FC870700

Overview
NameFC870700
Unique NameFC870700
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length866
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 9.006e-67
Identity = 115/177 (64.97%), Postives = 147/177 (83.05%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L+   L+W R+LF+K+EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKG+VTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD + +  S++ELH+LL KP L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALFNKLLDWFRALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.176e-66
Identity = 116/177 (65.54%), Postives = 145/177 (81.92%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKG+VTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.176e-66
Identity = 116/177 (65.54%), Postives = 145/177 (81.92%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKG+VTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.176e-66
Identity = 116/177 (65.54%), Postives = 145/177 (81.92%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKG+VTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.620e-66
Identity = 115/177 (64.97%), Postives = 145/177 (81.92%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKG+VTIK+WD+GGQPR+RSMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 2.620e-66
Identity = 114/177 (64.41%), Postives = 147/177 (83.05%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L+   L+W ++LF+K+EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKG+VTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD + +  S++ELH+LL KP L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 IALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8B_BOVIN (ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.422e-66
Identity = 115/177 (64.97%), Postives = 145/177 (81.92%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKG+VTIK+WD+GGQPRF+SMWERYCR V+AIVY++DAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.422e-66
Identity = 116/177 (65.54%), Postives = 145/177 (81.92%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L    L+W +SLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKG+VTIK+WD+GGQPRFRSMWERYCR V+AIVY+VDAAD + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALINRLLDWFKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 7.624e-66
Identity = 114/177 (64.41%), Postives = 146/177 (82.49%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L+   L+W ++LF+K+EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKG+VTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD D +  S++ELH+LL K  L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGALDEKELIERMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
[Close]
BLAST of FC870700 vs. ExPASy Swiss-Prot
Match: ARL8B_PONAB (ADP-ribosylation factor-like protein 8B OS=Pongo abelii GN=ARL8B PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.300e-65
Identity = 115/177 (64.97%), Postives = 144/177 (81.36%), Query Frame = 1 
Query:   70 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGSVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDWLV 600
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKG+VTIK+WD+GGQPRFRSMWERYCR V+AIVY++DAA  + +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + WL+
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAAYREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLI 178
The following BLAST results are available for this feature:
BLAST of FC870700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
ARL8A_CHICK9.006e-6764.97ADP-ribosylation factor-like protein 8A OS=Gallus ... [more]
ARL8B_RAT1.176e-6665.54ADP-ribosylation factor-like protein 8B OS=Rattus ... [more]
ARL8B_MOUSE1.176e-6665.54ADP-ribosylation factor-like protein 8B OS=Mus mus... [more]
ARL8B_HUMAN1.176e-6665.54ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
ARL8B_MACFA2.620e-6664.97ADP-ribosylation factor-like protein 8B OS=Macaca ... [more]
ARL8A_HUMAN2.620e-6664.41ADP-ribosylation factor-like protein 8A OS=Homo sa... [more]
ARL8B_BOVIN3.422e-6664.97ADP-ribosylation factor-like protein 8B OS=Bos tau... [more]
AR8BA_DANRE3.422e-6665.54ADP-ribosylation factor-like protein 8B-A OS=Danio... [more]
ARL8A_XENTR7.624e-6664.41ADP-ribosylation factor-like protein 8A OS=Xenopus... [more]
ARL8B_PONAB1.300e-6564.97ADP-ribosylation factor-like protein 8B OS=Pongo a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA3DH06ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA3DH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870700 ID=FC870700; Name=FC870700; organism=Citrus clementina; type=EST; length=866bp
GCGGGGGCTTTTTCCCAGCTTTTATACTTCAAAGGCGAAACCCTAGCTTC
TTATTTTGTCGAATAAAAGATGGGATTATGGGAAGCTTTTCTCAACTGGC
TTCGAAGTCTCTTCTTTAAACAAGAAATGGAGCTATCTTTGATAGGGCTT
CAGAATGCAGGCAAGACGTCCCTTGTGAATGTTATTGCAACTGGTGGATA
TAGTGAAGATATGATCCCAACAGTAGGATTTAATATGAGGAAAGTGACTA
AGGGGAGTGTCACAATAAAGCTGTGGGATCTTGGAGGCCAACCACGGTTT
CGCAGTATGTGGGAGAGATACTGTCGTGCAGTTTCAGCTATTGTTTACGT
TGTTGATGCTGCTGATTATGATAACTTGCCTGTGTCAAGAAGTGAACTCC
ATGACTTGTTAAGTAAACCCTCGCTGAATGGTATCCCATTGCTGGTGCTG
GGAAACAAGATTGATAAACCAGAAGCCTTGTCTAAAGAGGATCTGATGGA
ACAAATGGGGCTGAAGTCCATTACCGATAGAGAAGTTTGTTGCTACATGA
TTTCATGCAAAAACTCTACCAACATTGACACGGTTATTGATTGGCTTGTA
AAGCATTCAAAATCAAAGAGTTGAGTTTCTTCCTGTAGTTTTGAACTACA
TGGGAGCCTGTTTTCAACAACTGATTCAGGATGATTTGAGTGAGCCGTAC
TGTTAGTCTGCTCGGGTCAGTCGATGTGTGATCATAGTTTTTTATTTCGA
CTTGGCTTTTTATCGTAAATCATAATTTGTTTAGTTTTACATCAGGAATC
TGGGAACACCCATGTATTAATTGCTGAGATACCAAGTGATCATACTTTCA
TGTATAGATCTAATAT
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