FC870715

Overview
NameFC870715
Unique NameFC870715
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length803
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC870715 vs. ExPASy Swiss-Prot
Match: Y2992_ARATH (Uncharacterized protein At2g39920 OS=Arabidopsis thaliana GN=At2g39920 PE=2 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 8.639e-29
Identity = 77/207 (37.20%), Postives = 114/207 (55.07%), Query Frame = 1 
Query:  178 MSAYAHQMXXXXXXXXXXXXXXXXHGSQYTVESGFYMTTFAAVIFXXXXXXXXXXXXXXXXXXAVMLQSCQNRSSGVVELTKSSGDNNYCKLFALHAELNSLEADN-LPEICRGLAIRYIKEGQFARDLNLSIQIVESYFNTLTPSYNGLDVVLMDIDDIFASSSKYSNLLIDRVNVHGYIECIEEAKHLKHMFTLKLFMKLQVRGW 795
            MSAY H M                 GS+Y++ESG YMT+ AA IF                  + MLQSC+NR+  +VE  +      YCK+ +LH++LNSL+ ++ LP +CR +A+  IK+G + R+LN +IQ+  +YF T+ P  +  DVV++DIDD        +NLL        Y++ IEEAKH K +  L L+ KL+ +G+
Sbjct:    1 MSAYTHPMERELSGLSSRGNSEL--GSRYSIESGCYMTSLAASIFIASLVTFGVLMITLLIALSTMLQSCENRNIAIVEAQRLDESFGYCKILSLHSQLNSLDEESELPLLCRDVALHRIKQGIYLRELNFTIQMALTYFQTIKPMNDNCDVVVIDIDD--------TNLL---EQDSYYMKYIEEAKHQKSILILALYSKLRSQGY 194
The following BLAST results are available for this feature:
BLAST of FC870715 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2992_ARATH8.639e-2937.20Uncharacterized protein At2g39920 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA2BB05ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2BB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870715 ID=FC870715; Name=FC870715; organism=Citrus clementina; type=EST; length=803bp
GGGTAACTTACTTTTCTGTAGGTTTAATAATGATCGGCAAAAGAAGCTGA
GATGAGATGCTGTTGTTGGCTCGTAGCATGGTAGATGAATGTTATTGTGA
CCCTTCTATCACCCAAAGGGATCTTTAGATATCCTAGCTTTTAACTTGAG
CTGGTGAATGCTGGTTAGATTACCAAAATGTCAGCTTACGCTCATCAAAT
GGAGCGGCAGCTCTCCTCCCAGAGTCTCTCGAGTAGAGGAGGCTCTGAGC
ATGGAAGCCAATATACGGTTGAGTCCGGGTTCTACATGACAACTTTTGCT
GCAGTAATCTTCATTGGTGGTCTTATAACAGTTGGAGTTCTGTTAATAAC
CTTGCTGGTTACATTGGCTGTCATGTTGCAATCCTGTCAAAATAGGAGTT
CAGGAGTTGTTGAACTTACGAAATCAAGCGGTGATAACAATTATTGCAAG
CTATTTGCTCTACATGCCGAGCTTAACAGCTTGGAAGCAGATAACTTGCC
AGAAATTTGCAGGGGTCTTGCTATTCGATACATCAAAGAAGGACAATTTG
CTAGAGATCTAAACCTTTCAATACAGATTGTTGAAAGCTACTTTAATACT
CTTACACCATCATACAATGGTCTAGATGTAGTTTTAATGGACATAGATGA
TATTTTCGCTTCAAGTTCCAAGTACAGTAATCTATTAATAGACAGAGTTA
ATGTACATGGGTATATTGAGTGCATTGAAGAGGCCAAACATCTGAAGCAC
ATGTTTACATTGAAACTATTCATGAAACTTCAAGTCAGGGGATGGCCTGT
GAT
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