FC870695
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RK191_ARATH (50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana GN=At4g17560 PE=2 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.239e-45 Identity = 91/121 (75.21%), Postives = 101/121 (83.47%), Query Frame = 2 Query: 185 RKPRVKLGDIMGILNKRAIEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 547 RKPR+KLGD+MGILN++AIE +E RP+P+IRTGD+VEIKLEVPEN+RRLSIYKGIVMSRQN VEIVFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK Sbjct: 105 RKPRIKLGDVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 225
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RK192_ARATH (50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana GN=At5g47190 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.370e-44 Identity = 91/122 (74.59%), Postives = 100/122 (81.97%), Query Frame = 2 Query: 182 PRKPRVKLGDIMGILNKRAIEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 547 P K RVKLGDIMG+LNK+AIE +E+ RP+P +RTGD+VEIKLEVPEN+RRLSIYKGIVMSRQN VEIVFP+YSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK Sbjct: 108 PWKTRVKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 229
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RK19_SPIOL (50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea GN=RPL19 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.160e-43 Identity = 88/122 (72.13%), Postives = 100/122 (81.97%), Query Frame = 2 Query: 182 PRKPRVKLGDIMGILNKRAIEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 547 PR+ RVKLGDIMGILNK+A+ A+E RP+P IRTGD+V+I+LEVPEN+RRLS+YKGIV+SRQN VEIVFPLYSPNIKEIKVVSHRKVR+ARLYYLRDKLPRLSTFK Sbjct: 112 PRQQRVKLGDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGIVISRQNAGIHTTIRIRRIIAGVGVEIVFPLYSPNIKEIKVVSHRKVRKARLYYLRDKLPRLSTFK 233
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RL19_MOOTA (50S ribosomal protein L19 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplS PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.333e-14 Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 2 Query: 239 IEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK 547 +E + IPD R GD V + ++V E NR R+ I++G+V+ R+ VE +FPL+SP ++ I+VV H KVRRA+LYYLR+++ + + K Sbjct: 7 LEKEQLRTDIPDFRPGDTVRVHVKVVEGNRERIQIFEGVVIGRRGRGINETFTVRRVSYGVAVERIFPLHSPRLERIEVVRHGKVRRAKLYYLRERVGKAARIK 110
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RL19_MAGSA (50S ribosomal protein L19 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rplS PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13 Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 2 Query: 209 DIMGILNKRAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDK 523 +I+ L K IE ++R +P GD +++ ++V E NR R+ Y+G+ ++R+N VE +FPLYSPNI I+VV VRRA+LYYLRD+ Sbjct: 3 NIIEQLEKEQIEKLTADRGVPSFAPGDTLKVNVKVIEGNRERVQAYEGVCIARKNDGLNSSFVVRKISYGEGVERIFPLYSPNIASIEVVRRGDVRRAKLYYLRDR 108
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RL19_CORJK (50S ribosomal protein L19 OS=Corynebacterium jeikeium (strain K411) GN=rplS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.639e-13 Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = 2 Query: 215 MGILNKRAIEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK*R 553 M IL+K ++A++ IP+ R GD +++ ++V E ++ RL +++G+V+ RQN VE FP++SPNI I V+S KVRRA+LYYLR++ + + K R Sbjct: 1 MHILDK--VDAAQLRDDIPEFRAGDTLDVHVKVIEGSKSRLQVFRGVVIRRQNSGIRETFTIRKVSFGIGVERTFPVHSPNIDRIDVLSRGKVRRAKLYYLRERRGKAARIKER 112
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RL19_ALKMQ (50S ribosomal protein L19 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplS PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.639e-13 Identity = 35/99 (35.35%), Postives = 61/99 (61.62%), Query Frame = 2 Query: 233 RAIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKL 526 + I+A++ ++ I D TGD +++ + + E R R+ +++GIV+ RQ VE FP++SP I++I++V H KVRRAR++YLRD++ Sbjct: 5 KGIDAAQLKKDIIDFNTGDTIKVHVRIKEGTRERIQVFEGIVIKRQGGGIAETFTVRRISYGVGVERTFPVHSPKIEKIEIVKHGKVRRARIFYLRDRI 103
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RL19_NOSP7 (50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=rplS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12 Identity = 40/108 (37.04%), Postives = 64/108 (59.26%), Query Frame = 2 Query: 233 RAIEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLRDKLPRLSTFK*R 553 R+IEA + + +PDI GD V++ +++ E + R+ Y+G+V++++N VE VF L+SP I IKV+ KVRRA+LYYLRD++ + + K R Sbjct: 8 RSIEAEQLKSNLPDIYVGDTVKVGVKIKEGEKYRVQPYEGVVIAKRNGGINETITVRKVFQGVGVERVFLLHSPRIDSIKVLRRGKVRRAKLYYLRDRVGKATRIKQR 115
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RL19_LACLS (50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rplS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12 Identity = 36/95 (37.89%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 236 AIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 517 +I A++ IPD R GD V + +V E R R+ I++G+V++R+N VE +FP+++P +++I+V+ H KVRRA+LYYLR Sbjct: 6 SINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISNGVGVERIFPVHTPRVEKIEVIRHGKVRRAKLYYLR 100
BLAST of FC870695 vs. ExPASy Swiss-Prot
Match: RL19_LACLM (50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rplS PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.383e-12 Identity = 36/95 (37.89%), Postives = 58/95 (61.05%), Query Frame = 2 Query: 236 AIEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNXXXXXXXXXXXXXXXXXVEIVFPLYSPNIKEIKVVSHRKVRRARLYYLR 517 +I A++ IPD R GD V + +V E R R+ I++G+V++R+N VE +FP+++P +++I+V+ H KVRRA+LYYLR Sbjct: 6 SINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISNGVGVERIFPVHTPRVEKIEVIRHGKVRRAKLYYLR 100 The following BLAST results are available for this feature:
BLAST of FC870695 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870695 ID=FC870695; Name=FC870695; organism=Citrus clementina; type=EST; length=773bpback to top |