FC870699
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_STRP1 (DNA repair protein radA homolog OS=Streptococcus pyogenes serotype M1 GN=radA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.463e-20 Identity = 55/131 (41.98%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 15 GIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKSAEKSLATLGFEQMEFIGCKNLKEVINVVFT 407 G+ +R +I++VL K+ GL LQ +L GV L E A DLAVA AI SS+ E P AF+GEIGL GE+R V+R+E+R++ AKLG+ K PK+A + + + +E +G + +V+N VF+ Sbjct: 325 GLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTSPQEAFLGEIGLTGEIRRVTRIEQRINEAAKLGFTKVYAPKNALQGIDIP--QGIEVVGVTTVGQVLNAVFS 453
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_STRP3 (DNA repair protein radA homolog OS=Streptococcus pyogenes serotype M3 GN=radA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.696e-19 Identity = 54/131 (41.22%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 15 GIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKSAEKSLATLGFEQMEFIGCKNLKEVINVVFT 407 G+ +R +I++VL K+ GL LQ +L GV L E A DLAVA AI SS+ E P AF+GEIGL GE+R V+R+E+R++ AKLG+ K PK+A + + + +E +G + +V+ VF+ Sbjct: 325 GLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTSPQEAFLGEIGLTGEIRRVTRIEQRINEAAKLGFTKVYAPKNALQGIDI--SQGIEVVGVTTVGQVLKAVFS 453
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_STRP8 (DNA repair protein radA homolog OS=Streptococcus pyogenes serotype M18 GN=radA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.215e-19 Identity = 54/131 (41.22%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 15 GIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKSAEKSLATLGFEQMEFIGCKNLKEVINVVFT 407 G+ +R +I++VL K+ GL LQ +L GV L E A DLAVA AI SS+ E P AF+GEIGL GE+R V+R+E+R++ AKLG+ K PK+A + + + +E +G + +V+ VF+ Sbjct: 325 GLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTSPQEAFLGEIGLTGEIRRVTRIEQRINEAAKLGFTKVYAPKNALQGIDIP--QGIEVVGVTTVGQVLKAVFS 453
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_STRP6 (DNA repair protein radA homolog OS=Streptococcus pyogenes serotype M6 GN=radA PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.215e-19 Identity = 54/131 (41.22%), Postives = 80/131 (61.07%), Query Frame = 3 Query: 15 GIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKSAEKSLATLGFEQMEFIGCKNLKEVINVVFT 407 G+ +R +I++VL K+ GL LQ +L GV L E A DLAVA AI SS+ E P AF+GEIGL GE+R V+R+E+R++ AKLG+ K PK+A + + + +E +G + +V+ VF+ Sbjct: 325 GLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKEKPTSPQEAFLGEIGLTGEIRRVTRIEQRINEAAKLGFTKVYAPKNALQGIDIP--QGIEVVGVTTVGQVLKAVFS 453
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_ECOLI (DNA repair protein radA OS=Escherichia coli (strain K12) GN=radA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.099e-18 Identity = 47/128 (36.72%), Postives = 78/128 (60.94%), Query Frame = 3 Query: 15 GIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKSAEKSLATLGFEQMEFIGCKNLKEVINV 398 G+ +R ++++VL + GL++ + +F+NVV GV +TET+ DLA+ A+ SS + P+P + GE+GL GE+R V ++R+S AK G+R+ IVP + A E M+ G K L + ++V Sbjct: 332 GLEQNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAP---EGMQIFGVKKLSDALSV 456
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_MYCTU (DNA repair protein radA homolog OS=Mycobacterium tuberculosis GN=radA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.436e-18 Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 9 VNGIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKS 317 V+GIH +RA MI +VL K A L + N I+L+ V G+ LTE + DLAVA A+ S++ P+P + IGE+GL G++R V+ M +R+S A+ G+ +VP S Sbjct: 326 VSGIHQARAAMIAAVLEKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAARQGFTIALVPPS 428
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_MYCBO (DNA repair protein radA homolog OS=Mycobacterium bovis GN=radA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.436e-18 Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 9 VNGIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKS 317 V+GIH +RA MI +VL K A L + N I+L+ V G+ LTE + DLAVA A+ S++ P+P + IGE+GL G++R V+ M +R+S A+ G+ +VP S Sbjct: 326 VSGIHQARAAMIAAVLEKHARLAIAVNDIYLSTVGGMRLTEPSADLAVAIALASAYANLPLPTTAVMIGEVGLAGDIRRVNGMARRLSEAARQGFTIALVPPS 428
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_LISMO (DNA repair protein radA homolog OS=Listeria monocytogenes GN=radA PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18 Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 15 GIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKSAE 323 GI ++ +I++VL K+ GL LQ +L GV L E A DLAVA ++ SS+ + P ++ FIGE+GL GE+R V+R+E+RV AKLG+++ +PK+ E Sbjct: 328 GIDYNKVSLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNE 430
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_LISIN (DNA repair protein radA homolog OS=Listeria innocua GN=radA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.124e-18 Identity = 45/103 (43.69%), Postives = 68/103 (66.02%), Query Frame = 3 Query: 15 GIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKSAE 323 GI ++ +I++VL K+ GL LQ +L GV L E A DLAVA ++ SS+ + P ++ FIGE+GL GE+R V+R+E+RV AKLG+++ +PK+ E Sbjct: 328 GIDYNKVSLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCFIGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNE 430
BLAST of FC870699 vs. ExPASy Swiss-Prot
Match: RADA_HAEIN (DNA repair protein radA homolog OS=Haemophilus influenzae GN=radA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.215e-17 Identity = 45/129 (34.88%), Postives = 77/129 (59.69%), Query Frame = 3 Query: 15 GIHASRADMIISVLMKQAGLKLQENAIFLNVVSGVALTETAGDLAVAAAICSSFLEFPIPNSIAFIGEIGLGGELRMVSRMEKRVSTVAKLGYRKCIVPKSAEKSLATLGFEQMEFIGCKNLKEVINVV 401 G+ +R ++++VL + GL++ + +F+NVV GV ++ET+ DLA+ A+ SSF P+P + GE+GL GE+R V ++R+S AK G+++ IVP + A E M+ K L + + V+ Sbjct: 330 GLEQNRLALLLAVLHRHGGLQMADQDVFVNVVGGVKVSETSADLALLLALISSFRNRPLPQDLVIFGEVGLAGEIRPVPSGQERISEAAKHGFKRAIVPFGNKPKSAV---ENMQVFTVKKLTDALAVL 455 The following BLAST results are available for this feature:
BLAST of FC870699 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC870699 ID=FC870699; Name=FC870699; organism=Citrus clementina; type=EST; length=608bpback to top |