE 803          
The following BLAST results are available for this feature:
BLAST of FC870539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUSY_SOYBN3.104e-11288.48Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUSY_VICFA1.540e-11189.40Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_PHAAU2.627e-11188.94Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUS1_ARATH9.984e-11187.44Sucrose synthase 1 OS=Arabidopsis thaliana GN=SUS1... [more]
SUSY_MEDSA3.794e-11088.94Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]
SUS1_DAUCA9.345e-10987.91Sucrose synthase isoform 1 OS=Daucus carota PE=2 S... [more]
SUS1_SOLTU5.669e-10684.33Sucrose synthase OS=Solanum tuberosum PE=2 SV=1[more]
SUSY_SOLLC1.650e-10583.87Sucrose synthase OS=Solanum lycopersicum PE=2 SV=1[more]
SUS2_SOLTU4.063e-10483.41Sucrose synthase OS=Solanum tuberosum PE=3 SV=1[more]
SUSY_ALNGL6.930e-10483.94Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3CG09ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA3CG09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870539 ID=FC870539; Name=FC870539; organism=Citrus clementina; type=EST; length=855bp
GGGGTGGAGTGGTATGGAAATAATGCTAAGCTACGTGAGTTGGTGAACTT
AGTCGTAGTGGGTGGCGATAGGAGAAAGGAGTCCAAGGACTTGGAAGAAC
AGGCTGAAATGAAGAAGATGTATTCCCTCATTGATCAATACAAATTGAAT
GGCCAGTTCCGATGGATCTCTTCTCAGATGAATCGGGTCAGGAACGGTGA
ATTGTACCGGTACATTTGTGATACAAAGGGAGCTTTTGTGCAACCTGCAC
TGTATGAGGCCTTTGGCTTGACTGTTGTTGAGGCCATGACCTGTGGATTG
CCAACATTTGCAACTTGCAAGGGTGGCCCCGCTGAGATTATCGTTAACGG
GAAATCTGGCTACCACATTGATCCTTACCATGGTGAGCAGGCTGCTGAGA
TCCTTGTTGACTTCTTTGAGAAGTGCAAGGCAGATCCCTCATACTGGGAC
AAGATATCACTGGGTGGCCTGAAGCGTATTGAAGAGAAGTATACATGGAA
AATTTACTCTCAGAGGCTTCTGACCCTGACTGGAGTCTATGGGTTCTGGA
AACATGTATCTAACCTTGATCGGCTTGAGAGCCGTCGATACCTTGAAATG
TTTTATGCTCTCAAGTACCGTAAGCTGGCTGAATCTGTTCCTCTGGCTGT
GGAGTAAATGGACATTGAGGAAGCTCTCAGGGTGGTTGGTCCGAGTGGAG
ATTTCTCGAGTTGTGGAGAATAATGTCCCTTCTGGGATTGCGATTGGACA
AAGACTTTTTTACCGGCTTAAATTTTCTTTTTTCAATTTTTTTTTTCCTT
TTTGCATTTCTCAGCATTGTTTGTACTTTGGGTGTTGCACCCTCATCAAT
TCCAT
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